LOC122342682


Basic Information

Item Value
gene id LOC122342682
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 10722325 ~ 10726265 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236693.1
aaattcttgGATTTtcaagtgtgtgtttgctgacAGGACTGAGCGTTTGTTAATGAAGAGATGGACATGGCAGAGAAAACaattcttttctgttttctattaaaaGgtgTTTGTTGTAATGATTTCAGCATCAGTCTGCCAGAGAAGATTGAAGCTCTCAGTGGATCCTGTGTGATCATAAACTGCTCTTTTGAGATTAGAGACGATTATGATCAATTCCTCAATGAGAAAGCTGCTACAGGAGTTTGGCTCAAAGATGGGACAGAGACAGATATCAATCAAGTGTTTAACTCCAGAAATCCCAAACCTGGTCACTTGAGTGGAAAAATAACTGGAAATCTACACGAAAAGAACTGCACAACTATCTTTTATGATGTTAGTTCAAGAGACAGTGGAAGTTATTACTTCAGGATTATGAGTGAAGATCTGAAAAACACCTACACACAATCCTTCTCCACTATAAATGTCATTGAGTCTCCTCCTAAACCCAGAGTGCAGCTGTATGTGGATGAGGAGAAGAGGCAGGATCAGGAGGAGGTGTTGGAGGGGAGCTCTGTGAGTCTGCGCTGCTCTGCTGAGACTCTCTGCTCCTCTTCTCCAGCGACTCTCACATGGAGCTCCACTCCCAGAATCCCCCTCAATGACAGCAGCAGACTACAGGAGCTCATCTCTGATCTCAAGTTCACTGCTACTCACCGAGAGCACAGAGTCACTTTCACCTGCACTATAACCTACCAGATACAGGACCAGAACAAAACAGCTCAGGACAGCATCACGCTACACGTTCAGTatTCTCCTAAAGACACATCAGTGTCTGTGTTTCCCTCCAGCTCTGTGTTGGAGGGCAGTTCAGTGACTCTGTCCTGCAGCAGTGAATCAAATCCAGCAGTGATGAACTACACCTggtccagagagagagaaggacagTTGGAGCAGCTGCAGACGGGACAAAATCTTACCTTCAATAGGACCGACCCGACACACAGAGGCTGGTACCACTGTACAGCTCAGAACCAACATGGAGCCCAAAACTCATCTGTGATGCTGGACATTCATCGTTCGAATCATTTCTCTGTGCTGATTGGAGTTGCTGTCGTGGCTCTGGCGGTCGTGTTGTTGTGTGCCATTACATGTATCTGTGTACGaaaatggaAAGGAAAACTTCCAGAGACTACACAAGAGGGCATCAAGAGAAGAGATCAAGATACCAATGATGTGGCTGTTTATGCCATGATGTCTCCTGCTGGAGCCGCCGCAGAAAATCAAGACGCCGTCATTTATTCCCCCGTTGTCTTCACGAAAAAGACTAAATCGCAAGAGGTCAGGAGCGTTTCTTCACGTCATGCTTACTGCTCTGCGGCCCAGGACCGTTCTGAATCAGAAGAAAAGCTGAGCGAAGACTCCTCTCAGCTTTATGCAAAGGTTAATCGCCGTGACATTAGAAAACTGGAGACTTTGGCATTCCTCtattagctttttttcccataaaaatatatatttcagatactgtacatgtaaacaagagaaaaatgttaacatttagcCCCTCTATCGCCGACTCATTACACAATTTCAATTATATTCTGtgggttttattcatttgtttatattcgtataatcatataatcattctattcatcaatttaattgtattcattttctacatgtattatttaaacatttaaccttTTATGACCTCATGTGCAA

Function

GO:

id name namespace
GO:1990138 neuron projection extension biological_process
GO:0048588 developmental cell growth biological_process
GO:0048675 axon extension biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236693.1 True 1707 mRNA 0.43 7 10722325 10726265

Neighbor

gene id symbol gene type direction distance location
LOC122342683 NA coding upstream 2124 10717753 ~ 10720201 (+)
LOC122342684 NA coding upstream 5718 10714760 ~ 10716607 (+)
cacna1c cacna1c,LOC107590584,LOC107732972 coding upstream 79874 10528045 ~ 10642451 (+)
ccdc146 LOC107694170,LOC107738828,LOC107591091,LOC107732959 coding upstream 258708 10448279 ~ 10463617 (+)
ppp6r2a ppp6r2a,LOC107557302,LOC107699058,LOC107733000,LOC107694165,LOC107738817 coding upstream 324496 10382619 ~ 10397829 (+)
nav3 nav3,LOC107755908,LOC107680031 coding downstream 130820 10857085 ~ 10982814 (+)
syt1a syt1a,LOC107560302,LOC107694178,LOC107734425,LOC107755909,LOC107590640,LOC107680026 coding downstream 272664 10998929 ~ 11156744 (+)
myf6 LOC107755889,LOC107749082,LOC107694156,LOC107680015 coding downstream 598368 11324633 ~ 11326693 (+)
llph llph,LOC107755886,LOC107590743,LOC107694185,LOC107680014 coding downstream 847482 11573747 ~ 11575237 (+)
guca1a guca1a,LOC107590762,LOC107755893,LOC107590961 coding downstream 875936 11602201 ~ 11606571 (+)
G27731 NA non-coding upstream 62994 10648692 ~ 10659331 (+)
G27729 NA non-coding upstream 64184 10653704 ~ 10658141 (+)
G27651 NA non-coding upstream 356754 10287478 ~ 10365571 (+)
G27643 NA non-coding upstream 458125 10262869 ~ 10264200 (+)
G27562 NA non-coding upstream 850322 9686499 ~ 9872003 (+)
G27754 NA non-coding downstream 450159 11176424 ~ 11178043 (+)
G27760 NA non-coding downstream 452257 11178522 ~ 11179311 (+)
G27777 NA non-coding downstream 550164 11276429 ~ 11296804 (+)
G27778 NA non-coding downstream 570982 11297247 ~ 11300131 (+)
G27789 NA non-coding downstream 612076 11338341 ~ 11367704 (+)
LOC122342850 LOC107740709 other upstream 13378 10707132 ~ 10708947 (+)
zmp:0000000650 LOC107694155,LOC107589077,LOC107732968,LOC107680013,LOC107574990 other upstream 20122 10686097 ~ 10702203 (+)
rassf8b rassf8,rassf8b,LOC107590609,LOC107589039,LOC107738830 other upstream 47215 10662231 ~ 10675110 (+)
lrtm2a lrtm2a,LOC107738823,LOC107694175,LOC107590570,LOC107732983,LOC107589042,LOC107699047 other upstream 214771 10479441 ~ 10507554 (+)
lamtor4 si:dkey-159a18.7,lamtor4,LOC107590499,LOC107557308,LOC107694163,LOC107699063 other upstream 354400 10365712 ~ 10367925 (+)
myf5 LOC107560306,LOC107680018,LOC107749081 other downstream 605280 11331545 ~ 11334456 (+)
acss3 acss3,LOC107694183,LOC107755903,LOC107680029,LOC107749070,LOC107560301,LOC107590709 other downstream 659865 11386130 ~ 11416227 (+)
ndufb2 ndufb2,LOC107755897,LOC107578274,LOC107694192,LOC107590801,LOC107710676 other downstream 963049 11689314 ~ 11691129 (+)
gnai1 gnai1,LOC107590838,LOC100706147,LOC103382723,LOC106609493 other downstream 1070717 11796982 ~ 11815305 (+)
kin kin,LOC102791470 other downstream 2424471 13150736 ~ 13154358 (+)

Expression


Co-expression Network