metap2a (metap2a,LOC107689230,LOC107597011,LOC107755160,LOC106576295,LOC100194705)


Basic Information

Item Value
gene id metap2a
gene name metap2a,LOC107689230,LOC107597011,LOC107755160,LOC106576295,LOC100194705
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13423238 ~ 13432687 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236712.1
CACTCACTCAGCTGATTCGGCAGCTTTTCCGGGCTCCTCCCACAATGCATCGGTCCCTCTCCACTCGCGTTCGCGATCATGGAGGCGAACGGGACCGAGCCGCTGCCGGAGCAGCCAGGCGTGGACACGCTGATCCTTAACGGGGACGCGGCGGATCGAGAAGAAGTCGACCCcgccaagaagaagaagaagaagaagaagaaaagcaaGTCCGCCGCTTCCGCAGGACACAGCGAGCAGGGCGAGAACGGCGAGGCTGAGGTGAGGAAACAAACCGAGCAACAGAACCCAGATGAGAAAGATAGAGAAGAGGATGGAGAAGAAGGTGTCTCAGACGCTGAGGAAGCTGACAACGTCTctgggaaaaagaagaaaaagaagacaaagaaaaaaaaaggacCCAAAACCCAGACGGACCCTCCGTCCATCCCCATCTGCGATCTGTACCCCAGCGGTGTGTTTCCTGTGGGTCAGGAGTGTGAATACCCTCCATCACAGGATGGGCGTAGCGCCGCTTGGAGAATGAGCAACGATGAGAAGCAAGTGATGGATAAAGCCAACGAGGAGATGTGGAATGACTTCCGGCAGGCGGCCGAAGCTCATCGACAAGTGCGGCAGTATGTAAGGAGCTGGATCAAACCTGGAATGACTATGATTGACATCTGTGAGCGTCTGGAGGACTGCAGTAGGAAGCTGGTCAAAGAGGACGGTTTGAACGCGGGGCTGGCGTTTCCTACCGGCTGCTCGCTGAATAACTGTGCTGCTCACTACACCCCAAACGCCGGGGACCCTACTGTTCTCCAGTACGACGATGTGTGCAAGATTGATTTCGGCACGCACATCAACGgcAGGATCATTGACTGTGCCTTCACTGTCACCTTCAATCCAAAGTATGACCGTTTGCTCGAGGCTGTGAGAGACGCTACCAACACGGGCATCAAGTGTGCAGGTATAGACGTACGCCTTTGCGACGTCGGAGAATCGATACAGGAAGTGATGGAGTCGTACGAGGTTGAAATAGACGGCAAAACGTATCAagTCAAACCTATTCGGAACCTGAACGGACACTCTATCGGTCAGTATCGGATACACGCTGGTAAAACGGTGCCTATAGTGAAGGGAGGAGAAGCCACTAGAATGGAGGAGGGGGAGGTGTACGCTATCGAGACGTTCGGCAGCACCGGTAAAGGAGTTGTGCATGATGACATGGACTGCTCGCATTACATGAAAAACTTTGACGTTGGACACGTGCCAATCAGGCTGCCCAGGGCGAAGCACTTGCTAAACGTGGTGAACGAGAACTTCGGTACCCTTGCGTTTTGTCGCCGCTGGCTTGACCGTTTGGGCGAAAGCAAGTACCTGATGGCCCTGAAGAACCTGTGCGACCTGGGCATCATCGACCCGTACCCCCCGCTCTGCGACGCCAAGGGTTCGCACACGGCTCAGTTCGAACACACCATCCTGCTCAGACCTACGTGCAAGGAAGTCGTGAGTCGCGGGGACGACTACTGAGACGTACCTACGCGTAAAACGCCCACACTCCGGTCTCGCGCAAACACGTACGCATATAGGCGTTCTCAAAAAGATTAAACTAGTTTAAAACCCcgaactgctgctgctgcgaaCGCGCAGCATATACTCAGCGTTAAGTAAGGCATGAAAATACTATGCATGGGTACGAGTCGGTGCCCGAAGTGAGAGCGAGATAAAGCCTTTATGCTCATTTGTACAGTGAATGAGAGAATGTAAAGAGTCTGGCTGCTTGGCTTTACACCTCACCGAAGGGCTTTCGCGAGAAAAACTAATTCATCAGGAGATAAACCCGTAATGCGCACagcttttacagtttttttggtATTTGTATGATATCAAATGGCTGTCTCATCTAGTACCTATTACATTTTGAACTCCccgaattgtttttttttttttttaaaaaaggtctAAATAAATTGTACAATACTTCaaa
>XM_043236713.1
CGGCAGCTTTTCCGGGCTCCTCCCACAATGCATCGGTCCCTCTCCACTCGCGTTCGCGATCATGGAGGCGAACGGGACCGAGCCGCTGCCGGAGCAGCCAGGCGTGGACACGCTGATCCTTAACGGGGACGCGGCGGATCGAGAAGAAGTCGACCCcgccaagaagaagaagaagaagaagaagaaaagcaaGTCCGCCGCTTCCGCAGGACACAGCGAGCAGGGCGAGAACGGCGAGGCTGAGGTGAGGAAACAAACCGAGCAACAGAACCCAGATGAGAAAGATAGAGAAGAGGATGGAGAAGAAGACGCTGAGGAAGCTGACAACGTCTctgggaaaaagaagaaaaagaagacaaagaaaaaaaaaggacCCAAAACCCAGACGGACCCTCCGTCCATCCCCATCTGCGATCTGTACCCCAGCGGTGTGTTTCCTGTGGGTCAGGAGTGTGAATACCCTCCATCACAGGATGGGCGTAGCGCCGCTTGGAGAATGAGCAACGATGAGAAGCAAGTGATGGATAAAGCCAACGAGGAGATGTGGAATGACTTCCGGCAGGCGGCCGAAGCTCATCGACAAGTGCGGCAGTATGTAAGGAGCTGGATCAAACCTGGAATGACTATGATTGACATCTGTGAGCGTCTGGAGGACTGCAGTAGGAAGCTGGTCAAAGAGGACGGTTTGAACGCGGGGCTGGCGTTTCCTACCGGCTGCTCGCTGAATAACTGTGCTGCTCACTACACCCCAAACGCCGGGGACCCTACTGTTCTCCAGTACGACGATGTGTGCAAGATTGATTTCGGCACGCACATCAACGgcAGGATCATTGACTGTGCCTTCACTGTCACCTTCAATCCAAAGTATGACCGTTTGCTCGAGGCTGTGAGAGACGCTACCAACACGGGCATCAAGTGTGCAGGTATAGACGTACGCCTTTGCGACGTCGGAGAATCGATACAGGAAGTGATGGAGTCGTACGAGGTTGAAATAGACGGCAAAACGTATCAagTCAAACCTATTCGGAACCTGAACGGACACTCTATCGGTCAGTATCGGATACACGCTGGTAAAACGGTGCCTATAGTGAAGGGAGGAGAAGCCACTAGAATGGAGGAGGGGGAGGTGTACGCTATCGAGACGTTCGGCAGCACCGGTAAAGGAGTTGTGCATGATGACATGGACTGCTCGCATTACATGAAAAACTTTGACGTTGGACACGTGCCAATCAGGCTGCCCAGGGCGAAGCACTTGCTAAACGTGGTGAACGAGAACTTCGGTACCCTTGCGTTTTGTCGCCGCTGGCTTGACCGTTTGGGCGAAAGCAAGTACCTGATGGCCCTGAAGAACCTGTGCGACCTGGGCATCATCGACCCGTACCCCCCGCTCTGCGACGCCAAGGGTTCGCACACGGCTCAGTTCGAACACACCATCCTGCTCAGACCTACGTGCAAGGAAGTCGTGAGTCGCGGGGACGACTACTGAGACGTACCTACGCGTAAAACGCCCACACTCCGGTCTCGCGCAAACACGTACGCATATAGGCGTTCTCAAAAAGATTAAACTAGTTTAAAACCCcgaactgctgctgctgcgaaCGCGCAGCATATACTCAGCGTTAAGTAAGGCATGAAAATACTATGCATGGGTACGAGTCGGTGCCCGAAGTGAGAGCGAGATAAAGCCTTTATGCTCATTTGTACAGTGAATGAGAGAATGTAAAGAGTCTGGCTGCTTGGCTTTACACCTCACCGAAGGGCTTTCGCGAGAAAAACTAATTCATCAGGAGATAAACCCGTAATGCGCACagcttttacagtttttttggtATTTGTATGATATCAAATGGCTGTCTCATCTAGTACCTATTACATTTTGAACTCCccgaattgtttttttttttttttaaaaaaggtctAAATAAATTGTACAATACTTCaaa

Function

symbol description
metap2a Predicted to enable metal ion binding activity and metalloaminopeptidase activity. Predicted to be involved in protein initiator methionine removal. Predicted to act upstream of or within proteolysis. Predicted to be located in cytoplasm. Is expressed in myotome and somite. Orthologous to human METAP2 (methionyl aminopeptidase 2).

NR:

description
PREDICTED: methionine aminopeptidase 2

GO:

id name namespace
GO:0070084 protein initiator methionine removal biological_process
GO:0006508 proteolysis biological_process
GO:0005737 cytoplasm cellular_component
GO:0070006 metalloaminopeptidase activity molecular_function
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K01265 map; methionyl aminopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236712.1 True 1969 mRNA 0.52 11 13423238 13432687
XM_043236713.1 False 1943 mRNA 0.52 11 13423255 13432687

Neighbor

gene id symbol gene type direction distance location
lamb1b lamb1b,LOC107755155,LOC107689224 coding upstream 78177 13326365 ~ 13345061 (+)
LOC122342559 si:dkey-183c16.7,LOC107689220,LOC107755152 coding upstream 97279 13305744 ~ 13325959 (+)
LOC122342558 LOC107689220,LOC107755152 coding upstream 105168 13313892 ~ 13318070 (+)
LOC122342560 si:dkey-183c16.7,LOC107689220,LOC107755152 coding upstream 112820 13306353 ~ 13310418 (+)
il15ra NA coding upstream 121284 13292988 ~ 13301954 (+)
depdc4 si:ch211-265o23.1,LOC107755163,LOC107689232,LOC107597010 coding downstream 7949 13440636 ~ 13446821 (+)
scyl2 scyl2,si:ch211-244b2.1,LOC107755162 coding downstream 14270 13446957 ~ 13458895 (+)
tnni1d tnni1d,LOC107597014,LOC108280151,LOC103374597 coding downstream 65053 13497740 ~ 13501524 (+)
LOC122342856 LOC107689257,LOC107726829 coding downstream 91263 13523950 ~ 13530743 (+)
iqsec3a iqsec3,iqsec3a,LOC107689235,LOC107748472,LOC107689713,LOC107584743 coding downstream 102437 13535124 ~ 13632058 (+)
G28248 NA non-coding upstream 49272 13247769 ~ 13373966 (+)
G28267 NA non-coding upstream 102122 13312934 ~ 13321116 (+)
G28256 NA non-coding upstream 191255 13231664 ~ 13231983 (+)
G28255 NA non-coding upstream 192684 13230162 ~ 13230554 (+)
G28254 NA non-coding upstream 194637 13228381 ~ 13228601 (+)
G28295 NA non-coding downstream 5249 13437936 ~ 13440022 (+)
G28298 NA non-coding downstream 34717 13467404 ~ 13470135 (+)
G28312 NA non-coding downstream 78169 13510856 ~ 13513593 (+)
LOC122343375 NA non-coding downstream 83943 13516630 ~ 13520457 (+)
G28446 NA non-coding downstream 325280 13757967 ~ 13760112 (+)
G28252 si:dkey-183c16.7,LOC107689220,LOC107755152 other upstream 107554 13305669 ~ 13315684 (+)
kin kin,LOC102791470 other upstream 268880 13150736 ~ 13154358 (+)
gnai1 gnai1,LOC107590838,LOC100706147,LOC103382723,LOC106609493 other upstream 1607933 11796982 ~ 11815305 (+)
ndufb2 ndufb2,LOC107755897,LOC107578274,LOC107694192,LOC107590801,LOC107710676 other upstream 1732109 11689314 ~ 11691129 (+)
acss3 acss3,LOC107694183,LOC107755903,LOC107680029,LOC107749070,LOC107560301,LOC107590709 other upstream 2007011 11386130 ~ 11416227 (+)
LOC122342701 im:7143923,cpne8,LOC101886030,LOC107566841,LOC108279828,LOC107689738,LOC108427072,LOC103365370,LOC107666208,LOC102193326,LOC102297242 other downstream 450207 13882894 ~ 13961098 (+)
trmu trmu other downstream 552830 13985517 ~ 13991772 (+)
tbc1d22a tbc1d22a,LOC107689730,LOC107710738 other downstream 744743 14177430 ~ 14294618 (+)
tafa5a fam19a5a,fam19a5,LOC107552289,LOC107689731,LOC107563619,LOC107721159,LOC106609108,LOC103356475 other downstream 967342 14400029 ~ 14482821 (+)
LOC122343376 LOC107699368,LOC107601007,LOC107733210,LOC105896948,LOC104933464 other downstream 1725068 15157755 ~ 15214432 (+)

Expression


Co-expression Network