ndufa12 (ndufa12,LOC107667714,LOC107755161)


Basic Information

Item Value
gene id ndufa12
gene name ndufa12,LOC107667714,LOC107755161
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13373631 ~ 13375343 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236714.1
TGAGGTGATGTTTGAAGGGGGACGGTAAAGTCGCGCGGCGGTCCGTCCGTGTTTAGAGTCCGTCGGTTATGGCGGAGTACGTGAACCTGGTTCGGCGGGCCGTCGGTCAGCTCACGGGTCACGGCGGCGTTAAAGGCTTACTGCTGCAGCTTTTTAGGGTCTCCGACATAAAGACTGGAACCTTGGTGGGTATTGACAAATACGGCAACAAATACTATGAGGACAAAAGATACTTTTTCGGCCGCCACCGCTGGGTGATTTACTCCATGGAGATGAACGGAAAGAATACACTGTGGGACTTTGATGCCAGCATGGTCCCTGCCGAATGGCACCGTTGGCTGCACAGCATGACGGATGATCCCCCCACCACTCACCCTCCAGAGCCCAAGAAGTTCCTGGCCACAGTTCATCAGTTCAACAACAGTGGCACGGCTAACTGCTACGTACCCTTTTCAACCACTCACAAGAAGATCCACGAGTGGGTGCCACCGAAAGCTGGAGAGAAATAATCCCTCATCTTGTTTGTGTTCCCTTTACCATCTCTGACCAGTTCTGCTGTTTGGAGCATTCTGTAAATTGTAGCTTTATAAtcatcaataaattaaaactgatgTCTGTC

Function

symbol description
ndufa12 Predicted to enable NADH dehydrogenase (ubiquinone) activity. Predicted to be involved in response to oxidative stress. Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 23. Orthologous to human NDUFA12 (NADH:ubiquinone oxidoreductase subunit A12).

NR:

description
PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016020 membrane cellular_component
GO:0008137 NADH dehydrogenase (ubiquinone) activity molecular_function
GO:0009055 electron transfer activity molecular_function

KEGG:

id description
K11352 NDUFA12; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236714.1 True 619 mRNA 0.51 4 13373631 13375343

Neighbor

gene id symbol gene type direction distance location
rbm17 rbm17,LOC107755150,LOC107748463,LOC107663450 coding downstream 72302 13281183 ~ 13301329 (-)
pfkfb3 pfkfb3,LOC107555830,LOC107748462,LOC107663448 coding downstream 98157 13268075 ~ 13275474 (-)
itih2 itih2,LOC107555817,LOC107666937,LOC107748478 coding downstream 209508 13152421 ~ 13164123 (-)
atp5f1c atp5c1,LOC107728502,LOC107748457,LOC107555824 coding downstream 222925 13146654 ~ 13150706 (-)
taf3 taf3,LOC107555823,LOC107675973,LOC107578374 coding downstream 228723 13102315 ~ 13144908 (-)
nr2c1 nr2c1,LOC107689225,LOC107755159 coding upstream 831 13376174 ~ 13384446 (-)
fgd6 fgd6,LOC107755156,LOC107689226,LOC107667720,LOC107748482,LOC107567667,LOC107597032 coding upstream 9245 13384588 ~ 13403216 (-)
usp44 usp44,LOC107755158,LOC107597009,LOC107667716,LOC107748469,LOC107567668,LOC107689228 coding upstream 57966 13433309 ~ 13440103 (-)
si:ch211-244b2.3 NA coding upstream 85700 13461043 ~ 13465673 (-)
si:ch211-244b2.4 NA coding upstream 90685 13466028 ~ 13470349 (-)
LOC122342564 NA non-coding downstream 29374 13343726 ~ 13344257 (-)
G28377 NA non-coding downstream 53883 13311873 ~ 13319748 (-)
G28359 NA non-coding downstream 121597 13250651 ~ 13252034 (-)
G28353 NA non-coding downstream 128243 13242506 ~ 13245388 (-)
G28350 NA non-coding downstream 144312 13229094 ~ 13229319 (-)
G28434 iqsec3,LOC107689235,LOC106609634,LOC107689713 non-coding upstream 234873 13610216 ~ 13612771 (-)
G28545 LOC107689243,LOC107689721,LOC107726844,LOC107569223,LOC107566846 non-coding upstream 445353 13820696 ~ 13827052 (-)
G28564 NA non-coding upstream 491434 13866777 ~ 13867298 (-)
G28544 NA non-coding upstream 494079 13869422 ~ 13870614 (-)
G28568 NA non-coding upstream 504688 13880031 ~ 13880847 (-)
tmcc3 tmcc3,LOC107689246,LOC107667715 other downstream 11693 13316932 ~ 13361938 (-)
tmem110l tmem110l,LOC107597025,LOC107748459,LOC107675974,LOC107555827,LOC107666935 other downstream 186741 13176961 ~ 13186890 (-)
cpm cpm,LOC107728505,LOC107710685,LOC107666948,LOC107669712 other downstream 884450 12465612 ~ 12489181 (-)
G28093 slc35e3,LOC107710682,LOC107556774,LOC107737854 other downstream 1357864 12014631 ~ 12015767 (-)
magi2a magi2a,LOC107680009,LOC107755877,LOC107591172,LOC107694149,LOC107590979 other downstream 1376992 11841965 ~ 11996639 (-)
G28397 vezt,metap2,metap2a,LOC107755144,LOC107689227,LOC107597031,LOC107667718,LOC107755160,LOC107689230,LOC107597011 other upstream 36281 13411624 ~ 13432703 (-)
LOC122343399 LOC107726825,LOC107689735,LOC107584742 other upstream 317128 13692471 ~ 13698715 (-)
LOC122343280 NA other upstream 440231 13815574 ~ 13831851 (-)
G28575 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 other upstream 600014 13975357 ~ 13980559 (-)
cerk cerk,LOC107710741,LOC107689729,LOC107552286,LOC107600034,LOC107721152 other upstream 780149 14155492 ~ 14176742 (-)

Expression


Co-expression Network