lrguk (lrguk,LOC107690848,LOC107744931,LOC107725511,LOC107676907,LOC107555539)


Basic Information

Item Value
gene id lrguk
gene name lrguk,LOC107690848,LOC107744931,LOC107725511,LOC107676907,LOC107555539
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 8019911 ~ 8034929 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236719.1
ATGCGAGCGCAAGCCTTACAGAAAATCCTCTTTTGCTAGCGTCTAGTTAGTAGACGAGGGGTGGACGTCGTTTTTGTAAGTAATAGCGTCAAATGATCAATCTTTGGCGTTTGTGTTAAGCTGGACATGTCAGATTACTTCCTTTCCTCGTTAATAAGCGCTTCTCTCTGGAGACTGGAGACCATAGAGACAGCAGAAGAAGAGAGATGACAACAATGACGAATGACGGTGAGTTAATGGAGGACGAGGTGTTTAAATGCCTGTCCGTCCTGGGACAGTCAGCTACCGGACTCCAGCACACTTACCTATGCCTCTCTATCCCAGGGCGAGACTTGAAAAATGTCTCCATTTTATGCAATTACATCTATCTACAAAAGCTAGAGCTTCCCTACAATAAAATCAAAGATCTATCCTGCGTGAGTCACATGCCACACCTCATCATACTGGATGCTTCCCACAACCAACTCACTGAGTTTTTTGGATTCCAGCCGCCAAAAAATCTCAAGGAGGTAAATTTCTCACATAACCAGATGTCCGCAATGAAGGATCTTTCTGCATATTCGTCTTTAACAAAACTTATTCTTGACTATAATTCATTTAGTGCCATCAGGGGGCTGGAAAAGTGCAAAAGGCTCTCACACCTCAGCCTGACCCATAACAACATCTCCCGCATTAGGGGTCTGGACCATCTGCCACTCAGAAAGCTCTGCCTGagtgGGAATGTGATACAGAAGATTGAGAATCTCCAGACTCTAAGCAGCCTCCAGGTTCTGGATTTGTCCTGTAACCGGATTCAAAGCCTCTCGGGTCTCCAGAACCTCCATCTCCTGGGAAACATCAACCTTGAGAGCAATCTGATCAATGAGGTAAAGGAGGCTGCACATATGCATGACCTGATACTGTTGAGAGAAATTAATCTCCTCAGAAACCCAGTGCAGgaccAGGACGACTATAGACTAGCTGTGATATTCCTCCTTCAGCACCTCATAATTCTAGATCAACACACTGTAACTGCAGAGGAGAAGGTGTCTGCTGTGAACAAGTATGACCCTCCTCTGGAGGTGGTCGCAGCCAGAGATCATATGACCCACTTGGTATATCAGCTCATGCAACCTCAGGTTATTTTTGACAGTACTCTCCCCAGTCTGGATGCTCCATATCCCATGCTGGTCCTCACTGGCCCCCAAGCCTGTGGCAAGAGGGAATTATCCCATAAGCTGTGCCAGGAGTTTAGCGACTTTTTTGCTTATGGTGCCTGCCACACCACGAGGGGGCCCTATTATGGGGAAGAGGATGGATCCGACTATCACTTTGTCACTGAAGAAGAATTTCAGAACATGATTCAAATGGGTCAATTCGTCCAGACAATGCAGTACGGAGGACATTGGTATGGCCTATCGCGAGAAACTATTGAACATGTGGCTCGTGAAGGTCTGGCCTGCTGTGTGCATATGGAACTAGAGGGAGTGTATAGTTTGAAGAACTCATATTTTGAGCCACGTTACATCTTGCTGATCCCCACTGTTGTTGATAATTACATTTGCTTTCTGAAAGCAAGAGGATTCTACAGCAACGCTCAGATGGAAAAAGCCGTGTCTCGTATTGATTTGTATTCCATGACCAACAGAGAATCGCCTGGCTTCTTTGACAACATCATACCTTGTGATGATCGTGCTGAGGCCTACCAGACTTTAAAACAGCTGGTAAAGGAGTACCTGGGTCTAGAGGAGCATGGAGGAGGTGACAGCAGCTCAGTGACATCTGACAACACCTCCACAAACGCAACTGGCGAGTTACTGGCAGCCAACACGACAGAGGCCACTGACCTCATGGACTCCTACAGCAGAAACTACCAGAACAAAATCCAGGCCCAAATGACCCCGCAGCAGACTCCTACAGAAATGGCTTCCAATCACAGACGCCAGCAGCTGATTCGAGAAGCTCTGAGTGGGAAGAGTCCTGGTGCTTATGCTGAGCTGTTTCAGAGaagTGCACCCACTGCTCCATCATCATTAGCCTCTCAGTCCCGGCCCCCACCCGGCCCCTCTTCCTCAGTGTGTCCCGTTGGCCTCAACGCTACTGACCCTGATCAGGACAGCAGTTCTGAGGAATCTCGTGCCAGTTCTGGCCTGTCCATGAGGAGCTCAGCAGGGGTGCTCTCAGTGGCCCAGGGGTCAGACACTGGCTCAGGGCCCAACATAGAGCCTTTGGATATTTCTATGTTGGGGCAGGACCAGGACTCTCTTAGAGGTCACATGGAGTCTGGCCTGACCCCTGATGCCCCTCGCTCTGTGTCTGAGAGGGTCTCCCCAACGCTCCCTTCCTCCCCGGGCCGCCCAGGTGCCAACGTTAAACCAGTCCTTCCGCCCATCCCATCTGGAAGGAAGACCAATGAGTCTGGCTCAAAGCAGTAACTAACAGGACAGAGAGCTAGAGAGGGTATAGATAGTGAGATATTAGCACATCACGTGAGTGTTAGTGGCAAAAATAggtttttgaaataagtttaattAACCTCTGTAGCTTCAAGCAAGCCATTCAATAAATGACAATGAAGGCAGCAGATGTGCTCTGTGCTGTGAGGCAAAAGCAGGTCAGGTCATTGGAAAATATGGAGATTCCCATCCCTCAACTGTGTCCTCCAGTGTGAGTGATCTGAGAGGTTGAAGGCTTATCCGTCATCAGCAAATCTAAGCTCTGAAAACGGCCCGAAGCTCTTAAATCCCTGGACACTGGAAGCGAGGCAAGAAGGTGTGCTATGGAGGTCACgctttatattaaatatcatgTCACAGAATAATCACTTTGAAATAATGTTCAGGTTTTTTTGCATCACAGTGTAAACAAGCCACAACAACAAAATTAGCCCAAAGCAACAGAAGCAAGCCGCAATAACAAAATTAGCACAACACAAAGGAAACAAGTTGCAACGCAACGAAATTAGCACAGCACattgaataaaaatcaaaattagTGCAACAAGGCAGAATTAGCACAAAACATCTAAATTAGTCCAGAGCATTGTTTATTGGCGATTTGTTGTGTTGTGGAGATTTTGTCGTGTTGTGCACTACTGGGCCAGTGTAACTAATAGAATATATTGACATAACTAAACAGAAATatgttaacataatatatatgtaacatgAACTTGTAATCTATGTGTAACTCAATGATCTTCTGCGGCTCATTCCTGACCACAAATGAGCAGCTGGAACAGTTGGAGAGACTCTCCTCctgtaattaatgtattttctgGCTTAATCTGACACACAGACTGAGTAAATATATTGAGACAGCTATTCGGGTATCTCATGATACAAGTTGCATTTCATTTCCGCTTTCATTTGTCATCAGCGTGCGGTGAgcctgtgtgtgtacctgtacagtaagtacacacacacacctggccgtCCGTCAGCGTCAGTCCCTCTAACCGGCAGATGTTGCAATGATCTCATAATTCAGAGGCAGTTTCAGACAAGACGGTTGTGCAAACCCTCGGGCATAACCTACTTACAGAGACAGTCTTCACACTTTTACTATCTTATCACGCTCATCTAGATCTTACGCTCCTAATGCTGCACTATATGCGAATATATGAAATTATTCCTACATGAATGAAGCAATGACTTGGTCAATTGAACATGACAAATAGATATCGTAGCCATGGCTTACGAATTCATTCCTTGAGAATTTAGCCGTTTTGGtctgtgatttattcatttgttccttcattttaatatcaaatcGTGGTCACATTATACTGATTCATTCACTGCGCGTCATGTATTGTATAACATTATAGTCatacataatcataaaaataaatttgcttaCGATCTAATGGTTTAAATATTCAACTTTGTGACTTTGTtagacttttaattttaatgctaatggtagattttttttatagcaagaaagacttaaaataacttaagattagacagtttgttattaattgtttatatatatatatatctgcacATTATATGTTCTCCCAATTTTCCAACTTCAACTTGTACattcttaaatataaagacaTCTGAGgttcatataatttaatgacattgaccaaaaagaaaattggaacctttattttcaaGAATGTGGTGTTAACCTATCAGTCAGTGCAGACACACTTTCATAAAATGATGGAGATTTTCATGACAGGCTGACTCATAATTTCCTTCTCTTCTTTCATCTCCGGACGTATCTCCATAACCTGGCCTCTGAAAACCAAGATCATATCTCAGAGAAGGACAAACCTGTCCACATTATATTATCCAGGGCAGcgctgggagacaaagaaaccGGCATAAATCATCTTTTGCACACAGAGACAAGCGAGAGAGGCTAAATCATAGTAGAGCTGTTGTATTTTACCCTCATAGCTGCAAAAGCTGTTTGTCAGCTCAGGCCTACAGGGCCACAGCTGTGACTGCTCTTGATACACTGCATTGTTAAAATGGTACTTCAGTGAAGTTCAGGCATGTGGTTTCTCAGTCACAGAATAGAGGTTGTGGATTAGAAATAGGAGCTATTCCTAAATCTTCATCTGCACTACATACTTATTATATTCTGTTAATAGAAGTGCGTTTAAGCAATatcatactgtatgtgtaaagTGTTGTTGTACCGAACATCAGCAAATGTGCTGTTATATAACAGTTCAATAAGCAATCCTGTAATATGAGTGTGAAGTTCAAATTTTAATGTTAGGGTTTTGCAAAAATATGTGAGAACTTGCGATGATTAATGCTGTTTCCACGTGGCTTCGACTGCATGTAAATAAGGCGAGCAACTAAAAGACCAATATCTAACTTTAAACTgagtttaattttatatcaaGGCATGCATTTCACAGACTTTCGTAAATATACCATgcttgcttattaatatttcgTCTGATGTGACGAAATATTTCAGTAGCCAATTAGTTTTGGTaggtgtctttgttacagtGTGTACTTACTCCAAGGTCAGGTTTAGGCTTGATTTAAGCTTGGTTTTATATAACTGTgcatattttactgttaaaactAGTCCATGTAACTAGCACACTGTGGAGCTAAGTGTTCATTTCTAGTACTTTTAGGTCTGATTAGTTTGCACATTCAAATCTGCAGATATTCTTCCAAAACCGGCATAGAAGATGCGGAAAATAGATAATTAATTTGGTTCTTTTACAGTAGGATGGACTCTCGTACAGACACAAGTCTGCTTAAAATTGAATCAGATTTTGAAGCACGTCCCTGACAGACGCCTTTGAACTGGACATACAGTATAAGAGGCTTTGGAAAACTTCTGGtcttaataaaacattcagacAGGGAAATGATTATTATGTGCTGTTGATTGATGCGTGTCCTCAAGCGTTCACCGAAAGCACAGAATGTAATTCGTGTCTTCACATACCGATGTCCTCCGTAAATGATTTCTTATTTATAGTGCAAGAACCTATTTGTAAGGCGAAGGTGAATCTCGTAGTTGCTTCTAATGTAAGCTTGTGTAAGTTGGTTTTGCTGTTGTGTTGAGTCaacatttaatctttaaaggTGTAGTTAGCTTCACCCCTGAGAATTCACTAGCGCTTCTGCTTGCAAGCCATGCGGCTCAGTTGTTGTTACCAAGGCAACTGGCTCTCTGCAATGCACCTCCTGTTTGCCTGTTTGGAGACAGGAAGCCTGAAGCATTGACTTCATGTGCCAACAGCCCCACATTAATTCCCCCTCATGCTGATGGAGGAAGATTTCTGATACTTTTAATTAGGCGATACTCACTCTCCCACACAGTTTCTTGTTCTTTTCTCCCTTTTGCATTGTCAGACAAATTATAAAAGTTTTGAGACTTGTTAAAATGCTTGTTTAAAGGAAGCAGCATAACTGAAGTCAGCATGACTTAATTGTCACGTACCGTCAGGTTCCAGTGTACAGTTACTGACAGTGCTTGAACTTTATCAGTGGCTCTAAGTACAatacacttacatttttttttaaaatataattaattcagtgtttttttttattgattccattttatatgatatatgttTAATAAGCTATTATGTAAGCGTTATGTTACAAGTATACTGTAAATTTATGcagtgttatatatttatgtttatcgtagtaacacatttttttaaacatattaacaaataattaccATAATTACCAAAAGTGTAGCCTTGCCTTGCTACTTGCTTAAACTGGTTACATgcaactttatttttgtctgttatgttctgttgtattaaaaatttttaCTATTACCATATTACCCTTTCTggctgtattttattattttataaaatcatttttttattatttttagttttgttcattttgtattAGATgatttgtgtttaatgtgtaTTAAACCATTTTACCCTTTCTggatattgtatttatt

Function

symbol description
lrguk Predicted to enable guanylate kinase activity. Predicted to be active in cytosol. Orthologous to human LRGUK (leucine rich repeats and guanylate kinase domain containing).

NR:

description
PREDICTED: leucine-rich repeat and guanylate kinase domain-containing protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236719.1 True 6417 mRNA 0.41 20 8019911 8034929

Neighbor

gene id symbol gene type direction distance location
exoc4 exoc4,LOC107555552,LOC107585070,LOC107676929,LOC107690838 coding upstream 409 7917750 ~ 8019502 (+)
zc3hc1 zc3hc1,LOC107676937,LOC107587167,LOC107690584,LOC107584496 coding upstream 487344 7528337 ~ 7532567 (+)
cax1 LOC107725610,LOC107587166,LOC107676922,LOC107690555,LOC107584270,LOC107729854 coding upstream 500186 7511541 ~ 7519725 (+)
smo smo,LOC107725609,LOC107690544,LOC107729864,LOC107676906 coding upstream 509073 7503572 ~ 7510838 (+)
tspan33a tspan33a,LOC107725621,LOC107587188,LOC107729833,LOC107690898,LOC107595743 coding upstream 518880 7494956 ~ 7501031 (+)
ucn3l ucn3l,LOC107725544,LOC107676913,LOC107595855,LOC107555541,LOC107744883,LOC107690866 coding downstream 66322 8101251 ~ 8102804 (+)
copg2 copg2,LOC107725548,LOC107676915,LOC107744880 coding downstream 68416 8103345 ~ 8112909 (+)
si:dkeyp-38g8.5 si:dkeyp-38g8.5,LOC107595941,LOC107659854,LOC107744947,LOC107690729,LOC107725679 coding downstream 217155 8252084 ~ 8254845 (+)
pkp2 LOC107725677,LOC107659846,LOC107586091,LOC107694692,LOC107589947 coding downstream 425519 8460448 ~ 8474705 (+)
tcp11l2 tcp11l2,LOC107586172,LOC107589958,LOC107694691,LOC107659845,LOC107744901,LOC107725683 coding downstream 440777 8475706 ~ 8482653 (+)
LOC122342925 NA non-coding upstream 383231 7590561 ~ 7636680 (+)
G26669 pus7l,LOC107591455 non-coding upstream 931552 7083300 ~ 7088359 (+)
LOC122343425 NA non-coding upstream 958869 7057424 ~ 7061042 (+)
LOC122342579 NA non-coding upstream 1006250 6985243 ~ 7013661 (+)
G26585 grip1,LOC107587171,LOC107655593 non-coding upstream 1615512 6399167 ~ 6404399 (+)
LOC122342735 NA non-coding downstream 80959 8115888 ~ 8123874 (+)
G26994 NA non-coding downstream 90330 8125259 ~ 8125994 (+)
LOC122342736 NA non-coding downstream 94232 8129161 ~ 8132328 (+)
G27066 NA non-coding downstream 140536 8175465 ~ 8175799 (+)
G27073 NA non-coding downstream 190529 8225458 ~ 8298999 (+)
ube2h ube2h,LOC107676921,LOC107690610,LOC105888480 other upstream 461422 7532912 ~ 7558489 (+)
akr1b1.1 akr1b1,LOC107725653,LOC107676909,LOC107587163,LOC107591878 other upstream 556538 7413936 ~ 7463373 (+)
G26692 NA other upstream 792474 7187940 ~ 7227437 (+)
vhll NA other upstream 1628984 6388543 ~ 6390927 (+)
LOC122342837 grm4,LOC107549321,LOC107716363,LOC107708172,LOC107569297,LOC107666973,LOC107678149 other upstream 2121084 5862607 ~ 5898827 (+)
col7a1l col7a1l,LOC107725642,LOC107744879,LOC107676908,LOC107555540,LOC107592433,LOC108435442 other downstream 6503 8041432 ~ 8100749 (+)
G26993 NA other downstream 102809 8137738 ~ 8138439 (+)
G27079 NA other downstream 212983 8247912 ~ 8249223 (+)
stmp1 NA other downstream 447961 8482890 ~ 8483831 (+)
spx spx,LOC107589995,LOC107744902,LOC107694690,LOC107596170,LOC107725633 other downstream 452982 8487911 ~ 8491938 (+)

Expression


Co-expression Network