LOC122342759 (fbxl14b,fbxl14,LOC107580311,LOC107656333,LOC108279751)


Basic Information

Item Value
gene id LOC122342759
gene name fbxl14b,fbxl14,LOC107580311,LOC107656333,LOC108279751
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 3354369 ~ 3356141 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236825.1
GTTTAAATATGCGCGCCTCCCCCGCAGCCGCTCTGTGCTGGCGGCCCTGCCAAGTCAGTTTGAAAAGATCAGACAAAGGCAGCAGGAAGCCCCTCGGCTTGGCAATGAGTGCGAGCGGAGCACAAACGCGAAACGAAACCTCACTCTTTTATCTGATAGCGGACTGAATTTATTTTCTCCCGAGGTTTGTGGCAGTTTTAGAcatcttttgaaaatgtacgaCCGTCTGGATCCCCGGGTCGAGCGAAGACTATTATCAAAGCGCCAAACGGGCAGCAGCGCTGCCTGACCGCCGATCGCTGTCGGTCTGAATCGGATCAAGCGTCTTTTGGGggcattttttttgcttttgaatccTTCCTACGCCGCTGAAAGGATCACTCGGGACGGGGAGTTGACGATTCACACAGTTAAATGCAAACGGAAAAGCTTGAGGAGCTTtctaaaagcctttttttctcCTGAGGGGACTACGAGCCGCGACGGTGACCGTTGGTGGGGGTTTACCGCCGTTTGTTTTCTTGAGCGCGTTTGGAAGATGGAGACGCACATCTCGTGTCTCTTCCCGGAGATTTTAGCCATGATTTTCAGCTACTTGGACGTGAGGGACCAAGGCAGAGTGGCCCAGGTCTGCACGGCGTGGAGGGACGCATCCTACCACAAGTCCGTGTGGAGGGGGGTGGAAGCCAAGCTGCATTTGAGGCGAGCGAATCCGTCCCTGTTCCCCAGCCTCCAGGCGCGGGGCATCCGGCGCGTTCAGATCCTCAGCCTGCGGCGCAGCCTCAGCTACGTGATCCAGGGGATGCCCAACATCGAGAGCTTGAATCTGAGCGGCTGCTATAACTTAACGGATAACGGCCTGGGGCACGCGTTCGTGCAGGAGATCCCTTCCCTGAGGGTGCTCAATCTGAGCCTTTGCAAGCAGATCACGGACTCCAGTTTGGGCAGAATAGCGCAGTATCTGAAAAACTTGGAGGTGCTGGAGCTGGGCGGCTGCAGTAACATCACGAACACGGGCTTGTTGCTCATCGCGTGGGGTTTGCACAGACTCAAAAGTCTCAACCTGAGGAGCTGCCGGCATGTGTCGGACGTGGGCATAGGGCACTTGGCTGGCATGACCCGGAGCGCGGCGGAGGGCTGCCTCAGCCTGGAATACCTGACCTTGCAGGATTGCCAGAAGTTGACGGACTTGTCTCTCAAGCACATCTCGAAAGGCCTGACCAAGCTCAAAGTGCTCAACCTGAGTTTCTGCGGGGGCATCTCGGACGCCGGCATGATCCACCTCTCTCACATGGCGAGCCTGTGGAGCCTTAATCTGCGTTCGTGCGACAACATCAGCGACACGGGCATCATGCACCTCGCCATGGGCACGTTGAGACTCTCCGGACTCGACGTGTCGTTTTGCGACAAGATAGGCGACCAGAGCCTGGCTTACATCGCGCAGGGCCTGTACCAGCTCAAGTCGCTGTCGCTGTGCTCGTGCCACATCAGCGACGACGGCATCAACAGGATGGTGCGCCAAATGCACGAGTTGAAGACGCTTAACATCGGCCAGTGCGTGCGGATTACAGACAAAGGACTGGAGCTGATCGCGGACCACTTGACGCAACTGACCGGCATCGATCTGTATGGATGTACGAAAATCACTAAGAGGGGACTGGAGAGGATCACGCAGCTCCCCTGCCTTAAAGTTTTGAACCTGGGCCTTTGGCAGATGACTGAAAGTGAGAAAGTGAGGTGAAACTTGGGGGGTTTTggagggagggagaggag

Function

symbol description
fbxl14b Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within protein ubiquitination. Part of SCF ubiquitin ligase complex. Is expressed in hindbrain and midbrain. Orthologous to human FBXL14 (F-box and leucine rich repeat protein 14).
fbxl14 Enables ubiquitin-protein transferase activity. Involved in ubiquitin-dependent protein catabolic process. Located in cytoplasm.

NR:

description
F-box and leucine-rich repeat protein 14b

GO:

id name namespace
GO:0016567 protein ubiquitination biological_process
GO:0019005 SCF ubiquitin ligase complex cellular_component
GO:0004842 ubiquitin-protein transferase activity molecular_function

KEGG:

id description
K10280 FBXL14; F-box and leucine-rich repeat protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236825.1 True 1773 mRNA 0.56 1 3354369 3356141

Neighbor

gene id symbol gene type direction distance location
wnk1b wnk1,LOC107725976,LOC107658853 coding downstream 259964 3027071 ~ 3094405 (-)
LOC122343240 NA coding downstream 329544 3024248 ~ 3024825 (-)
LOC122343283 NA coding downstream 336158 3017632 ~ 3018211 (-)
si:ch211-240l19.8 LOC107658767,LOC107725963 coding downstream 341010 3012766 ~ 3013359 (-)
nudt5 nudt5,LOC107658859,LOC107656337,LOC107726016,LOC107743836 coding downstream 416352 2935107 ~ 2938017 (-)
LOC122342755 LOC107676321,LOC107716109,LOC107709941,LOC107655767 coding upstream 44239 3400380 ~ 3402341 (-)
LOC122342398 LOC107584038,LOC107725905,LOC107658738 coding upstream 162548 3518689 ~ 3520928 (-)
LOC122342400 NA coding upstream 165553 3521694 ~ 3526313 (-)
LOC122342399 LOC107584032,LOC107579834,LOC107656234,LOC107711464,LOC107725908 coding upstream 171894 3528035 ~ 3531141 (-)
LOC122342818 NA coding upstream 175073 3531214 ~ 3532749 (-)
LOC122342458 NA non-coding downstream 234819 3117479 ~ 3119550 (-)
LOC122342459 NA non-coding downstream 237072 3116404 ~ 3117297 (-)
G25625 NA non-coding downstream 357911 2980159 ~ 2996458 (-)
LOC122343423 NA non-coding downstream 816363 2534205 ~ 2538006 (-)
LOC122343417 NA non-coding downstream 1065250 2203585 ~ 2289119 (-)
G25673 wnt5b,LOC107656325,LOC103026771,LOC107580320,LOC107744029,LOC107726030 non-coding upstream 24517 3380658 ~ 3676399 (-)
LOC122342758 NA non-coding upstream 46683 3402824 ~ 3403502 (-)
LOC122342757 NA non-coding upstream 60446 3416587 ~ 3417917 (-)
LOC122342503 NA non-coding upstream 86281 3442422 ~ 3444891 (-)
G25706 NA non-coding upstream 290922 3647063 ~ 3701306 (-)
LOC122342805 NA other downstream 332857 3019092 ~ 3021512 (-)
ccdc3a ccdc3,ccdc3a,LOC107725961,LOC107658768,LOC107580337,LOC107744050 other downstream 342155 2999882 ~ 3012214 (-)
LOC122342907 NA other downstream 881301 2472284 ~ 2473068 (-)
dock4b dock4b,LOC107656358,LOC108425388 other downstream 978653 2299635 ~ 2375716 (-)
tnni4a zgc:101560,LOC107725970,LOC107584059,LOC107658770,LOC107656258,LOC107581287 other downstream 1256568 2091351 ~ 2097801 (-)
LOC122342819 foxp2,foxp4,LOC107725896,LOC107728618,LOC107656011,LOC107675840 other upstream 178521 3534662 ~ 3577123 (-)
LOC122342822 tmem9b,LOC107674442,LOC107750540,LOC107754675,LOC107585953,LOC107700603,LOC107593285 other upstream 244859 3601000 ~ 3601991 (-)
LOC122342823 scube2,LOC107750541,LOC107585952,LOC107674429,LOC107593229,LOC107700597 other upstream 246215 3602356 ~ 3618367 (-)
shank3b shank3b,LOC107725995,LOC107592218,LOC107656300,LOC107580703,LOC107743477 other upstream 777836 4133977 ~ 4161828 (-)
G25880 LOC107658814,LOC107726023,LOC107592209 other upstream 908785 4264926 ~ 4267495 (-)

Expression


Co-expression Network