si:dkey-14d8.1 (si:dkey-14d8.1,LOC107658880,LOC107725921,LOC107579331,LOC107583961,LOC107656391)


Basic Information

Item Value
gene id si:dkey-14d8.1
gene name si:dkey-14d8.1,LOC107658880,LOC107725921,LOC107579331,LOC107583961,LOC107656391
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1604789 ~ 1609142 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236885.1
CCCAGTTGAGCGTTGTTGTTCGTTGCTTCGGTCAACTTCACGATAGTCGTTCGCCAGTGCGTTTAACTGCTATTATGGTTCAATTCTGTGTCACAAAGCGTGCAGAGTTTGATTAAGAGACAAAAATCGATTTATTCTAACCTTAATATATGGAAACCCTTAACGTAGAGAGCCGCGAGGCGGctctccctctctctgcacTGCGTCTGGTTGTGCCACCTCTTCGGCTGATGTCAGCATTTCTATGGCAGGTGGTTCAGCGTCGTATTGTGACACAGTATGGGAAGCTGGAGCAATTTGTGGTGCTGGTAACGGAGACTGTGCCAGACATCATGAGTCGAAGTCTGGTTAATAAACTGATCTTTCACCTGCGGAAAAAGgtgATATTGGAGCTTTGTCTAAAAGATAAAATGCCAGATCTATGGATCATTCAAGCACATCTGGATTCTCTTCGAAATCTCACACTTAAATGTAAGGATGTGGAAAGTGAGATCATTAATAACAAATTTATCAGAATGGTGCACAACCTTTTAGAAGAcccagaaaagaaagagaatttCATACAGCATGTCTTTCCTGTAGAATACGGATCTGGATATGATGCAGTATTACAGAGCCTTGCATGGGAGTTCCTGTCTCGAGTAGAAGATCTGCTGCCGGTGCCCAACCTCAAAGAAACAGCATCACGGCTTTGCGGTGGTCTCTCGATGATGGAGGAGATTGTGCAGCCTCTCTCAGATCCAGTTGAGATTAAGGATGTTCTCCAGCATTTCAAAACGAAAAGACATCATGCAAGAAGCAATGAGCAATCTCAAAGAGTTATCAGCGAAGTGTCCATTCCTTCTACAGCTGAAGTAGTTTGTTTGCCTCATCCAATTGCACAAGAAACCGTCTCGCCTACCATTACCGTTGAAAATGAGGAAACTTTGCCCCCCACCTCCATTGCACAAGAGACAATTATCATAGAATCAGAAAGCAcagagaaccaatcagaatctGATCACGCGGCCATCGCCATAATGAGCCCTTCTCAGAGTTACACAGAAGAGGATGAGCCTTTAGTGGATAGCGAGGAGTTCACGGTAAGAGCTGCCACTGAAGAAGCAGAGGAGGGCTTACAAGAAGAAGAAGTACTTTGTGAGGAGAAAGACCAAGGTGTCTGTGAAGTCCAGCAGATCTACCTGACGGCGGACGGCTCCACTGTGGTGGTTTCAGAGTTTGAGAACGAGGGAGAGGAGGCGACTCAATTGCAGTTTCTAGAGCAATCAGAGATGGTTGAAGCGTCTGGTGTGAGGCAAGTCAGTTTAGAGCAATGGATCTCAGAATTAACTGGAAAAGGCATCTCTTTACCAGTTTTGCCTCCAACTCCTGTTGAGATTGTGAGGGAGGAGACCATCTATGTTCCTGTCATAGAAAGACCACCGTCCGTGAAGTCTATCATACACAGAAAGAGCAGTCCACCTCGAGCTGCAATTTCCAAGAAGGCAGCGGCCACTCCTTCTGAGTCCCAGACAATGCAGGACGAGAAAAGACACAGCTGTCCCGAGTGTCACAAAGAGTTTCGGTTCGAATGTCTGCTGAGGAATCACATGCGCACTCACACGGGTGAGCGGCCATTCCAGTGTTCAGACTGTGGCAAAAGCTTCAGGTGCCTCAGCTTCTTGACGAATCACATCAAAACGCACTCGCTTGCCAGACCTTTCAAATGCATACAGTGTGTCAAGACGTTTCGCAAAAAAGCCGACCTCATCAAGCACATTCGTGTGCACACAGGTGAAAAACCATACAAGTGCACCATCTGTGGCAAAAGCTTCTCTCAAGGCTCATACTTGAAGATTCACCGCGAATGCCACACCTCAGAGAACCTGCACCAGTGTCCTCACTGTGACAAGAGTTTCCCGACAGCATTTAAGCTGTCCATTCATGTCCGCTACCATTCCATGGATCGCTCATATCAGTGTAACCAATGTGGGAAGAGCTTCATCTATGCCAGCCTCCTTCGAAGACACAAAGGTTATCATGCAGGTGAGCGCCAGTATCTGTGCTCCATCTGCGGTAAGTCCTTCGTCTACATGTTCGACTTGAAAAAGCACCAGCGCAACCACGAGAGACCGCGGATCAAGATCCCATGCACGCTTTGTAACAAGACGTTTGCGGGACCCGAGATGCTGAGGTGCCATCTGCGCATACACACCGGAGAGCGTCCATTCCGCTGCAAAATCTGTGGAAAAGCATTCTCTCAGATTGGGAACATGAAGAGACACGAGCGCGTACACACAGGCGAGAGGCCATTCACCTGTGAAAGATGCGGGAAGACGTACAAGCACTCTTCTCATTTGAAGAACCACATGCTCAGCCACACGGGCGAGCGGCCGTGGCAGTGCTCTCATTGTGGGAAGAGCTTCAAATTTGCTGGGCCTCTTAAGAAACATGAGAGAACTCACTTGGGTGAACGAGGAAATCGTAGAAGGAATTACGACCAAACACGTAGCCGCATGAAAACAGAACACAAAAGTCCTTAATTAAATGTAGGGATATTGCAGCTTAACAATGATCAGATGACACATGATTATCTAGTTATTACTTTAAAAGGTAATATAATTGTGTTTCCCAAACAATGCTTTATGCAGTTCATTATTGAAACTGCACACAGAAATACTTTATAAATTTACActtttgtagtatttaaaaggaatagttgactAGAAATAGAAGGTTTGCTGACAGtttaccctcaggccatccatgGTGTAGAACTccaagtttaaaaaatgtatttaaattgaatttattctttaaaagattaaaatgtaacacaCATCTTTTTGCAACACAAGGCATTacttgatggactggagtggcatggtatggattacttgtggattattgttatgcttttatcagctgtttggacttctATTTTGACAGCTcctattcactgcagaggacccatTGCAGactgatgtaatgctacatttcttcaaactatttccaataaaaaaaaacactatat
>XM_043236887.1
CCCAGTTGAGCGTTGTTGTTCGTTGCTTCGGTCAACTTCACGATAGTCGTTCGCCAGTGCGTTTAACTGCTATTATGGTTCAATTCTGTGTCACAAAGCGTGCAGAGTTTGATTAAGAGACAAAAATCGATTTATTCTAACCTTAATATATGGAAACCCTTAACGTAGAGAGCCGCGAGGCGGctctccctctctctgcacTGCGTCTGGTTGTGCCACCTCTTCGGCTGATGTCAGCATTTCTATGGCAGGTGGTTCAGCGTCGTATTGTGACACAGTATGGGAAGCTGGAGCAATTTGTGGTGCTGGTAACGGAGACTGTGCCAGACATCATGAGTCGAAGTCTGGTTAATAAACTGATCTTTCACCTGCGGAAAAAGgtgATATTGGAGCTTTGTCTAAAAGATAAAATGCCAGATCTATGGATCATTCAAGCACATCTGGATTCTCTTCGAAATCTCACACTTAAATGTAAGGATGTGGAAAGTGAGATCATTAATAACAAATTTATCAGAATGGTGCACAACCTTTTAGAAGAcccagaaaagaaagagaatttCATACAGCATGTCTTTCCTGTAGAATACGGATCTGGATATGATGCAGTATTACAGAGCCTTGCATGGGAGTTCCTGTCTCGAGTAGAAGATCTGCTGCCGGTGCCCAACCTCAAAGAAACAGCATCACGGCTTTGCGGTGGTCTCTCGATGATGGAGGAGATTGTGCAGCCTCTCTCAGATCCAGTTGAGATTAAGGATGTTCTCCAGCATTTCAAAACGAAAAGACATCATGCAAGAAGCAATGAGCAATCTCAAAGAGTTATCAGCGAAGCTGAAGTAGTTTGTTTGCCTCATCCAATTGCACAAGAAACCGTCTCGCCTACCATTACCGTTGAAAATGAGGAAACTTTGCCCCCCACCTCCATTGCACAAGAGACAATTATCATAGAATCAGAAAGCAcagagaaccaatcagaatctGATCACGCGGCCATCGCCATAATGAGCCCTTCTCAGAGTTACACAGAAGAGGATGAGCCTTTAGTGGATAGCGAGGAGTTCACGGTAAGAGCTGCCACTGAAGAAGCAGAGGAGGGCTTACAAGAAGAAGAAGTACTTTGTGAGGAGAAAGACCAAGGTGTCTGTGAAGTCCAGCAGATCTACCTGACGGCGGACGGCTCCACTGTGGTGGTTTCAGAGTTTGAGAACGAGGGAGAGGAGGCGACTCAATTGCAGTTTCTAGAGCAATCAGAGATGGTTGAAGCGTCTGGTGTGAGGCAAGTCAGTTTAGAGCAATGGATCTCAGAATTAACTGGAAAAGGCATCTCTTTACCAGTTTTGCCTCCAACTCCTGTTGAGATTGTGAGGGAGGAGACCATCTATGTTCCTGTCATAGAAAGACCACCGTCCGTGAAGTCTATCATACACAGAAAGAGCAGTCCACCTCGAGCTGCAATTTCCAAGAAGGCAGCGGCCACTCCTTCTGAGTCCCAGACAATGCAGGACGAGAAAAGACACAGCTGTCCCGAGTGTCACAAAGAGTTTCGGTTCGAATGTCTGCTGAGGAATCACATGCGCACTCACACGGGTGAGCGGCCATTCCAGTGTTCAGACTGTGGCAAAAGCTTCAGGTGCCTCAGCTTCTTGACGAATCACATCAAAACGCACTCGCTTGCCAGACCTTTCAAATGCATACAGTGTGTCAAGACGTTTCGCAAAAAAGCCGACCTCATCAAGCACATTCGTGTGCACACAGGTGAAAAACCATACAAGTGCACCATCTGTGGCAAAAGCTTCTCTCAAGGCTCATACTTGAAGATTCACCGCGAATGCCACACCTCAGAGAACCTGCACCAGTGTCCTCACTGTGACAAGAGTTTCCCGACAGCATTTAAGCTGTCCATTCATGTCCGCTACCATTCCATGGATCGCTCATATCAGTGTAACCAATGTGGGAAGAGCTTCATCTATGCCAGCCTCCTTCGAAGACACAAAGGTTATCATGCAGGTGAGCGCCAGTATCTGTGCTCCATCTGCGGTAAGTCCTTCGTCTACATGTTCGACTTGAAAAAGCACCAGCGCAACCACGAGAGACCGCGGATCAAGATCCCATGCACGCTTTGTAACAAGACGTTTGCGGGACCCGAGATGCTGAGGTGCCATCTGCGCATACACACCGGAGAGCGTCCATTCCGCTGCAAAATCTGTGGAAAAGCATTCTCTCAGATTGGGAACATGAAGAGACACGAGCGCGTACACACAGGCGAGAGGCCATTCACCTGTGAAAGATGCGGGAAGACGTACAAGCACTCTTCTCATTTGAAGAACCACATGCTCAGCCACACGGGCGAGCGGCCGTGGCAGTGCTCTCATTGTGGGAAGAGCTTCAAATTTGCTGGGCCTCTTAAGAAACATGAGAGAACTCACTTGGGTGAACGAGGAAATCGTAGAAGGAATTACGACCAAACACGTAGCCGCATGAAAACAGAACACAAAAGTCCTTAATTAAATGTAGGGATATTGCAGCTTAACAATGATCAGATGACACATGATTATCTAGTTATTACTTTAAAAGGTAATATAATTGTGTTTCCCAAACAATGCTTTATGCAGTTCATTATTGAAACTGCACACAGAAATACTTTATAAATTTACActtttgtagtatttaaaaggaatagttgactAGAAATAGAAGGTTTGCTGACAGtttaccctcaggccatccatgGTGTAGAACTccaagtttaaaaaatgtatttaaattgaatttattctttaaaagattaaaatgtaacacaCATCTTTTTGCAACACAAGGCATTacttgatggactggagtggcatggtatggattacttgtggattattgttatgcttttatcagctgtttggacttctATTTTGACAGCTcctattcactgcagaggacccatTGCAGactgatgtaatgctacatttcttcaaactatttccaataaaaaaaaacactatat
>XM_043236888.1
GAGCTAAATGCTAAGAGAGTGAAGCTAGCACAACCAATCCTATTAAAGTTacttacacacatacaccacACAACTCAGAACACATTTggctatattatttttttttaaaagagggggctggtaaaaaaaatcctattttgTTCTTTAACTTAACAACTTTCGAACTGTTATGTAGTTTaagaatatttctaaaaaagtgtccattataaataaagacaatgcATTTATAATCTACTGAAATTCAAGTTTTTTTCACATCATTACTTAAAAGCATTGATTAAAACaatattgattaatatttaagagcatttagttaaagttcTCAGCATGTAAAGCTTAATCTACGATATATTATTTGAGCCATATGGATGTTGTATTGCACCTGTTTTACAAAGTAGGCACAACTCAACTctctccctctctctgcacTGCGTCTGGTTGTGCCACCTCTTCGGCTGATGTCAGCATTTCTATGGCAGGTGGTTCAGCGTCGTATTGTGACACAGTATGGGAAGCTGGAGCAATTTGTGGTGCTGGTAACGGAGACTGTGCCAGACATCATGAGTCGAAGTCTGGTTAATAAACTGATCTTTCACCTGCGGAAAAAGgtgATATTGGAGCTTTGTCTAAAAGATAAAATGCCAGATCTATGGATCATTCAAGCACATCTGGATTCTCTTCGAAATCTCACACTTAAATGTAAGGATGTGGAAAGTGAGATCATTAATAACAAATTTATCAGAATGGTGCACAACCTTTTAGAAGAcccagaaaagaaagagaatttCATACAGCATGTCTTTCCTGTAGAATACGGATCTGGATATGATGCAGTATTACAGAGCCTTGCATGGGAGTTCCTGTCTCGAGTAGAAGATCTGCTGCCGGTGCCCAACCTCAAAGAAACAGCATCACGGCTTTGCGGTGGTCTCTCGATGATGGAGGAGATTGTGCAGCCTCTCTCAGATCCAGTTGAGATTAAGGATGTTCTCCAGCATTTCAAAACGAAAAGACATCATGCAAGAAGCAATGAGCAATCTCAAAGAGTTATCAGCGAAGTGTCCATTCCTTCTACAGCTGAAGTAGTTTGTTTGCCTCATCCAATTGCACAAGAAACCGTCTCGCCTACCATTACCGTTGAAAATGAGGAAACTTTGCCCCCCACCTCCATTGCACAAGAGACAATTATCATAGAATCAGAAAGCAcagagaaccaatcagaatctGATCACGCGGCCATCGCCATAATGAGCCCTTCTCAGAGTTACACAGAAGAGGATGAGCCTTTAGTGGATAGCGAGGAGTTCACGGTAAGAGCTGCCACTGAAGAAGCAGAGGAGGGCTTACAAGAAGAAGAAGTACTTTGTGAGGAGAAAGACCAAGGTGTCTGTGAAGTCCAGCAGATCTACCTGACGGCGGACGGCTCCACTGTGGTGGTTTCAGAGTTTGAGAACGAGGGAGAGGAGGCGACTCAATTGCAGTTTCTAGAGCAATCAGAGATGGTTGAAGCGTCTGGTGTGAGGCAAGTCAGTTTAGAGCAATGGATCTCAGAATTAACTGGAAAAGGCATCTCTTTACCAGTTTTGCCTCCAACTCCTGTTGAGATTGTGAGGGAGGAGACCATCTATGTTCCTGTCATAGAAAGACCACCGTCCGTGAAGTCTATCATACACAGAAAGAGCAGTCCACCTCGAGCTGCAATTTCCAAGAAGGCAGCGGCCACTCCTTCTGAGTCCCAGACAATGCAGGACGAGAAAAGACACAGCTGTCCCGAGTGTCACAAAGAGTTTCGGTTCGAATGTCTGCTGAGGAATCACATGCGCACTCACACGGGTGAGCGGCCATTCCAGTGTTCAGACTGTGGCAAAAGCTTCAGGTGCCTCAGCTTCTTGACGAATCACATCAAAACGCACTCGCTTGCCAGACCTTTCAAATGCATACAGTGTGTCAAGACGTTTCGCAAAAAAGCCGACCTCATCAAGCACATTCGTGTGCACACAGGTGAAAAACCATACAAGTGCACCATCTGTGGCAAAAGCTTCTCTCAAGGCTCATACTTGAAGATTCACCGCGAATGCCACACCTCAGAGAACCTGCACCAGTGTCCTCACTGTGACAAGAGTTTCCCGACAGCATTTAAGCTGTCCATTCATGTCCGCTACCATTCCATGGATCGCTCATATCAGTGTAACCAATGTGGGAAGAGCTTCATCTATGCCAGCCTCCTTCGAAGACACAAAGGTTATCATGCAGGTGAGCGCCAGTATCTGTGCTCCATCTGCGGTAAGTCCTTCGTCTACATGTTCGACTTGAAAAAGCACCAGCGCAACCACGAGAGACCGCGGATCAAGATCCCATGCACGCTTTGTAACAAGACGTTTGCGGGACCCGAGATGCTGAGGTGCCATCTGCGCATACACACCGGAGAGCGTCCATTCCGCTGCAAAATCTGTGGAAAAGCATTCTCTCAGATTGGGAACATGAAGAGACACGAGCGCGTACACACAGGCGAGAGGCCATTCACCTGTGAAAGATGCGGGAAGACGTACAAGCACTCTTCTCATTTGAAGAACCACATGCTCAGCCACACGGGCGAGCGGCCGTGGCAGTGCTCTCATTGTGGGAAGAGCTTCAAATTTGCTGGGCCTCTTAAGAAACATGAGAGAACTCACTTGGGTGAACGAGGAAATCGTAGAAGGAATTACGACCAAACACGTAGCCGCATGAAAACAGAACACAAAAGTCCTTAATTAAATGTAGGGATATTGCAGCTTAACAATGATCAGATGACACATGATTATCTAGTTATTACTTTAAAAGGTAATATAATTGTGTTTCCCAAACAATGCTTTATGCAGTTCATTATTGAAACTGCACACAGAAATACTTTATAAATTTACActtttgtagtatttaaaaggaatagttgactAGAAATAGAAGGTTTGCTGACAGtttaccctcaggccatccatgGTGTAGAACTccaagtttaaaaaatgtatttaaattgaatttattctttaaaagattaaaatgtaacacaCATCTTTTTGCAACACAAGGCATTacttgatggactggagtggcatggtatggattacttgtggattattgttatgcttttatcagctgtttggacttctATTTTGACAGCTcctattcactgcagaggacccatTGCAGactgatgtaatgctacatttcttcaaactatttccaataaaaaaaaacactatat

Function

symbol description
si:dkey-14d8.1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within telomere capping. Predicted to be part of shelterin complex.

NR:

description
PREDICTED: zinc finger protein 737-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236885.1 False 3013 mRNA 0.45 7 1604789 1609142
XM_043236887.1 False 2995 mRNA 0.45 7 1604789 1609142
XM_043236888.1 True 3241 mRNA 0.43 7 1604992 1609142

Neighbor

gene id symbol gene type direction distance location
cd9b LOC107658922,LOC107725937,LOC107583958,LOC107656430,LOC107711492 coding upstream 29375 1568264 ~ 1575414 (+)
LOC122342591 LOC107579910,LOC107711477,LOC107656438,LOC107584057,LOC107658998,LOC107725909 coding upstream 78581 1521620 ~ 1526208 (+)
ntf3 LOC107658772,LOC107584056,LOC107725959,LOC107656423,LOC107579734,LOC107711475 coding upstream 85149 1504044 ~ 1519640 (+)
tbc1d30 tbc1d30,LOC107658925,LOC107725910,LOC107584031 coding upstream 118112 1473753 ~ 1486677 (+)
zgc:194209 zgc:194209,LOC107584030,LOC107658744,LOC107725912 coding upstream 136312 1463584 ~ 1468477 (+)
LOC122342485 osgep,LOC107656414,LOC107583976,LOC107579596,LOC107658895 coding downstream 12937 1622079 ~ 1624891 (+)
si:ch211-214j24.15 LOC107658740,LOC107725906,LOC107584035 coding downstream 20451 1629593 ~ 1634607 (+)
snap91b si:ch211-214j24.9,LOC107583964,LOC107725923,LOC107658883,LOC107711483,LOC107656397,LOC107579412,LOC108443062 coding downstream 26035 1635177 ~ 1653759 (+)
atp6v1e1b atp6v1e1b,LOC107658907,LOC107583987,LOC107711482,LOC107579815,LOC107725938,LOC108442797 coding downstream 49212 1658354 ~ 1661399 (+)
ada2b cecr1b,LOC107583967,LOC107656410,LOC107711479,LOC107658918,LOC107725927,LOC107581132 coding downstream 52408 1661550 ~ 1666145 (+)
G24968 LOC107583957,LOC107656385,LOC107579307,LOC107711491 non-coding upstream 47011 1556392 ~ 1557778 (+)
G24925 NA non-coding upstream 317716 1286612 ~ 1287073 (+)
LOC122342413 NA non-coding upstream 477409 1112895 ~ 1127380 (+)
G24811 NA non-coding upstream 671678 864840 ~ 933111 (+)
G24768 LOC107718544,LOC107658747,LOC107590532 non-coding upstream 953196 649509 ~ 651593 (+)
G25071 NA non-coding downstream 79836 1688978 ~ 1693389 (+)
G25030 NA non-coding downstream 179489 1788631 ~ 1789276 (+)
G25086 NA non-coding downstream 221536 1830678 ~ 1830968 (+)
LOC122342405 NA non-coding downstream 290754 1899896 ~ 1901886 (+)
G25192 NA non-coding downstream 296688 1905830 ~ 1906106 (+)
LOC122342419 coa6,LOC107726010,LOC107583951,LOC107658937 other upstream 272946 1329452 ~ 1331843 (+)
ndufa5 ndufa5,LOC107725958,LOC107658774,LOC107579922 other upstream 313565 1288297 ~ 1291224 (+)
LOC122342481 LOC107584054,LOC107658775,LOC107725972,LOC107711476,LOC107581286,LOC107656415,LOC107725915 other upstream 355620 1245578 ~ 1249169 (+)
G24771 plekha5,LOC107584023,LOC107658747 other upstream 939259 654092 ~ 665530 (+)
gpr22a gpr22a,LOC107658958,LOC107583929,LOC107729153,LOC107708019,LOC107590528,LOC107656448 other upstream 1165437 434343 ~ 439352 (+)
LOC122343488 NA other downstream 61370 1670512 ~ 1672959 (+)
LOC122342451 NA other downstream 175095 1784237 ~ 1788096 (+)
lyrm5a LOC107725960,LOC107578730,LOC107658915,LOC107710125,LOC107583994 other downstream 385098 1994240 ~ 1995536 (+)
ninj2 ninj2,LOC107725989,LOC107584020,LOC107743858,LOC107656339,LOC107658851,LOC107581271 other downstream 1490595 3099737 ~ 3117994 (+)
erc1b erc1,LOC107725987,LOC107656325,LOC107580227,LOC107743718 other downstream 1510373 3119515 ~ 3306758 (+)

Expression


Co-expression Network