foxm1 (LOC107658881,LOC107710101,LOC107656265)


Basic Information

Item Value
gene id foxm1
gene name LOC107658881,LOC107710101,LOC107656265
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1979107 ~ 1985058 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236892.1
ATGCGCACAAGAGTCCAGGGACTCGAGTTTTTCATTCACTCCCATCAAAGTACATTTTATCACTCAGCGCTGCCAGATTAACTCCAATAAACCACCGTCTGCACGGCTGACATGATATGAAGACAGTCATCAGCCAGGCCTTCTTGCTGTGAGCAAACAATGAGAGAGAGCCCAAGGAGACCCATCATCCTGAAGAGGAGAAAGCTGCCATTTCAGAAGAATGAATCTGATGCAGGGTGTGATGAGGCCGATGGGCCCCGCTGCAAGACCACCCCGACCCCGTCCACCGCCCGCTGCTTCCCCGATGGCATCCGCATGATGGACCACCCCACCATACCGGACACTCAGGTGGTGGTGATCCCGAAAGAAGCTGATCTGCAGAGTGTCATCAGTGCCCTGACGGCCAAAGGGAAGGAGTGCGGCCCTCAGGGACGAAACAAGTTCATCCTGCTCAGTGGCAGCAGCACTTTGGAGGAGAGCAAAACCCTCGGGTGTCTTTCTACCGAGCCCAAGCGTGATCTTGAGAAAGTGAAAACGGAGACGGAGTGCTTCCCGCTTGATGACAGTCTGACCAACATCCAGTGGCTGGGAAAAATGAGCTCTGATGGGCTCAGATCGGAGTCGAACCAAAAAGGCACCAGCAAAGACAATCCGAGTGACTGTCATCAGCCCAAAGCTCCAGAAAAGGAGAAGGACCCTCTGTCAGAGAGACCCCCGTATTCTTACATGGCTATGATCCAGTTTGCTATCAACAGTAAGAAGAACCGACACAtgaccctgaaggaaatttatAACTGGATCGAGGACCATTTTCCGTATTTCAGAAATGTTGCCAAACCCGGATGGAAGaattccATCCGTCATAATCTCTCACTGCATGACATGTTTGTTCGGGAGACATCTGCCGATGGCAAGATCTCCTATTGGACGATTCGACCAGAAGCAAACCGCTGTCTTACATTGGACCAAGTCTACAAGCCTTTGGTTGACCCAGTGACCCCCACTTGCTCTCAGATCCCACAACTTGGTTTCAATCAAcAACAGAAGAGAGGTCCACCGGAGCTGAAGAAAGCCATACCTGCCACGGCCAGCACAGAGAGGAAGATGAAGCCGCTTCTTCCTCGGACTGATTCGTACCTGGTTCCCATCCAGCTTCCTCTGGGTCAGTCGCTCTTCCTGCCCTCCACCAGTCCTGCGACTCTCTCCACTCCTCCCAGCTCCAGTGGGATGAGCAAGAGGGTCCGCATTGCCCCTAAGGTCTCACAGAGTGATGCGAGCTCTGTGATGCTGTGTGCGTCCACCTCTCAGGACATAAAGGAGGAGCCTGTGAGCATGTCTGTGACTCCTGAAGCTCTGCCCTCCAAAACCAGACAGCGAGAAAACAGCAGCTCCCGCCGCAAACAGCGTCTAGTCCTGCCAGCCACCGAGGAACCCGTCCTGCTCTACCCCGACAGCACTCTCTTCGACTCGGGGGTGGTCTCCGACGTCTCCACCTTCCAAGACACTCACGATCCGGAGGCCCAGCCCACCTGTAAACCTGACCTCGACAGCCCAAACAGAGAATACACTTTTAAAACGCCCATCAAGAGCGGCCACCCTTCCTCATCCACCCCCAGTAAGCTTCCCGCAGTCCTGGAGCCATGGAGGATCACCCCCGTCGGAAAGGGAGGCGTGCTGGACTTCAGCCCCATCCGTACTCCCAGCGGGCCACAGCTGACCCCGCAGCGGCACGAACACACGCCTTTCAGCTTCAATAGCACGCCTTTCAAAGAGCTGCCGCTCTTCAGCTCCCCTCGAGAGCTGCTCACCTGCTCCAGACCCTCTCCGAGACGCTCCACTCCGACCTGCTCCAGAGAGCTACTGCAAGTGGGCACCGCCAACCGCTCCCTCACCGAAGGCCTCGTCCTGGATACCATGAACGACAGCCTTAGTAAAATCCTAGTGGATATTAGCTTCCCTAACCTGGACGATGATGATCTCAGCATGGCAAACATCAGCTGGTCCCAGTTTATCCCGGAGCTCAAGTGACTCCAGTTTCTTTTTCCAAGCTGCTCTCAACTTTCTTCACTGCCTTTGATTCTCATTTACTTGCTATTGATCTcttaattattttcttaatttctgTTGCTATTTCACTGCCTTTTACtgtacatgtttgtgtttttgatgtGTAGGCCTTTATTTGCGAGCAAAACTGTTAGTGACGAATGTACTTAGATAAGATAAATTTGCACAagttgtaatatataaatatgaatgcgtgtgtgagagagaaagagcgtgTATTATAAGTGAACATACAGATTTAGcagattaattaaattacactaCTCAATTTTAtagtgtttctttgttttggaaTGATTTTGAACACCTTGGATTAGCCAGAGATGGATGGTAAaaatagaggtttttttttttttttttttttttttttttacagaaatttgGGGCAGAAAAAATTAACATACaaattaaagggaaagttcacccaaagattAACTCATTCTTCTGTTGAatacaacacatttttaaagaatgttagTGACCAAACAGTTGACAGTAACTATAGTAGTATTTTTTTGGATACCAACattctcagtttttttcttttctaaaccgAAGGAAGAAACCCACAGGTTGtgaataaacaatgacagagttcatctttgggtgaactatcccttagtTGTTTATTGATTGCAGATGGATGTGTAAGTGTTGTCCTGTACTAGAATTTGCCAGTCATTTATCTGGAGTGTGTGGAGCTGTTTATAACAtccataatgtgtttttatggttaCAAGCATGTCAGAATAGTGACTCATCTCTGCTGCTTttctgcattcatttgtttttgcaattaaaatcgATTTAAGATTGTGTGCTGAATGTTGGTTGGGCATGACCAGGATGAGACTTTCAAGAGATTTGTGGTGTATTACAAAgcttttaatgttcattttcatatGTAGAATGATTAGTGAGCATGCACAGAGTTCATATATGCTTAGAAGACTACCATCAATATGTAGCTTTGTTCATTTGATACATTGTATTGCATTCTTCCAATGTAAAAACAGCAAGatatcaaaaaaatgtacaaaaactgaA

Function

NR:

description
forkhead box protein M1 isoform X1

GO:

id name namespace
GO:0032873 negative regulation of stress-activated MAPK cascade biological_process
GO:0046578 regulation of Ras protein signal transduction biological_process
GO:0009888 tissue development biological_process
GO:0000122 negative regulation of transcription by RNA polymerase II biological_process
GO:0071156 regulation of cell cycle arrest biological_process
GO:0001570 vasculogenesis biological_process
GO:0008284 positive regulation of cell population proliferation biological_process
GO:0001889 liver development biological_process
GO:0007389 pattern specification process biological_process
GO:0045944 positive regulation of transcription by RNA polymerase II biological_process
GO:0051090 regulation of DNA-binding transcription factor activity biological_process
GO:0009790 embryo development biological_process
GO:0005634 nucleus cellular_component
GO:0005667 transcription regulator complex cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0008134 transcription factor binding molecular_function
GO:0003690 double-stranded DNA binding molecular_function
GO:0008301 DNA binding, bending molecular_function

KEGG:

id description
K09406 FOXM; forkhead box protein M

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236892.1 True 3114 mRNA 0.47 9 1979107 1985058

Neighbor

gene id symbol gene type direction distance location
pgm3 pgm3,LOC107579473,LOC107656266,LOC107658887 coding downstream 6697 1965852 ~ 1972410 (-)
ccnc ccnc,LOC107656373,LOC107583980,LOC107579661,LOC107726029 coding downstream 19064 1954054 ~ 1960043 (-)
faxca faxca,LOC107726027,LOC107710104,LOC107656374,LOC107579532,LOC104925628,LOC108279701 coding downstream 25591 1946529 ~ 1953516 (-)
tmem63a tmem63a,LOC107726051,LOC107583960,LOC107658879,LOC107710129,LOC107656375 coding downstream 61957 1907494 ~ 1917150 (-)
vegfab vegfab,LOC107658905,LOC107726022,LOC107710132,LOC107656377,LOC107579754 coding downstream 116913 1851243 ~ 1862194 (-)
slc5a8 LOC107710085 coding upstream 10384 1995442 ~ 2000075 (-)
arl1 arl1,LOC107576237 coding upstream 37267 2022325 ~ 2024209 (-)
tnnt2e tnnt2e,LOC107658902,LOC107725993,LOC107656364,LOC107710083,LOC108425385 coding upstream 47765 2032823 ~ 2042861 (-)
tmem168a tmem168a,LOC107658875,LOC107726047,LOC107710117,LOC107656353 coding upstream 430608 2415666 ~ 2423463 (-)
gpr85 gpr85,LOC107580073,LOC107710116,LOC107726048,LOC107658873,LOC107584006 coding upstream 482029 2467087 ~ 2471272 (-)
G25190 NA non-coding downstream 75646 1903185 ~ 1903461 (-)
G25188 NA non-coding downstream 80850 1896886 ~ 1898257 (-)
G25185 NA non-coding downstream 133707 1845129 ~ 1845400 (-)
G25182 NA non-coding downstream 147588 1831171 ~ 1831519 (-)
LOC122342506 NA non-coding downstream 149519 1825186 ~ 1829588 (-)
G25240 NA non-coding upstream 6934 1991992 ~ 1993756 (-)
G25277 NA non-coding upstream 47183 2032241 ~ 2032656 (-)
LOC122343450 NA non-coding upstream 121706 2106764 ~ 2118325 (-)
G25298 LOC107549254,LOC107563058 non-coding upstream 177472 2162530 ~ 2163319 (-)
G25299 LOC108267243 non-coding upstream 178368 2163426 ~ 2163708 (-)
rsph9 rsph9,LOC107658900,LOC107583979,LOC107579672,LOC107710090,LOC107656226 other downstream 76444 1898403 ~ 1902663 (-)
ccdc167 ccdc167 other downstream 324281 1653591 ~ 1654826 (-)
zgc:113263 LOC107658878,LOC107583959,LOC107725918,LOC107656382,LOC107711463 other downstream 360809 1609360 ~ 1618298 (-)
selenoo2 selenoo,si:dkey-14d8.2,LOC107579362,LOC107711485 other downstream 374417 1594284 ~ 1604690 (-)
LOC122342802 LOC107711465,LOC107656235 other downstream 392918 1580480 ~ 1586189 (-)
cald1a cald1a,LOC107583995,LOC107725991,LOC107658884,LOC107656362,LOC107710121 other upstream 57895 2042953 ~ 2088579 (-)
tnni4a zgc:101560,LOC107725970,LOC107584059,LOC107658770,LOC107656258,LOC107581287 other upstream 106293 2091351 ~ 2097801 (-)
dock4b dock4b,LOC107656358,LOC108425388 other upstream 314577 2299635 ~ 2375716 (-)
LOC122342907 NA other upstream 487226 2472284 ~ 2473068 (-)
ccdc3a ccdc3,ccdc3a,LOC107725961,LOC107658768,LOC107580337,LOC107744050 other upstream 1014824 2999882 ~ 3012214 (-)

Expression


Co-expression Network