cog5 (cog5,LOC107583928,LOC107658957,LOC107656447,LOC107590548,LOC107729135,LOC106609192)


Basic Information

Item Value
gene id cog5
gene name cog5,LOC107583928,LOC107658957,LOC107656447,LOC107590548,LOC107729135,LOC106609192
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 383479 ~ 449062 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236900.1
CGCGATGTTTGTCACGATGACGTCAGTCGagctcattaatattcatgaccAATCGCCGTTGCTCTCCATTCATGTTGTGACGCAGGAATTGCGCGTCACCGATGAAGTGGCAAAGATGGACGCCAGTCCGGAATCAACAGCGAATTCCCTGCTGAAAGATgAGTGCTTTACGGACTTCCTTAAAGAGGATTTCGACGTGAAGACCTACACAGCTCAAGCCATCCATCACGCTGTCATCGCAGAACAGCTGGCGAAGCTGGCAGAGGGCATCAGTCAGCTGGACAAAGAGCTGCACTGCCAGGTGGTGGCCAGACATGAGGATCTACTAGCTCAGGCGACAGGGATCGAATCTCTCGAAGGTGTCTTACAAATGATGCAGACCAGAATTGCAGCTCTCCAGAGTGCTGTGGACAGgATACGGACCAAAATCGTTGACCCTTACAATAAGATTGTGGCCCGGACAGCCCAGCTCGCCCGCTTGCagGTGGCGTGTGACCTGTTGAGAAGAATCATTCGCATCCTGTACCTGAGCAAACGACTGCAGGGGCAGCTGCAGGGGGGCAGCAGAGAGATCACTAAAGCGGCCCAGAGCCTGAACGAGCTGGACTACCTGTCCCAAGGTGTTGATCTGTCAGGTATTGACGTCATAGAAAATGACCTGCTGTTCATCAGCCGAGCTCGTCTGGAGGTTGAGAACCAAGCCAAGCGCTTACTGGAACAGGGCATGGAAATtcagAATCCCTCTCAGGTGGGAACAGCCCTACAGGTGTTTTACAACCTTGGCAATCTGAGAGAGACTATAAGAAGTGTAGTGCATGGATACAGGACATCTGTGCAGGAGAATGTTGTTAATGCCCTGGACATTAAAGTCCTAACTCAACCTGCTAACACTAGAGGTGCCCCTGGAAGAGCTGTCATGCCCACCCCAGGGAATACAGCTGCGTTTCGAGCTGCCCTTTGGACAAATTTAGAGAAACTAATGGACCAGATCTGTGCAGCGTGTGGTCAGGTGCAGCACCTGCAGAAGGTTCTAACCAAAAAGAGGGACCCAGTGTCTCATGTCTGCTTTATTGATGAAATAATCAAGGATGGGCAGCCTGACATCTTGCACACCTTCTGGAGTTCAGTCACTCAGACGCTCTCCGAGGAGCTGCAGAAAGCCACAGCTGCATCAACCTTCCTGAAGCAGGCTCTGGAGGGAGAGTATCCCAAACTCTTGAGGCTTTATAATGAGCTATGGAAGAGGCTGCAGCAGTACAGCGCTAGCATACAGGGGGCGCTAGTGAGTAGTGGTGCAGGTCTTGATGTTGAACTGCCAGTGTCAGAGCATGATACTGAAGATTTGTTCACCCGGACCAAACCAGACTATGAtCCAGAGAAAGACCTAAAGGACTCCCTTCAGCCATATGAAGCAGCTTACCTGTCCAAGTCTCTGTCCCGTCTCTTTGACCCCATCAATCTTGTGTTCCCTCAAGGCGGCCGAAACCCACCCTCTAATGATGAACTTGATAGCATCATAAAAACAATAGCCAGTGAGCTGAATGTTGCATCAGTGGATTCCGGCCTGACGATCGCAGTCGCCAAGAACGCCGCCAAGACCGTGCAGCTTTTCTGCGTCAAGTCAGAGCAGTTgCTGTGTACACAAGGAGATGCCAGTCAGGTGATCGGACCCCTGACGGAGGGTCAGAGAAGAAACATTGCTGTAGTCAACTCTCTTTTCCGCCTGCAGCAAGCTGTGGCTAAAGTTATATCTGGACTGGGTACCTTCCCTCCTGCAGCAGAGCAATCGCTCACAGCTTCTTTAGagTCGGTTCAGGCTCTGATGAGTAGCGCCGTTCAGCCACTGCTAAATTCCGTTACTGACTCTGTCGAAGCAATACTCATTACAATGCACCAGGAGGATTTCTCTGGTCCTTTACCCGCAGGTGGTCGTCCGGACGTGCCGTGCTCTCTGTACATGCGTGAGCTGCAGGGCTTCATTGCACGAGTGATGAACGACTACTTCCGCCCACTGCAGTGTCTGGACTTCCTTTATGATAGTACAGAGATCATTGCCCAGCGTGCCATCACCCTCTTCATCCGCCACTCTAGCCTCTTGCGGCCACTCGGAGAGGGAGGGAAGATGAGGTTGGCAGCTGACTTTGCTCAGATGGAGCTGGCCGTGGCTCCTCTCTGCAGACGGGTTTCAGACCTGGGGAAAGCGTACCGTCTCTTGCGGTCTTTTAGACCGCTGCTGTTTCAAACGAGTGAGCACATCGCTAGCAGTCAAGCGCTGGGAGATTTGATTCCGTACAGCACCATATTGCATTTCCTGTTCACTCGTGCCCCGGCTGAACTCAAATCACCACATCAgGGGGGCGCTGGAGGCATATGTGCAGTCTGTCCGAGCCAGGCAGGGGAAGGAGTTTGCTCCGGTGTATCCCATCATGCTCCAGCTGCTGCAGAAAGCCACGAGCATCTCGTAGGATCTGCAAACAGAGCCCCGTCTCATCACCATAATGTAGACGAGTTCGCCATAACAATACACAAAGAAGtctttattaaacttaattacgttataataattttgttgaagtcaaaaatgaatgtgtataggtttattatgtatttttatgggttgtttgattattattacGGGCTAGGAATTCTTACCTACATATATTTCAAAAGGATCTGTTTTGCTTGGGTGCAGAATTATTACTAAACACGTCATGTAAAAGCTGATTAAAGAATGTGTTATGCCTTCA
>XM_043236901.1
CGCGATGTTTGTCACGATGACGTCAGTCGagctcattaatattcatgaccAATCGCCGTTGCTCTCCATTCATGTTGTGACGCAGGAATTGCGCGTCACCGATGAAGTGGCAAAGATGGACGCCAGTCCGGAATCAACAGCGAATTCCCTGCTGAAAGATgAGTGCTTTACGGACTTCCTTAAAGAGGATTTCGACGTGAAGACCTACACAGCTCAAGCCATCCATCACGCTGTCATCGCAGAACAGCTGGCGAAGCTGGCAGAGGGCATCAGTCAGCTGGACAAAGAGCTGCACTGCCAGGTGGTGGCCAGACATGAGGATCTACTAGCTCAGGCGACAGGGATCGAATCTCTCGAAGGTGTCTTACAAATGATGCAGACCAGAATTGCAGCTCTCCAGAGTGCTGTGGACAGgATACGGACCAAAATCGTTGACCCTTACAATAAGATTGTGGCCCGGACAGCCCAGCTCGCCCGCTTGCagGTGGCGTGTGACCTGTTGAGAAGAATCATTCGCATCCTGTACCTGAGCAAACGACTGCAGGGGCAGCTGCAGGGGGGCAGCAGAGAGATCACTAAAGCGGCCCAGAGCCTGAACGAGCTGGACTACCTGTCCCAAGGTGTTGATCTGTCAGGTATTGACGTCATAGAAAATGACCTGCTGTTCATCAGCCGAGCTCGTCTGGAGGTTGAGAACCAAGCCAAGCGCTTACTGGAACAGGGCATGGAAATtcagAATCCCTCTCAGGTGGGAACAGCCCTACAGGTGTTTTACAACCTTGGCAATCTGAGAGAGACTATAAGAAGTGTAGTGCATGGATACAGGACATCTGTGCAGGAGAATGTTGTTAATGCCCTGGACATTAAAGTCCTAACTCAACCTGCTAACACTAGAGGTGCCCCTGGAAGAGCTGTCATGCCCACCCCAGGGAATACAGCTGCGTTTCGAGCTGCCCTTTGGACAAATTTAGAGAAACTAATGGACCAGATCTGTGCAGCGTGTGGTCAGGTGCAGCACCTGCAGAAGGTTCTAACCAAAAAGAGGGACCCAGTGTCTCATGTCTGCTTTATTGATGAAATAATCAAGGATGGGCAGCCTGACATCTTGCACACCTTCTGGAGTTCAGTCACTCAGACGCTCTCCGAGGAGCTGCAGAAAGCCACAGCTGCATCAACCTTCCTGAAGCAGGCTCTGGAGGGAGAGTATCCCAAACTCTTGAGGCTTTATAATGAGCTATGGAAGAGGCTGCAGCAGTACAGCGCTAGCATACAGGGGGCGCTAGTGAGTAGTGGTGCAGGTCTTGATGTTGAACTGCCAGTGTCAGAGCATGATACTGAAGATTTGTTCACCCGGACCAAACCAGACTATGAtCCAGAGAAAGACCTAAAGGACTCCCTTCAGCCATATGAAGCAGCTTACCTGTCCAAGTCTCTGTCCCGTCTCTTTGACCCCATCAATCTTGTGTTCCCTCAAGGCGGCCGAAACCCACCCTCTAATGATGAACTTGATAGCATCATAAAAACAATAGCCAGTGAGCTGAATGTTGCATCAGTGGATTCCGGCCTGACGATCGCAGTCGCCAAGAACGCCGCCAAGACCGTGCAGCTTTTCTGCGTCAAGTCAGAGCAGTTgCTGTGTACACAAGGAGATGCCAGTCAGGTGATCGGACCCCTGACGGAGGGTCAGAGAAGAAACATTGCTGTAGTCAACTCTCTTTTCCGCCTGCAGCAAGCTGTGGCTAAAGTTATATCTGGACTGGGTACCTTCCCTCCTGCAGCAGAGCAATCGCTCACAGCTTCTTTAGagTCGGTTCAGGCTCTGATGAGTAGCGCCGTTCAGCCACTGCTAAATTCCGTTACTGACTCTGTCGAAGCAATACTCATTACAATGCACCAGGAGGATTTCTCTGGTCCTTTACCCGCAGGTGGTCGTCCGGACGTGCCGTGCTCTCTGTACATGCGTGAGCTGCAGGGCTTCATTGCACGAGTGATGAACGACTACTTCCGCCCACTGCAGTGTCTGGACTTCCTTTATGATAGTACAGAGATCATTGCCCAGCGTGCCATCACCCTCTTCATCCGCCACTCTAGCCTCTTGCGGCCACTCGGAGAGGGAGGGAAGATGAGGTTGGCAGCTGACTTTGCTCAGATGGAGCTGGCCGTGGCTCCTCTCTGCAGACGGGTTTCAGACCTGGGGAAAGCGTACCGTCTCTTGCGGTCTTTTAGACCGCTGCTGTTTCAAACGAGTGAGCACATCGCTAGCAGTCAAGCGCTGGGAGATTTGATTCCGTACAGCACCATATTGCATTTCCTGTTCACTCGTGCCCCGGCTGAACTCAAATCACCACATCAgAGAGCGGAGTGGTCTATCTCTCGCTATTCTCAATGGCTGGACGACCATCCATCAGAAAAGGACCGTCTCACTCTTATTAGGGGGGCGCTGGAGGCATATGTGCAGTCTGTCCGAGCCAGGCAGGGGAAGGAGTTTGCTCCGGTGTATCCCATCATGCTCCAGCTGCTGCAGAAAGCCACGAGCATCTCGTAGGATCTGCAAACAGAGCCCCGTCTCATCACCATAATGTAGACGAGTTCGCCATAACAATACACAAAGAAGtctttattaaacttaattacgttataataattttgttgaagtcaaaaatgaatgtgtataggtttattatgtattttt

Function

symbol description
cog5 Predicted to be involved in intra-Golgi vesicle-mediated transport. Predicted to be located in Golgi apparatus and membrane. Predicted to be part of Golgi transport complex. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type IIi. Orthologous to human COG5 (component of oligomeric golgi complex 5).

NR:

description
conserved oligomeric Golgi complex subunit 5

GO:

id name namespace
GO:0006891 intra-Golgi vesicle-mediated transport biological_process
GO:0017119 Golgi transport complex cellular_component

KEGG:

id description
K20292 COG5; conserved oligomeric Golgi complex subunit 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236900.1 True 2747 mRNA 0.50 21 383479 449062
XM_043236901.1 False 2692 mRNA 0.51 22 383614 449062

Neighbor

gene id symbol gene type direction distance location
e2f7 e2f7,LOC107707966,LOC107658780,LOC107656240,LOC107576735,LOC107584022 coding downstream 153 371870 ~ 383326 (-)
csrp2 csrp2,LOC107708016,LOC107658959,LOC107656449 coding downstream 14056 360167 ~ 369423 (-)
nap1l1 nap1l1,LOC107656454,LOC107555881,LOC107658961 coding downstream 115714 253266 ~ 267765 (-)
phlda1 phlda1,LOC107708012,LOC107658781,LOC107656271,LOC107729151 coding downstream 131058 250141 ~ 252421 (-)
krr1 krr1 coding downstream 178115 199811 ~ 205364 (-)
pde3a pde3a,LOC107590531,LOC107656239 coding upstream 51542 500604 ~ 580345 (-)
aebp2 aebp2,LOC107708024,LOC107658952 coding upstream 180003 629065 ~ 640725 (-)
plekha5 plekha5,LOC107656381,LOC107718544,LOC107590532,LOC107658747,LOC107707963,LOC107584023,LOC106609184 coding upstream 194386 643448 ~ 774561 (-)
LOC122342410 NA coding upstream 666329 1115391 ~ 1120658 (-)
LOC122342412 NA coding upstream 673605 1122667 ~ 1125124 (-)
G24724 LOC107555883,LOC107708011,LOC107658963 non-coding downstream 170233 212605 ~ 213246 (-)
G24712 NA non-coding downstream 174659 205893 ~ 208820 (-)
G24713 NA non-coding downstream 189320 191396 ~ 194159 (-)
G24792 NA non-coding upstream 155821 604883 ~ 605114 (-)
G24795 NA non-coding upstream 163329 612391 ~ 612843 (-)
G24796 NA non-coding upstream 164065 613127 ~ 613653 (-)
G24799 NA non-coding upstream 171115 620177 ~ 620588 (-)
G24802 NA non-coding upstream 174267 623329 ~ 624257 (-)
osbpl8 osbpl8,LOC107555879,LOC107656451 other downstream 41526 279998 ~ 341953 (-)
G24708 NA other downstream 192237 186460 ~ 191242 (-)
si:dkey-97m3.1 NA other downstream 309798 47610 ~ 73681 (-)
LOC122343420 wasla,LOC107753630,LOC107598884,LOC107659464,LOC107725914,LOC107658745,LOC107656407,LOC107698525,LOC107752346,LOC107575727 other downstream 349552 19991 ~ 33927 (-)
G24689 asb15b,LOC107726003,LOC107658939,LOC107583946,LOC107656400,LOC107711503 other downstream 372378 10833 ~ 11101 (-)
pik3cg pik3cg,LOC107658948,LOC107656384,LOC107583938,LOC107705338,LOC107590535,LOC107584052 other upstream 415622 864684 ~ 933108 (-)
G24875 NA other upstream 620098 1069160 ~ 1070096 (-)
ptprz1b ptprz1,ptprz1b,LOC107725913,LOC107656236,LOC107658935,LOC107581028 other upstream 840252 1289314 ~ 1323397 (-)
LOC122342802 LOC107711465,LOC107656235 other upstream 1131418 1580480 ~ 1586189 (-)
selenoo2 selenoo,si:dkey-14d8.2,LOC107579362,LOC107711485 other upstream 1145222 1594284 ~ 1604690 (-)

Expression


Co-expression Network