si:dkey-14d8.21 (LOC107725922,LOC107583962)


Basic Information

Item Value
gene id si:dkey-14d8.21
gene name LOC107725922,LOC107583962
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1792307 ~ 1797892 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236919.1
ATGCTGTACTTTCTGAGCTTCGTTCTGCTCCTAGACAGTGTAGATAATGCAGCCGTCAGTAAAACCAGTGTGACCAGTGATGCTCCGGTGAGGTTGATGGACAGTATTAATGCTTGTTCTGGAAGGGTGGAAATATACAAAGACAGCGAGTGGGGCACCATTTGTGACGAAGGGCTGGATGATGTCGAAGGCAACTCGGTCTGCTACGAGGCGGGCTGCGGTCCTCTCATATCCATTCAGCCTAGTGCTTTCTTTGGGGAGGGTTCGGGACCGTTGCTGACGGATGATCTAAACTGTTCTGGGAACGAGAGCTCGGTGCTCGACTGTAACTGGGGGAACCATACAGACGTGTGTGACCACACCAGAGATGCTGGAGTCATCTGTGACTCCACCCTTAGGTTACAAGGCGGCAGCGGCATGTGTTCAGGGAGAGTGGAGATCTTCCACAACAGACAGTGGGGGACGGTCTGTGACACAACCTGGGATATCTTGGACTCAGTGGTGGTCTGTAAAGAGCTTGGCTGTGGAAGCCCAATAGCTTCATACTACAACGCTTATTTCGGGAAGGGAGCGGGTCCAGTATGGATGGATGGCATCAGCTGCACTGGTCGTGAGGGTGGTCTGAAGGACTGTGTGTTTAGCGGTTGGGGGGTCACCGCTTGCACCCATGCAGATGATGCTGGAGTCACTTGCTCAGAGTTTATGCTTGTAGATGGACTAAACACTTGCTCTGGGAGGGTGGAGGTCCTCTACGAATATTTGGGCTGGGGAACTGTTTTGGACAACGGCTGGAATTTGTTGGGTGGAGATGTGATCTGCAGAAACATGGACTGTGGAAGTGCGCTGAGCGTCAGTGGTGGATCTGCTTTTGGGAAGGGTTCAGGTATGGCGTGGACATACGATGCTGCGTGCACAGGAACTGAAATCTCCCTGAAACCATGTCTGTCAGGCTACGTGAAAAAGAGTTCACACAGCAATGACGCTGGAGTGGTCTGCAGAGAGGTGAAACTGGTAAATGGCCAAAACATGTGTGAAGGCACAGTGCAGGTTCATTATACTGGAGACTGGGGCACAATATGTCACACAAACTGGGATCTACTGGACGGTATTGTGTTGTGCAGAGAACTCGGCTGCGGTCCTCTTAAACTGATACACATCTCAGCTGCCTTTGGGAACGGTACTGGAAATATACTGATGGATAATGTTCTGTGCACCGGGAGCGAGTCCTCACTGAAAGAGTGTGGTCAAGCTACATCAGTAAACAGCCTCTGTACACATTCACAGGATGCCGGAGTCTCTTGCGgagATGTGAGATTGGTCGGTGGAGAGAGCATTTGTTCTGGAAGAGTGGAGGTTCTTAAGAACAACCAGTGGGGAAGCGTTTGTGCAGACAGCTGGGATATGACCGATGCTGCAGTAGTCTGTAGAGAGCTGGGTTGTGGAAGTCCAGTAGAGGTGAACAAAGGTGTTTACGGAAGCGGTATTGGACAGATATGGATGGATGATGTGGCATGTACAGGCACTGAGCCCACGCTGAAGAACTGCAGGTCAAACGGATGGGGACAGCACAACTGTGTGCACGCAAATGATGCAGGCGTCGTCTGCCGAGAGGTACGGTTGGTGAATATGGATAACCCCTGTCAGGGCACAGTGCAGGTGTATCACGACGGCCGCTGGGGGACAGTGTGCCACAACAGCTGGGATATCGCTGATGGTTTAGTGCTCTGTAGAGAGCTGGGCTGCGGTGGGAACGCACAGCCCTTGTCAGGTGCCTTTTTTGGGGCCGGTGATGGGCCGATATGGATGGATTCGCTCAGATGTAACGGTGATGAGTCAAACTTGAGAAGTTGCCAGTTTGGTGGCTGGGGAAACCATCAATGCATTCATGCGTATGATGCAGGAATCATCTGCAGGGaaataaaaaatgtgctcAGGATCGAGGTGAATGCTGACTATGTAAACCCCAACGACTCTTCACACATGACCAAAATACTGGACAAGGTCAAGGAAGAGCTCAAAAGGACCGGAAATTTCTCTGTCAAGTGGAGAACTCAGATAAACGGACAAGTGTTTCAGGAAAAGAAATTATTTGATCCCtgacagGATTCAACAGAAAACTGCTCTTACAGAGTCATCCGGACGATGAAGACATtctgtttttgtataaataagtgtttgtataaaaaaaggtttattatatttcacagcATGCTATGAAGAGCATGTTTTTGGGCTGCAGCAGGTCGCTCTAAGTTCTACTCATTTCTGGTGCATCTCTAATTCTGCGTCGCTGGCCATTATTTGATTACTTTCATTGGTAGGAGgtgaaaggaaaataaaaatgtaaaactagtTTTCTTCTTATAGGTTAAATGATTACTTACTTtctgatttaatatattttgtatatttatagaCCAACCTCCTAAAATAAGTCTGATTATATGCTTAactatgtattcatttatatggTGTTACATTTCATTACTTAAATGTTTCC

Function

NR:

description
PREDICTED: deleted in malignant brain tumors 1 protein-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236919.1 True 2500 mRNA 0.48 10 1792307 1797892

Neighbor

gene id symbol gene type direction distance location
strip2 strip2,LOC107725919,LOC107656389,LOC107658739 coding upstream 8624 1762143 ~ 1783683 (+)
ahcyl2b ahcyl2,LOC107725924,LOC107710138,LOC107583963,LOC107658882,LOC107656398,LOC107579442 coding upstream 31938 1732155 ~ 1760369 (+)
tmem209 tmem209,LOC107725925,LOC107658886,LOC107583965,LOC107656402,LOC107579462 coding upstream 60622 1726783 ~ 1731685 (+)
ccnd2b ccnd2b,LOC107725932,LOC107658897,LOC107583977,LOC107656417,LOC107710106,LOC107579638 coding upstream 65986 1717521 ~ 1726321 (+)
ada2b cecr1b,LOC107583967,LOC107656410,LOC107711479,LOC107658918,LOC107725927,LOC107581132 coding upstream 126162 1661550 ~ 1666145 (+)
LOC122343361 LOC107725905,LOC107658738,LOC107584038 coding downstream 2594 1800486 ~ 1804566 (+)
LOC122343360 NA coding downstream 7697 1805589 ~ 1808700 (+)
mapk11 mapk11,LOC107725929,LOC107656380,LOC107579565,LOC107583972,LOC108442323,LOC103035641 coding downstream 11400 1809292 ~ 1816478 (+)
mapk12b mapk12b,LOC107656379,LOC107710136,LOC107579544,LOC108442322,LOC103035956,LOC108279513 coding downstream 20131 1818023 ~ 1822750 (+)
LOC122342504 si:dkey-14d8.7,LOC107583991,LOC107658912,LOC107725942,LOC107656269,LOC107710135,LOC107601130,LOC107579872 coding downstream 25743 1823635 ~ 1825062 (+)
G25030 NA non-coding upstream 3031 1788631 ~ 1789276 (+)
G25071 NA non-coding upstream 98918 1688978 ~ 1693389 (+)
G24968 LOC107583957,LOC107656385,LOC107579307,LOC107711491 non-coding upstream 234529 1556392 ~ 1557778 (+)
G24925 NA non-coding upstream 505234 1286612 ~ 1287073 (+)
LOC122342413 NA non-coding upstream 664927 1112895 ~ 1127380 (+)
G25086 NA non-coding downstream 32786 1830678 ~ 1830968 (+)
LOC122342405 NA non-coding downstream 102004 1899896 ~ 1901886 (+)
G25192 NA non-coding downstream 107938 1905830 ~ 1906106 (+)
G25193 NA non-coding downstream 109308 1907200 ~ 1908927 (+)
LOC122342875 NA non-coding downstream 230904 2028796 ~ 2033049 (+)
LOC122342451 NA other upstream 4211 1784237 ~ 1788096 (+)
LOC122343488 NA other upstream 119348 1670512 ~ 1672959 (+)
LOC122342419 coa6,LOC107726010,LOC107583951,LOC107658937 other upstream 460464 1329452 ~ 1331843 (+)
ndufa5 ndufa5,LOC107725958,LOC107658774,LOC107579922 other upstream 501083 1288297 ~ 1291224 (+)
LOC122342481 LOC107584054,LOC107658775,LOC107725972,LOC107711476,LOC107581286,LOC107656415,LOC107725915 other upstream 543138 1245578 ~ 1249169 (+)
lyrm5a LOC107725960,LOC107578730,LOC107658915,LOC107710125,LOC107583994 other downstream 196348 1994240 ~ 1995536 (+)
ninj2 ninj2,LOC107725989,LOC107584020,LOC107743858,LOC107656339,LOC107658851,LOC107581271 other downstream 1301845 3099737 ~ 3117994 (+)
erc1b erc1,LOC107725987,LOC107656325,LOC107580227,LOC107743718 other downstream 1321623 3119515 ~ 3306758 (+)
G25514 NA other downstream 1683737 3481629 ~ 3502094 (+)
G25551 NA other downstream 1939610 3737502 ~ 3738594 (+)

Expression


Co-expression Network