LOC122342818


Basic Information

Item Value
gene id LOC122342818
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 3531214 ~ 3532749 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236951.1
ATGGTAATAACTCTTTCTGGAAGATTGGAGGTTTTCTATAACAATCAGTGGGGAACAGTGTGTGATAATGGCTGGAATCTGTCAGATGCAAAGGTGGTTTGTAGAGAGATGGGCTGCGGGGATGCTTTTGAGGCAAAGAGTGGTGCTTTTTTTGGACAAGGTGGGgcaaacatatttttgagcGAAATTAACTGTGTTGGAACTGAGTCTACGTTGAGCAGTTGCAGCTCTAAGAAACCGGGACAGTTTAACTGTGACCATTCAAAGGATGCTGGAGTCATCTGTCGCTCCCTTGTCAGATTGGTGAATGGCAGTCACTTCTGTTCTGGACGAGTAGAGGTTCTCAATGATGATCAGTGGGGAACAGTGTGCGATAGCGGCTGGGATTATTCAGATGCTGCAGTGATATGTAAAGAAATGGGCTGTGGGAATGTTTTTGACCTAAGGATCAGTGGGTTTTTTGGGCAGGGATCAGGACCGGTATGGCTAAGTGATGTACAATGTTCTAACACCGAATCAACTCTGAGACAATGTAATTTACAGGGATGGGCAAAAAACTCATGCGGACATGAGAAGGATGTTGCAGTCGCCTGTCAACGCAGAATTATGTTAGAAAATGGCTTCAGTGCTTGTTCTGGAAGAGTGGAAATTTTCTATAATCGCAGTGGATACAATGAGTGGGGAACAGTATGTGATAATAATTGGGATCTAACAGACGCTGCAGTGGTGTGTAGGGAGATGGGATGTGGAAATGCTATAGCAGCAAAGAGCGCTGCTTTTTTCGGAGCCGGTGGGGGTATAATATGGTTGGATAATGTCAACTGCATTGGAAATGAGCTCACCCTCGCAGCCTGTCAGTCCAACAGATTAGAATCTAACAATGTCCATTACAAGGATGTTGGAGTAATCTGTCAATGTAAGTTGGTCTATATAAGAATACTAAAAGAATATTGTAAATGAATattagttaacccaaaaattaaaaactttgttATCATTTAACTCTAGGCTACCAAGACAACACATTGAATTTGTAGGGGAAGAACTAGAATAAAGATTCTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236951.1 True 1064 mRNA 0.42 3 3531214 3532749

Neighbor

gene id symbol gene type direction distance location
LOC122342399 LOC107584032,LOC107579834,LOC107656234,LOC107711464,LOC107725908 coding downstream 73 3528035 ~ 3531141 (-)
LOC122342400 NA coding downstream 4901 3521694 ~ 3526313 (-)
LOC122342398 LOC107584038,LOC107725905,LOC107658738 coding downstream 10286 3518689 ~ 3520928 (-)
LOC122342755 LOC107676321,LOC107716109,LOC107709941,LOC107655767 coding downstream 128873 3400380 ~ 3402341 (-)
LOC122342759 fbxl14b,fbxl14,LOC107580311,LOC107656333,LOC108279751 coding downstream 175073 3354369 ~ 3356141 (-)
LOC122343407 NA coding upstream 179866 3712615 ~ 3721125 (-)
ttll12 ttll12,LOC107581273 coding upstream 192427 3725176 ~ 3751393 (-)
pnpla3 pnpla3,LOC107726050,LOC107743702,LOC107656255,LOC107592239,LOC107580453,LOC108428138,LOC107658728 coding upstream 219618 3752367 ~ 3759739 (-)
mpped1 mpped1,LOC107726058,LOC107658834,LOC107592234,LOC107656320 coding upstream 261190 3793939 ~ 3825403 (-)
scube1 scube1,LOC107726032,LOC107592233,LOC107580481 coding upstream 293275 3826024 ~ 3888154 (-)
LOC122342503 NA non-coding downstream 86323 3442422 ~ 3444891 (-)
LOC122342757 NA non-coding downstream 113297 3416587 ~ 3417917 (-)
LOC122342758 NA non-coding downstream 127712 3402824 ~ 3403502 (-)
LOC122342458 NA non-coding downstream 411664 3117479 ~ 3119550 (-)
LOC122342459 NA non-coding downstream 413917 3116404 ~ 3117297 (-)
G25706 NA non-coding upstream 114314 3647063 ~ 3701306 (-)
G25731 NA non-coding upstream 174840 3707589 ~ 3707894 (-)
G25732 NA non-coding upstream 177275 3710024 ~ 3741805 (-)
G25739 NA non-coding upstream 237372 3770121 ~ 3770329 (-)
LOC122342502 NA non-coding upstream 242691 3775440 ~ 3785720 (-)
LOC122342805 NA other downstream 509702 3019092 ~ 3021512 (-)
ccdc3a ccdc3,ccdc3a,LOC107725961,LOC107658768,LOC107580337,LOC107744050 other downstream 519000 2999882 ~ 3012214 (-)
LOC122342907 NA other downstream 1058146 2472284 ~ 2473068 (-)
dock4b dock4b,LOC107656358,LOC108425388 other downstream 1155498 2299635 ~ 2375716 (-)
tnni4a zgc:101560,LOC107725970,LOC107584059,LOC107658770,LOC107656258,LOC107581287 other downstream 1433413 2091351 ~ 2097801 (-)
LOC122342819 foxp2,foxp4,LOC107725896,LOC107728618,LOC107656011,LOC107675840 other upstream 1913 3534662 ~ 3577123 (-)
LOC122342822 tmem9b,LOC107674442,LOC107750540,LOC107754675,LOC107585953,LOC107700603,LOC107593285 other upstream 68251 3601000 ~ 3601991 (-)
LOC122342823 scube2,LOC107750541,LOC107585952,LOC107674429,LOC107593229,LOC107700597 other upstream 69607 3602356 ~ 3618367 (-)
shank3b shank3b,LOC107725995,LOC107592218,LOC107656300,LOC107580703,LOC107743477 other upstream 601228 4133977 ~ 4161828 (-)
G25880 LOC107658814,LOC107726023,LOC107592209 other upstream 732177 4264926 ~ 4267495 (-)

Expression


Co-expression Network