nap1l1 (nap1l1,LOC107656454,LOC107555881,LOC107658961)


Basic Information

Item Value
gene id nap1l1
gene name nap1l1,LOC107656454,LOC107555881,LOC107658961
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 253266 ~ 267765 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236957.1
GCGACCCGCGTTACGTGGTGACGCCAGATGTATATGAGCGCACGCGGCGGGATCTCTTTCCCTTTTAGCGCCATCAGAGCGGGAGTCTCGCGCTGTTCACTGCGCAGCAGCACCGCCTCAGACAGACCTCTGCACATCGGGCTCTCGaAAACAAAACGGTGAAACAACATGGCAGATCTTGACAATAAAGACCAGACTGAAATGGACCCAGCAGATATGGAGGATGTTGAagaggtggaggaggaagaAACTGGGGAAGACAACAGCAAAGCGCGTCAGCTGACGATGCAGATGATGCAGAACCCTCAGATTCTTGCGGCGCTGCAGGAGAGGTTGGATGGGCTCGTGGGATCTCCCTCAGGGTACATGGAGAGCTTACCGAAGGTGGTGAAGAGACGCGTTAATGCCCTCAAGAACCTCCAGGTGAAGTGCGCTCACATCGAAGCAAAGTTTTACGAAGAAGTGCACGAACTGGAGCGAAAATACGCCGCTTTGTATCAGCCTCTCTTCGACAAGCGGAGTGATATCGTGAGAGCAGCGTACGAACCCACAGATGAGGAGTGTGAGTGGAAAcaagatgaagaggaagagctgacagtAAGTAAGCAGGAGGAAATGAAGGAAAAGGCCAAagtggaggaggagaagaaagacGAGGAGAAGGAAGACCCTAAAGGGATCCCAGAATTCTGGCTCACGGTTTTCAAGAATGTCGACCTTCTCAGCGAAATGTTGCAGGAGCATGATGAACCAATCCTAAAGCACTTACAAGACATTAAAGTAAAATTCTCAGATGCAGGCCAGCCCATGAGTTTCACATTAGAGTTCCACTTCGAACCCAACGATTTCTTCACAAACACAGTCCTGACAAAGACCTACAAAATGAGGTCCGAGCCGGACGAGTCGGACCCCTTCTCTTTCGACGGGCCAGAGATCATGGGCTGCACAGGgtgCACGATCGACTGGGTTAAGGGCAAGAACGTCACGTTGAAAACCATtaagaagaaacagaaacataAGGGACGTGGCACAGTGAGGACGGTCACCAAGACGGTCCCCAATGATTCCTTCTTCAACTTCTTCTCTCCACCTGAAGTTCCAGAAAGCGGTGAACTGGACGAGGACTCGGAGGCCGTGTTAGCCGCAGACTTTGAGATCGGTCACTTCATCCGCGAGCGGATCGTGCCCAGGGCAGTGCTGTACTTCACCGGCGAGGCCATCGAAGACGACGACGATGACTACGACGAGGAGGGAGAGGAAGCGGATGATGagGAGGGTGAAGAGGAGGCCGACGAGGAGAACGATCCAGACTACGAGCCCAAGAAGGACGCCAACCCTCCAGAGGAGTGCAAGCAGCAGTGATGACGATCTCCTTCAGGATCCCCTACACTGTAACGGCTTCAAACAAACATAGTTACTTACCGCCTtacaatgttttgtatttttcttggtagaaataattgaaaaattaaataaaagggtTTCGAGATTTTTGTTACGAAAAAAAAAGacgatattaaaaaaaaaaaccaacaaaaaaccAACGACCACCACCACACACAACTCCTCTATGGAAAGCCGCGGCTCATGACGCATAGTGTTTCACTAGGACCGGTTTCTttcgtttttttccctcttcctCTGTATAAATAGTTAGAATGCAGAAAATCCCTCGAAGCATGACACTCGTTTCTTCACCGCTAAACTAGTTGGGTTCTCGTGAAGTCTTTTGTATTGCTCTTAGACAACAGCTGTGGAAAGACGCTCCGGTTTACGGCTAACATTCCTCCACGGCGTTGGCTGTTTTGGGTTTGGAGGCTCGGTGGAGACTGAAGCACATTCCACATCCGTTCGGTCGGCGCTCTGCTGCATGACTCCTTTCTTTTCTATGAGCACTTTGTATTTTCGTCATGTATCCGTagcgttttattattattatattattatttcccCCTTCAATTCGACCGACGCTTGCGTTTCGACTGGCTTGCCGTTCTTCAGGAGGGTTCTCTGCGGAATGCACTTACGACGACGCGAGCGACCTCATTGGACGATTAGGACGAGAGCGTCTGATTGGAGGAGCCGGTTTAACCggtctctgattggctgctttcTGAGCTTGGCCCTGAGTGATGATTGTGGTGAAACGCCACCTCTGTTTGGCAGGCCTATCActgtgaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcagaggaaGGTCGTCTTCATCTCCTCTCACTCGTAGCGCAGCCCAGCAGGTCTGAAGCAGATAGAGCAATATTTTCACCCGGAAAGCCCCTCCGCCGCCGCAGTATCCCGTGTCTCGTGGCCCAGCTCCGTCCGGGTCACcggttagttagttagttgtGTCTGGTGAGCAGTTGAAGCAGCAGGGGTCTTTCTGGTTCCCCTCAGCAGCTGTTGTCAAAGCAAAATGCCATGCTACAAAATACTAATGTACTCAATAACTGTACGTGGATGtatattcatgaaaaataaattggtAAAACGTGCAA
>XM_043236958.1
GCGACCCGCGTTACGTGGTGACGCCAGATGTATATGAGCGCACGCGGCGGGATCTCTTTCCCTTTTAGCGCCATCAGAGCGGGAGTCTCGCGCTGTTCACTGCGCAGCAGCACCGCCTCAGACAGACCTCTGCACATCGGGCTCTCGaAAACAAAACGGTGAAACAACATGGCAGATCTTGACAATAAAGACCAGACTGAAATGGACCCAGCAGATATGGAGGATGTTGAagaggtggaggaggaagaAACTGGGGAAGACAACAGCAAAGCGCGTCAGCTGACGATGCAGATGATGCAGAACCCTCAGATTCTTGCGGCGCTGCAGGAGAGGTTGGATGGGCTCGTGGGATCTCCCTCAGGGTACATGGAGAGCTTACCGAAGGTGGTGAAGAGACGCGTTAATGCCCTCAAGAACCTCCAGGTGAAGTGCGCTCACATCGAAGCAAAGTTTTACGAAGAAGTGCACGAACTGGAGCGAAAATACGCCGCTTTGTATCAGCCTCTCTTCGACAAGCGGAGTGATATCGTGAGAGCAGCGTACGAACCCACAGATGAGGAGTGTGAGTGGAAAcaagatgaagaggaagagctgacaGAGGAAATGAAGGAAAAGGCCAAagtggaggaggagaagaaagacGAGGAGAAGGAAGACCCTAAAGGGATCCCAGAATTCTGGCTCACGGTTTTCAAGAATGTCGACCTTCTCAGCGAAATGTTGCAGGAGCATGATGAACCAATCCTAAAGCACTTACAAGACATTAAAGTAAAATTCTCAGATGCAGGCCAGCCCATGAGTTTCACATTAGAGTTCCACTTCGAACCCAACGATTTCTTCACAAACACAGTCCTGACAAAGACCTACAAAATGAGGTCCGAGCCGGACGAGTCGGACCCCTTCTCTTTCGACGGGCCAGAGATCATGGGCTGCACAGGgtgCACGATCGACTGGGTTAAGGGCAAGAACGTCACGTTGAAAACCATtaagaagaaacagaaacataAGGGACGTGGCACAGTGAGGACGGTCACCAAGACGGTCCCCAATGATTCCTTCTTCAACTTCTTCTCTCCACCTGAAGTTCCAGAAAGCGGTGAACTGGACGAGGACTCGGAGGCCGTGTTAGCCGCAGACTTTGAGATCGGTCACTTCATCCGCGAGCGGATCGTGCCCAGGGCAGTGCTGTACTTCACCGGCGAGGCCATCGAAGACGACGACGATGACTACGACGAGGAGGGAGAGGAAGCGGATGATGagGAGGGTGAAGAGGAGGCCGACGAGGAGAACGATCCAGACTACGAGCCCAAGAAGGACGCCAACCCTCCAGAGGAGTGCAAGCAGCAGTGATGACGATCTCCTTCAGGATCCCCTACACTGTAACGGCTTCAAACAAACATAGTTACTTACCGCCTtacaatgttttgtatttttcttggtagaaataattgaaaaattaaataaaagggtTTCGAGATTTTTGTTACGAAAAAAAAAGacgatattaaaaaaaaaaaccaacaaaaaaccAACGACCACCACCACACACAACTCCTCTATGGAAAGCCGCGGCTCATGACGCATAGTGTTTCACTAGGACCGGTTTCTttcgtttttttccctcttcctCTGTATAAATAGTTAGAATGCAGAAAATCCCTCGAAGCATGACACTCGTTTCTTCACCGCTAAACTAGTTGGGTTCTCGTGAAGTCTTTTGTATTGCTCTTAGACAACAGCTGTGGAAAGACGCTCCGGTTTACGGCTAACATTCCTCCACGGCGTTGGCTGTTTTGGGTTTGGAGGCTCGGTGGAGACTGAAGCACATTCCACATCCGTTCGGTCGGCGCTCTGCTGCATGACTCCTTTCTTTTCTATGAGCACTTTGTATTTTCGTCATGTATCCGTagcgttttattattattatattattatttcccCCTTCAATTCGACCGACGCTTGCGTTTCGACTGGCTTGCCGTTCTTCAGGAGGGTTCTCTGCGGAATGCACTTACGACGACGCGAGCGACCTCATTGGACGATTAGGACGAGAGCGTCTGATTGGAGGAGCCGGTTTAACCggtctctgattggctgctttcTGAGCTTGGCCCTGAGTGATGATTGTGGTGAAACGCCACCTCTGTTTGGCAGGCCTATCActgtgaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcagaggaaGGTCGTCTTCATCTCCTCTCACTCGTAGCGCAGCCCAGCAGGTCTGAAGCAGATAGAGCAATATTTTCACCCGGAAAGCCCCTCCGCCGCCGCAGTATCCCGTGTCTCGTGGCCCAGCTCCGTCCGGGTCACcggttagttagttagttgtGTCTGGTGAGCAGTTGAAGCAGCAGGGGTCTTTCTGGTTCCCCTCAGCAGCTGTTGTCAAAGCAAAATGCCATGCTACAAAATACTAATGTACTCAATAACTGTACGTGGATGtatattcatgaaaaataaattggtAAAACGTGCAA
>XM_043236959.1
CGCGACCCGCGTTACGTGGTGACGCCAGATGTATATGAGCGCACGCGGCGGGATCTCTTTCCCTTTTAGCGCCATCAGAGCGGGAGTCTCGCGCTGTTCACTGCGCAGCAGCACCGCCTCAGACAGACCTCTGCACATCGGGCTCTCGaAAACAAAACGGTGAAACAACATGGCAGATCTTGACAATAAAGACCAGACTGAAATGGACCCAGCAGATATGGAGGATGTTGAagaggtggaggaggaagaAACTGGGGAAGACAACAGCAAAGCGCGTCAGCTGACGATGCAGATGATGCAGAACCCTCAGATTCTTGCGGCGCTGCAGGAGAGGTTGGATGGGCTCGTGGGATCTCCCTCAGGGTACATGGAGAGCTTACCGAAGGTGGTGAAGAGACGCGTTAATGCCCTCAAGAACCTCCAGGTGAAGTGCGCTCACATCGAAGCAAAGTTTTACGAAGAAGTGCACGAACTGGAGCGAAAATACGCCGCTTTGTATCAGCCTCTCTTCGACAAGCGGAGTGATATCGTGAGAGCAGCGTACGAACCCACAGATGAGGAGTGTGAGTGGAAAcaagatgaagaggaagagctgacagtAAGTAAGCAGGAGGAAATGAAGGAAAAGGCCAAagtggaggaggagaagaaagacGAGGAGAAGGAAGACCCTAAAGGGATCCCAGAATTCTGGCTCACGGTTTTCAAGAATGTCGACCTTCTCAGCGAAATGTTGCAGGAGCATGATGAACCAATCCTAAAGCACTTACAAGACATTAAAGTAAAATTCTCAGATGCAGGCCAGCCCATGAGTTTCACATTAGAGTTCCACTTCGAACCCAACGATTTCTTCACAAACACAGTCCTGACAAAGACCTACAAAATGAGGTCCGAGCCGGACGAGTCGGACCCCTTCTCTTTCGACGGGCCAGAGATCATGGGCTGCACAGGgtgCACGATCGACTGGGTTAAGGGCAAGAACGTCACGTTGAAAACCATtaagaagaaacagaaacataAGGGACGTGGCACAGTGAGGACGGTCACCAAGACGGTCCCCAATGATTCCTTCTTCAACTTCTTCTCTCCACCTGAAGTTCCAGAAAGCGGTGAACTGGACGAGGACTCGGAGGCCGTGTTAGCCGCAGACTTTGAGATCGGTCACTTCATCCGCGAGCGGATCGTGCCCAGGGCAGTGCTGTACTTCACCGGCGAGGCCATCGAAGACGACGACGATGACTACGACGAGGAGGGAGAGGAAGCGGATGATGagGAGGGTGAAGAGGAGGCCGACGAGGAGAACGATCCAGACTACGAGCCCAAGGTATAAGTGATGTCTGTAGTAACCCTGCCCTGAAGGACGCCAACCCTCCAGAGGAGTGCAAGCAGCAGTGATGACGATCTCCTTCAGGATCCCCTACACTGTAACGGCTTCAAACAAACATAGTTACTTACCGCCTtacaatgttttgtatttttcttggtagaaataattgaaaaattaaataaaagggtTTCGAGATTTTTGTTACGAAAAAAAAAGacgatattaaaaaaaaaaaccaacaaaaaaccAACGACCACCACCACACACAACTCCTCTATGGAAAGCCGCGGCTCATGACGCATAGTGTTTCACTAGGACCGGTTTCTttcgtttttttccctcttcctCTGTATAAATAGTTAGAATGCAGAAAATCCCTCGAAGCATGACACTCGTTTCTTCACCGCTAAACTAGTTGGGTTCTCGTGAAGTCTTTTGTATTGCTCTTAGACAACAGCTGTGGAAAGACGCTCCGGTTTACGGCTAACATTCCTCCACGGCGTTGGCTGTTTTGGGTTTGGAGGCTCGGTGGAGACTGAAGCACATTCCACATCCGTTCGGTCGGCGCTCTGCTGCATGACTCCTTTCTTTTCTATGAGCACTTTGTATTTTCGTCATGTATCCGTagcgttttattattattatattattatttcccCCTTCAATTCGACCGACGCTTGCGTTTCGACTGGCTTGCCGTTCTTCAGGAGGGTTCTCTGCGGAATGCACTTACGACGACGCGAGCGACCTCATTGGACGATTAGGACGAGAGCGTCTGATTGGAGGAGCCGGTTTAACCggtctctgattggctgctttcTGAGCTTGGCCCTGAGTGATGATTGTGGTGAAACGCCACCTCTGTTTGGCAGGCCTATCActgtgaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcagaggaaGGTCGTCTTCATCTCCTCTCACTCGTAGCGCAGCCCAGCAGGTCTGAAGCAGATAGAGCAATATTTTCACCCGGAAAGCCCCTCCGCCGCCGCAGTATCCCGTGTCTCGTGGCCCAGCTCCGTCCGGGTCACcggttagttagttagttgtGTCTGGTGAGCAGTTGAAGCAGCAGGGGTCTTTCTGGTTCCCCTCAGCAGCTGTTGTCAAAGCAAAATGCCATGCTACAAAATACTAATGTACTCAATAACTGTACGTGGATGtatattcatgaaaaataaattggtAAAACGTGCAA

Function

symbol description
nap1l1 Predicted to enable chromatin binding activity and histone binding activity. Acts upstream of or within response to yeast. Predicted to be active in chromatin and nucleus. Is expressed in several structures, including immature eye; nervous system; neural tube; pharyngeal arch; and pronephros. Human ortholog(s) of this gene implicated in pancreatic cancer. Orthologous to several human genes including NAP1L1 (nucleosome assembly protein 1 like 1).

NR:

description
PREDICTED: nucleosome assembly protein 1-like 1 isoform X3

GO:

id name namespace
GO:0006334 nucleosome assembly biological_process
GO:0001878 response to yeast biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K11279 NAP1L1, NRP; nucleosome assembly protein 1-like 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236957.1 False 2532 mRNA 0.50 15 253266 267764
XM_043236958.1 False 2520 mRNA 0.50 15 253266 267764
XM_043236959.1 True 2565 mRNA 0.50 16 253266 267765

Neighbor

gene id symbol gene type direction distance location
phlda1 phlda1,LOC107708012,LOC107658781,LOC107656271,LOC107729151 coding downstream 845 250141 ~ 252421 (-)
krr1 krr1 coding downstream 47902 199811 ~ 205364 (-)
ccdc107 ccdc107,si:ch73-278m9.1,LOC107656458,LOC107729159,LOC107555866 coding downstream 68836 177273 ~ 184430 (-)
kcnc2 kcnc2,LOC107555885 coding downstream 81932 136003 ~ 171334 (-)
cpsf6 cpsf6,LOC107729149,LOC108279496,LOC107555887,LOC107708007 coding downstream 166656 75381 ~ 86610 (-)
csrp2 csrp2,LOC107708016,LOC107658959,LOC107656449 coding upstream 92402 360167 ~ 369423 (-)
e2f7 e2f7,LOC107707966,LOC107658780,LOC107656240,LOC107576735,LOC107584022 coding upstream 104105 371870 ~ 383326 (-)
cog5 cog5,LOC107583928,LOC107658957,LOC107656447,LOC107590548,LOC107729135,LOC106609192 coding upstream 115714 383479 ~ 449062 (-)
pde3a pde3a,LOC107590531,LOC107656239 coding upstream 232839 500604 ~ 580345 (-)
aebp2 aebp2,LOC107708024,LOC107658952 coding upstream 361300 629065 ~ 640725 (-)
G24724 LOC107555883,LOC107708011,LOC107658963 non-coding downstream 40020 212605 ~ 213246 (-)
G24712 NA non-coding downstream 44446 205893 ~ 208820 (-)
G24713 NA non-coding downstream 59107 191396 ~ 194159 (-)
G24792 NA non-coding upstream 337118 604883 ~ 605114 (-)
G24795 NA non-coding upstream 344626 612391 ~ 612843 (-)
G24796 NA non-coding upstream 345362 613127 ~ 613653 (-)
G24799 NA non-coding upstream 352412 620177 ~ 620588 (-)
G24802 NA non-coding upstream 355564 623329 ~ 624257 (-)
G24708 NA other downstream 62024 186460 ~ 191242 (-)
si:dkey-97m3.1 NA other downstream 179585 47610 ~ 73681 (-)
LOC122343420 wasla,LOC107753630,LOC107598884,LOC107659464,LOC107725914,LOC107658745,LOC107656407,LOC107698525,LOC107752346,LOC107575727 other downstream 219339 19991 ~ 33927 (-)
G24689 asb15b,LOC107726003,LOC107658939,LOC107583946,LOC107656400,LOC107711503 other downstream 242165 10833 ~ 11101 (-)
osbpl8 osbpl8,LOC107555879,LOC107656451 other upstream 12233 279998 ~ 341953 (-)
slco1c1 slco1c1,LOC107708018,LOC107583931,LOC107658953,LOC107729145,LOC107656392,LOC107590530,LOC108435080 other upstream 138877 406642 ~ 496868 (-)
pik3cg pik3cg,LOC107658948,LOC107656384,LOC107583938,LOC107705338,LOC107590535,LOC107584052 other upstream 596919 864684 ~ 933108 (-)
G24875 NA other upstream 801395 1069160 ~ 1070096 (-)
ptprz1b ptprz1,ptprz1b,LOC107725913,LOC107656236,LOC107658935,LOC107581028 other upstream 1021549 1289314 ~ 1323397 (-)

Expression


Co-expression Network