fgd4b (LOC107658950,LOC107705337,LOC107656390,LOC107590534,LOC107584024)


Basic Information

Item Value
gene id fgd4b
gene name LOC107658950,LOC107705337,LOC107656390,LOC107590534,LOC107584024
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 890697 ~ 908324 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236970.1
CGCGGATTAAAAGCGACTGAAGCTTTGAAGAGATGTTTGAGAAGGTGCGGAGGAGCGCGTATGATCTGCAGGAGCTCAGGAGAAGATCTGCACCGAGGGAAGAGGAGAAGGTCAGACGGAGATCAGTTCCCGgaGATGCTGCATGCGGTGGCCAGCGTGACGTTACGGACCAGAGCTTACTGAGTAACAGGAGCTCAGTGTTGAGAAGGTCAGCGGTCTACATCGTCTCAATGCCTCCTCCTCCAGTTCTTCCGAAACCAAAATTCCAGTGTCCAGAGAAGATTTCAGCTGGAAACATCATGGACGAGGACGAGGCACTGACAAACATAACCAGAGGAAGAACCACAGTGATCTCAAAACAGCACAGAAACATTCACAAGAGCGTCCCCGTCGCTTCTTCATCAGAGCGCCTCGCCAAAGCCCCCGTCTGCACTCAGCCATCCTCGCAGGACTCCGGCTGGCACGTCTGGTCCGGCTGGTGGTCagaagaggtcaaaggtcacgctGAGTTTGGAGAGCAAGAGACGGGCGCCGAACGTCTCCTGGCTCCCTCAGAAGACGGCAGTGAAAGAGCTCTACAGGACCACGCGGACGCCGCTCGGGAGGACGTCCTAAATGAAGAGTCGCAGAACATGGAGAAAGATGAAGACAAACAAGAGCAGATCAAAGAGCTCAAGCTTTATAAGATAGCCAATGAGCTTCTGCAGACGGAGAGAGCGTATGTGACCCGGCTGCATTTGCTGGACCAGGTGTTCTGCGCTAAACTCACAGAGGAGGCTGGGAAGGGGACGTTTCCCGTCGAGGTGGTGAAGGGCATCTTCTCTAACGTGGGATCCATCTACGCCTTCCACAGCCAGTTCCTGCTGCCGGATCTGGAGACGCGGATGAGCCAGTGGGCCTCCACGCCCCGCATCGGGGACATCCTAGCTCAGCTCGCGCCCTTTCTCAGGATGTACGCCGAGTACGTCAAGAACTTCGACAGCGCCATGGACCTGCTCAAACAGTGGACGGAGCGATCGGCCCAGTTTAACACCATCATCCAGGacatacagAGTCAGGAGGTGTGTGGGAATCTGAGCCTGCAGCATCACATGCTGGAGCCGGTGCAGCGGGTTCCTCGCTACGAGATGCTGCTCAAAGACTACCTGAAGAAACTCCCGGAGGACGACCCCGACCGCAGCCAGGCTGAGAAGTCACTGAACATCATCTCGATGGCTGCCATACACTCCAACACGGCCATCCGCAAGATGGAGAACCTGAAGAAGCTCATGGAGATCTATGAGATGCTGGGAGGTGAGGAGGACATCGTTAACCCGTCCAACGAGCTCATTAAAGAAGGACAAATCTTAAAGCTGGCCGCCAGAAACACGTCGTCCATGGAGAGATACCTTTTTCTGtTTAACAACATGCTGTTGTACTGCGTGCCCAAGTTCAGTCTGGTGGGCCAGCGGTTCACTGTGCGCACACGGGTCGGGGTCCAGGGCATGAAGGTGCTCGAGACCTCTAATGAAGACTATCCTCACACCTTCCAGGTGTCGGGTAAGGAGCGAACGCTGGAGCTGCAGGCCAGCTCACAGCAAGACAGAGAGGACTGGATCAAGGCGTTCCAGCAGACCATTGAAATCTTTCAGCAGAAGAACGAAACATTCAAATCAGCCTCTAAAGAAGTGGCGGATGAGGTTTCTAAAGAGGAGCTGGGGAAGAGAGCCCCGCGCTGGATTCGGGACAATGAAGTGACCATGTGCATGAAATGCAAGGAGCCCTTCAACCCTCTGACCCGCAGGAGACATCACTGCAGGGCATGCGGATATgttgtgtgttataaatgttCGGACTACAAGGCATCGCTGAGGTACGACAGCAACAAATTAAACAAGGTTTGTAAAGACTGTTACTTCATTCTGACTGGAAGAGTGGACTCTGAGGAGCCGGTCAGCGGGAAGAAAAGGGGAATTCTTGAGATTGAAGCAGCTCAGGTCTCAGGAAACAGTTTTCTTTGTGGCTTTCTGCAGTACAGTACAGACCGAACAAAACCGTGTCAAAGGGTCTGGTGTGTAATTCCCCAGCACGACGCGCTCGTTCTTTACCTCTACGGCGCTCCACAGGATGTCAAAGCCCAGTGTACCATACCGCTTCTGGGTTACCAGGTTGAGGACGTCCAGCGCTCTGTGGATCATCCTCCCACCAGCTTCCGTCTGTGCCAGTCCAAATCTGTCCACTGCTTCACTGCCGACACGGAGGAAATGAAACTGCGCTGGCTAAAAGTGATCCGCAAAGCTGTGATCGGTGAGACGCCCGAATGCCAGACGCCGGTCGATGACCTCGCCAACGGTTGCCATGAAGGCACGCCTGATGGCACCTTAAAAGACAAGGCAGTTTTCTAGCTTTTGCATTATGCGTGTAACTCGGCGGAATAGAAATTGTTCATTAGGATGTGAAACCTTCCAGAACAGGTTGGATTTATTTGGGAGCGTATAAGTAGATATgcctttttaatgtattataatgtcAACCACAATcagacagtaaaaacattcagtgtgtgattatttaaatcaataactCAGTTTACGAAAGTTTGTTCGCAGACCAATCTCAGCAAAGTCTGAATAATGCTTTGCGATGTATTAGCCTTTCTCTTTGTGacgtttttaaatttgtatatgCTGTTTGTCGTTTTCAATGTCTCTAAGATTCATGCACTTTATTGCTTTTTGTAAAGTAGgccattaacattaaaatgaatgaataagaaCTGAA
>XM_043236971.1
CTGGATGAGGCTCGACAGACTCCCGGCGTCAGCAATTTCTTGCACGATAAAtgtcacacacatgcattcatgcagaaaaaaaagggaaatgcaGTGAATAGAGGAGGCGTCATGTGCCCCGTCAACATACAGGATTCAGGAGAGCAGCGTGTGGCCGGGTGATCAGgaGATGCTGCATGCGGTGGCCAGCGTGACGTTACGGACCAGAGCTTACTGAGTAACAGGAGCTCAGTGTTGAGAAGGTCAGCGGTCTACATCGTCTCAATGCCTCCTCCTCCAGTTCTTCCGAAACCAAAATTCCAGTGTCCAGAGAAGATTTCAGCTGGAAACATCATGGACGAGGACGAGGCACTGACAAACATAACCAGAGGAAGAACCACAGTGATCTCAAAACAGCACAGAAACATTCACAAGAGCGTCCCCGTCGCTTCTTCATCAGAGCGCCTCGCCAAAGCCCCCGTCTGCACTCAGCCATCCTCGCAGGACTCCGGCTGGCACGTCTGGTCCGGCTGGTGGTCagaagaggtcaaaggtcacgctGAGTTTGGAGAGCAAGAGACGGGCGCCGAACGTCTCCTGGCTCCCTCAGAAGACGGCAGTGAAAGAGCTCTACAGGACCACGCGGACGCCGCTCGGGAGGACGTCCTAAATGAAGAGTCGCAGAACATGGAGAAAGATGAAGACAAACAAGAGCAGATCAAAGAGCTCAAGCTTTATAAGATAGCCAATGAGCTTCTGCAGACGGAGAGAGCGTATGTGACCCGGCTGCATTTGCTGGACCAGGTGTTCTGCGCTAAACTCACAGAGGAGGCTGGGAAGGGGACGTTTCCCGTCGAGGTGGTGAAGGGCATCTTCTCTAACGTGGGATCCATCTACGCCTTCCACAGCCAGTTCCTGCTGCCGGATCTGGAGACGCGGATGAGCCAGTGGGCCTCCACGCCCCGCATCGGGGACATCCTAGCTCAGCTCGCGCCCTTTCTCAGGATGTACGCCGAGTACGTCAAGAACTTCGACAGCGCCATGGACCTGCTCAAACAGTGGACGGAGCGATCGGCCCAGTTTAACACCATCATCCAGGacatacagAGTCAGGAGGTGTGTGGGAATCTGAGCCTGCAGCATCACATGCTGGAGCCGGTGCAGCGGGTTCCTCGCTACGAGATGCTGCTCAAAGACTACCTGAAGAAACTCCCGGAGGACGACCCCGACCGCAGCCAGGCTGAGAAGTCACTGAACATCATCTCGATGGCTGCCATACACTCCAACACGGCCATCCGCAAGATGGAGAACCTGAAGAAGCTCATGGAGATCTATGAGATGCTGGGAGGTGAGGAGGACATCGTTAACCCGTCCAACGAGCTCATTAAAGAAGGACAAATCTTAAAGCTGGCCGCCAGAAACACGTCGTCCATGGAGAGATACCTTTTTCTGtTTAACAACATGCTGTTGTACTGCGTGCCCAAGTTCAGTCTGGTGGGCCAGCGGTTCACTGTGCGCACACGGGTCGGGGTCCAGGGCATGAAGGTGCTCGAGACCTCTAATGAAGACTATCCTCACACCTTCCAGGTGTCGGGTAAGGAGCGAACGCTGGAGCTGCAGGCCAGCTCACAGCAAGACAGAGAGGACTGGATCAAGGCGTTCCAGCAGACCATTGAAATCTTTCAGCAGAAGAACGAAACATTCAAATCAGCCTCTAAAGAAGTGGCGGATGAGGTTTCTAAAGAGGAGCTGGGGAAGAGAGCCCCGCGCTGGATTCGGGACAATGAAGTGACCATGTGCATGAAATGCAAGGAGCCCTTCAACCCTCTGACCCGCAGGAGACATCACTGCAGGGCATGCGGATATgttgtgtgttataaatgttCGGACTACAAGGCATCGCTGAGGTACGACAGCAACAAATTAAACAAGGTTTGTAAAGACTGTTACTTCATTCTGACTGGAAGAGTGGACTCTGAGGAGCCGGTCAGCGGGAAGAAAAGGGGAATTCTTGAGATTGAAGCAGCTCAGGTCTCAGGAAACAGTTTTCTTTGTGGCTTTCTGCAGTACAGTACAGACCGAACAAAACCGTGTCAAAGGGTCTGGTGTGTAATTCCCCAGCACGACGCGCTCGTTCTTTACCTCTACGGCGCTCCACAGGATGTCAAAGCCCAGTGTACCATACCGCTTCTGGGTTACCAGGTTGAGGACGTCCAGCGCTCTGTGGATCATCCTCCCACCAGCTTCCGTCTGTGCCAGTCCAAATCTGTCCACTGCTTCACTGCCGACACGGAGGAAATGAAACTGCGCTGGCTAAAAGTGATCCGCAAAGCTGTGATCGGTGAGACGCCCGAATGCCAGACGCCGGTCGATGACCTCGCCAACGGTTGCCATGAAGGCACGCCTGATGGCACCTTAAAAGACAAGGCAGTTTTCTAGCTTTTGCATTATGCGTGTAACTCGGCGGAATAGAAATTGTTCATTAGGATGTGAAACCTTCCAGAACAGGTTGGATTTATTTGGGAGCGTATAAGTAGATATgcctttttaatgtattataatgtcAACCACAATcagacagtaaaaacattcagtgtgtgattatttaaatcaataactCAGTTTACGAAAGTTTGTTCGCAGACCAATCTCAGCAAAGTCTGAATAATGCTTTGCGATGTATTAGCCTTTCTCTTTGTGacgtttttaaatttgtatatgCTGTTTGTCGTTTTCAATGTCTCTAAGATTCATGCACTTTATTGCTTTTTGTAAAGTAGgccattaacattaaaatgaatgaataagaaCTGAA

Function

NR:

description
PREDICTED: FYVE, RhoGEF and PH domain-containing protein 4-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236970.1 False 2760 mRNA 0.51 17 890697 908324
XM_043236971.1 True 2794 mRNA 0.51 17 891964 908324

Neighbor

gene id symbol gene type direction distance location
LOC122342829 LOC107705336,LOC107583937,LOC107656238 coding upstream 1938 867196 ~ 888759 (+)
LOC122342832 NA coding upstream 27146 860596 ~ 863551 (+)
zdhhc17 zdhhc17,LOC107708015,LOC107658960,LOC107656450 coding upstream 529775 343592 ~ 360922 (+)
LOC122343357 LOC107658963,LOC107708011,LOC107555883 coding upstream 677538 205505 ~ 213159 (+)
glipr1a NA coding upstream 691161 195092 ~ 199536 (+)
nampt1 nampt,nampta,LOC107658946,LOC107705339,LOC107656408,LOC107718548,LOC102790888 coding downstream 9258 917582 ~ 931678 (+)
sypl1 sypl1,LOC107590538,LOC107658778,LOC107583939,LOC107656429,LOC107718552 coding downstream 25722 934046 ~ 937823 (+)
atxn7l1 LOC107658944,LOC107705340,LOC107583941,LOC107656393,LOC107590536,LOC107718553 coding downstream 30836 939160 ~ 957350 (+)
znf800b LOC107658945,LOC107583943,LOC107711512,LOC107590539,LOC107656405,LOC107736565,LOC107705332 coding downstream 50010 958334 ~ 969359 (+)
grm8a grm8a,LOC107584025,LOC107658943,LOC107711511,LOC107656388,LOC107725917 coding downstream 61811 970135 ~ 1111519 (+)
G24768 LOC107718544,LOC107658747,LOC107590532 non-coding upstream 239104 649509 ~ 651593 (+)
G24758 NA non-coding upstream 265472 623251 ~ 625225 (+)
G24754 NA non-coding upstream 271001 619477 ~ 619696 (+)
G24751 NA non-coding upstream 274841 615600 ~ 615856 (+)
G24746 NA non-coding upstream 283183 607287 ~ 607514 (+)
LOC122342413 NA non-coding downstream 204571 1112895 ~ 1127380 (+)
G24925 NA non-coding downstream 378288 1286612 ~ 1287073 (+)
G24968 LOC107583957,LOC107656385,LOC107579307,LOC107711491 non-coding downstream 648068 1556392 ~ 1557778 (+)
G25071 NA non-coding downstream 780654 1688978 ~ 1693389 (+)
G25030 NA non-coding downstream 880307 1788631 ~ 1789276 (+)
G24771 plekha5,LOC107584023,LOC107658747 other upstream 225167 654092 ~ 665530 (+)
gpr22a gpr22a,LOC107658958,LOC107583929,LOC107729153,LOC107708019,LOC107590528,LOC107656448 other upstream 451345 434343 ~ 439352 (+)
G24632 LOC107584022 other upstream 516615 373527 ~ 374082 (+)
G24609 NA other upstream 595628 293235 ~ 295069 (+)
cmah cmah,LOC107555874,LOC107729160,LOC107656456,LOC107590555 other upstream 696514 184716 ~ 194183 (+)
LOC122342481 LOC107584054,LOC107658775,LOC107725972,LOC107711476,LOC107581286,LOC107656415,LOC107725915 other downstream 337254 1245578 ~ 1249169 (+)
ndufa5 ndufa5,LOC107725958,LOC107658774,LOC107579922 other downstream 379973 1288297 ~ 1291224 (+)
LOC122342419 coa6,LOC107726010,LOC107583951,LOC107658937 other downstream 421128 1329452 ~ 1331843 (+)
LOC122343488 NA other downstream 762188 1670512 ~ 1672959 (+)
LOC122342451 NA other downstream 875913 1784237 ~ 1788096 (+)

Expression


Co-expression Network