LOC122342856 (LOC107689257,LOC107726829)


Basic Information

Item Value
gene id LOC122342856
gene name LOC107689257,LOC107726829
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13523950 ~ 13530743 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236995.1
ATGTTGCCACATGTTACTTATCAAGTCACATTGCGTTTTGCGTTTGACCATGTGGTTGGTGTAACCAACTTAATGGTGTTCTGCCAGCAAGGCACTATACATGTGGGCAATGCACCAGCGATGTTCCTCCCTGTTCTCACCTCAGGGTCTGCGAGCACTCAGATTAGGACATGTCCTTTGCTCTCTGTTCAGCCCAGAAGAGGACTGGTGGATGAGAAATTTCAGTTCGCAGTAACAAATTTAAAGCCAAATCAAAAAGTGACACTACACTCTCTGCATCAGTCAGATGACAGGGATTTCTGGGAGGCATTTGGACACTATGTCAGTGATGAACAAGGATCAGTGACAGGGTTCAAAGATGAAAGTTTGGGAGGCACTTATGAAGGCATAGAGCCATTGGGGTTAGTGTGGAGCATGAGACCCATACCAGGAAGTCGACATGGACTCAGGTTACGTAAGAAGGACATTTTCAGACCAATGGAAGTTCACATTTCAGTATACAGTGGGCATCTATCTCAAGGCTTTAGCCAGCAAGCACCCTTGGCAACCAGTGTCACTGAGCGCTGGTACTTCGCTCCAGGTGTGAAGAGGGTGAACATCAGGGAGAATAACGTACGAGGAACATTATTCCTACCTCCAGGCCCTGGGCCATTTCCAGGTGTGTTGGACCTTTGGGGAGCTAGTGAAAGTTTGGTGGAGTACCGTTCTTCTCTGCTTGCATCTCACGGCTTCGCATCTATGGCGCTTGAGTACCTCGCTCCAAACAATATGAAGACGGAAGACACTGACGCTTCGTACTTTGAGAAAGCCTACCAGATCCTAGAGAATCATCCAATGGTACAGAAAGACAATTTGGCTGTTCTTGGGCTGTGTTTGGGAAGCGCCATCACACTCAATATGGTGTCCTACTCCAAAGTCGTTAAGCCCCAGTGTTGTGTGTGCATTAGCGGAAGTCATCTGATGCCTCTTGATAACTCCCTCTCTGAACTCTTTGAGGAGCTAAAAAAACATGCAGATAAGCAACGTGTGAATGAGGACAACCAGGTCATCTACAAATATGTCATCTCAACGCTTCACTGTCAAAGTATCAAAGTTGATGTTGGGAGAATAAAGTGTCCTCTTCTGCTGGTGAATGGTGATGATGATCAGGCAGTTCCTGTATTGGAGTCCGCTGAAGATATGGAGATGATGATGGAGAAAGCAGGAAATCGACACTTGCTGGAAGTCCTGACGTATCCCGACGCGGGTCATCTGATCGAACCTCCGTACTCTCCTCACTTCAGAGCAACTAACTTCAAACTGCAGCGGACGAAGGAGAGAGTTGTCATGCTGTGGGGTGGAAAAACCAAACCGCACGCGCACGCTCAAGAGGACTCATGGGAGAAGATACTGTCATTTCTGTGGCAGCACCTGTCAGCGCCAGTGACTTCATCCATTTAAAAGTAATCATCTG

Function

NR:

description
PREDICTED: bile acid-CoA:amino acid N-acyltransferase-like

GO:

id name namespace
GO:0006637 acyl-CoA metabolic process biological_process
GO:0016790 thiolester hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236995.1 True 1453 mRNA 0.47 12 13523950 13530743

Neighbor

gene id symbol gene type direction distance location
tnni1d tnni1d,LOC107597014,LOC108280151,LOC103374597 coding upstream 22426 13497740 ~ 13501524 (+)
scyl2 scyl2,si:ch211-244b2.1,LOC107755162 coding upstream 65055 13446957 ~ 13458895 (+)
depdc4 si:ch211-265o23.1,LOC107755163,LOC107689232,LOC107597010 coding upstream 77129 13440636 ~ 13446821 (+)
metap2a metap2a,LOC107689230,LOC107597011,LOC107755160,LOC106576295,LOC100194705 coding upstream 91263 13423238 ~ 13432687 (+)
lamb1b lamb1b,LOC107755155,LOC107689224 coding upstream 178889 13326365 ~ 13345061 (+)
iqsec3a iqsec3,iqsec3a,LOC107689235,LOC107748472,LOC107689713,LOC107584743 coding downstream 4381 13535124 ~ 13632058 (+)
LOC122343497 parp11,LOC107726831,LOC107689238,LOC107597042,LOC107748476,LOC107584716,LOC108280019 coding downstream 134916 13665659 ~ 13669633 (+)
LOC122343498 LOC107726847,LOC107689239,LOC107597006 coding downstream 139030 13669773 ~ 13673709 (+)
LOC122343279 LOC107689243,LOC107689721,LOC107716183,LOC106575984,LOC108427068 coding downstream 258901 13789644 ~ 13827064 (+)
LOC122343278 LOC107689245,LOC107689723,LOC107566844,LOC105891163,LOC106575983,LOC106609116 coding downstream 301389 13832132 ~ 13842547 (+)
LOC122343375 NA non-coding upstream 3493 13516630 ~ 13520457 (+)
G28312 NA non-coding upstream 10357 13510856 ~ 13513593 (+)
G28298 NA non-coding upstream 53815 13467404 ~ 13470135 (+)
G28295 NA non-coding upstream 83928 13437936 ~ 13440022 (+)
G28248 NA non-coding upstream 149984 13247769 ~ 13373966 (+)
G28446 NA non-coding downstream 227224 13757967 ~ 13760112 (+)
G28486 NA non-coding downstream 297282 13828025 ~ 13828537 (+)
G28503 NA non-coding downstream 461280 13992023 ~ 13992831 (+)
G28667 NA non-coding downstream 1277854 14808597 ~ 14809661 (+)
G28726 NA non-coding downstream 1303887 14834630 ~ 14854751 (+)
vezt vezt,LOC107689227,LOC107667718,LOC107597031,LOC107755144 other upstream 90344 13405929 ~ 13433606 (+)
G28252 si:dkey-183c16.7,LOC107689220,LOC107755152 other upstream 208266 13305669 ~ 13315684 (+)
kin kin,LOC102791470 other upstream 369592 13150736 ~ 13154358 (+)
gnai1 gnai1,LOC107590838,LOC100706147,LOC103382723,LOC106609493 other upstream 1708645 11796982 ~ 11815305 (+)
ndufb2 ndufb2,LOC107755897,LOC107578274,LOC107694192,LOC107590801,LOC107710676 other upstream 1832821 11689314 ~ 11691129 (+)
LOC122342701 im:7143923,cpne8,LOC101886030,LOC107566841,LOC108279828,LOC107689738,LOC108427072,LOC103365370,LOC107666208,LOC102193326,LOC102297242 other downstream 352151 13882894 ~ 13961098 (+)
trmu trmu other downstream 454774 13985517 ~ 13991772 (+)
tbc1d22a tbc1d22a,LOC107689730,LOC107710738 other downstream 646687 14177430 ~ 14294618 (+)
tafa5a fam19a5a,fam19a5,LOC107552289,LOC107689731,LOC107563619,LOC107721159,LOC106609108,LOC103356475 other downstream 869286 14400029 ~ 14482821 (+)
LOC122343376 LOC107699368,LOC107601007,LOC107733210,LOC105896948,LOC104933464 other downstream 1627012 15157755 ~ 15214432 (+)

Expression


Co-expression Network