cd36 (cd36,LOC107590984,LOC107680017,LOC107694198)


Basic Information

Item Value
gene id cd36
gene name cd36,LOC107590984,LOC107680017,LOC107694198
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 11785346 ~ 11792920 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236999.1
TGGCTTCTGAATGCCGTGCGTTACGCGCCCGCTCCCCGCCCAGCGGCGCGTTATCGCGCGCAGATAACTCCGTCTTAACAAGAGGGTCTCCGGGCGTGATGCGCAGCAATCCGGTCCCAAATCTCCTCCTCTGCAACCTTCGATCCCTGGAACTTACATAATTCCCAGGACGACCTCATGCTCGCACCTGACGCGCCGCCGGTCAGTGTTGGTCCAGGCTGCCGCTCGCCATCATGACCTGCTGCGATCTGAAATGCGGGCTCACCGCGGGGACCGTGCTGGGCGCCCTGATCGCCTTGCTGGGCGGGATCCTCATCCCCGTGGGCAACATGTTCATTGAAAACACCGTGCGCACGGAAACCGTGTTGGAGAACGGGACTTTAGCGTTCGACACCTGGACGTCTGTAGACACGGCGATATACAGACAGTTTTGGCTGTTTAACGTCCAGAACCCTGACGAGGTTTTGAGTCAAGGGGCCAAACCTGTGGTGGTGCAGAAAGGGCCCTACACATACAGAACACGTTATATCCCCAAAAGAAATATCACCTTCAACGACAACTACACTGTGTCCTTCGTGCTGCCGGCGGGAGCCATCTTTGAGCCAGGAATGTCAGTAGGCACAGAGGAGGACGTATTCACATCGATCAATCTAGCTGTAGCAGGCGTTTACAGCTTACTAGACCACGGTCTTGCGAACTTGCTCATCCAGCGCTCCAACTCCACACTTTTCCAGAACAGGACCGTTAGGGAATTGCTGTGGGGCTACAAAGACCCGATGCTGAGCAGCACGCTTGGAGTTTTTTATCCAtaCAACGACACCATCGACGGACCGTACACTGTATTCACAGGCAAAGATGACATTAAGAAGGTAGCCACCATTGAGCGCTGGCAAGGGGAACCATCGCTGAGTTACTGGAATGACCCTTATTGCAACAAGATAAACGGAACAGACGGTTCCTCCTTCCGTCCTTTCCTGGACAAGAAAGAACCCCTGTACTTCTTCTCATCCGATATCTGCAGGGCAATATCTGCCGTGTACGAGGAAACCGTTGACCTGAAGGGAATCGACGTGTACCGGTACATGCTGCCTCCTGAAGCTCTGGCCTCTCCAGCGGTCAACCCAGATAACCAGTGCTACTGTACGGACCCCGTGATCACCAGGAACTGCACTACGGCAGGACTTCTGGACCTCACGCCCTGTAGAGGGACCCCGGTATTCCTCTCTCTGCCCCACTTCCTCTATGGCAGCAATGATCTCCATCAAGGCGTGATCGGACTCAACCCAAATTTCGATGAGCACTCCATATTTCTGGACGTCGAACCGATTACAGGCTTCACTCTGAGATTTGCAAAAAGACTTCAGGTCAACATGCTGTACGGCCCGTCGGAAAGTATTGTaattttgaacaaaatcaaGGACTACACGGTTTTCCCTATTTTATGGGTAAACGAGACGGCGGTTCTGGACGACGAGACGGCCGACATGTTCAAGAAAGAGCTGATTTCTCGGATGGAGCTGCTGGAGGGGGTTCAGATCGGACTCATAGTGGCCGGCTTAGTCTTATTCGCCAGCTGTTTGATCGGATTGATCGTGGCGTGCACGAAACCGAGCAATAACAAACTTTCTCTGATCGTTAAATAAAGCGAGGGAGCTTTGCGTGttcgatttcttttttttttttgatggcgCACTTTGTGAGAATTGTATATTGTAATTGTTATCTGCGCTCGGAGTACCGCGattctatttatataatttataagctCTGCATTTTTGCGTCGCGAAATGATTTCCTTCTGTATTCGGCTTGATTATCGTATCAAGTTATACTTTTAAATGGTTATCGAGGGCAAAGGTTCTGCCATTTTGTGGTCGTActgtgattcatttaaatataaaatagttttgtatGTCGGCACAATTTCAGTAAAACGAAGAACTGTGAAACTTG

Function

symbol description
cd36 Predicted to enable low-density lipoprotein particle binding activity; low-density lipoprotein particle receptor activity; and scavenger receptor activity. Acts upstream of or within several processes, including defense response to bacterium; response to prostaglandin; and response to vitamin B3. Located in plasma membrane. Is expressed in several structures, including blastoderm; blastodisc; digestive system; pleuroperitoneal region; and taste bud. Human ortholog(s) of this gene implicated in several diseases, including blood platelet disease (multiple); hemolytic-uremic syndrome; osteoarthritis; pulmonary tuberculosis; and type 2 diabetes mellitus. Orthologous to human CD36 (CD36 molecule).

NR:

description
PREDICTED: platelet glycoprotein 4

GO:

id name namespace
GO:0034694 response to prostaglandin biological_process
GO:0033552 response to vitamin B3 biological_process
GO:0007155 cell adhesion biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K06259 CD36; CD36 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236999.1 True 1953 mRNA 0.50 12 11785346 11792920

Neighbor

gene id symbol gene type direction distance location
kdm7aa LOC107694190,LOC107590789,LOC107710674,LOC107590966,LOC107680036 coding downstream 74844 11691122 ~ 11710502 (-)
orc5 orc5 coding downstream 167857 11607310 ~ 11617489 (-)
golgb1 golgb1,LOC107694188,LOC107755883,LOC107590726,LOC107710669,LOC107590960 coding downstream 183324 11582762 ~ 11602022 (-)
hcls1 hcls1,LOC107755885,LOC107694186,LOC107710670,LOC107680042,LOC105023407,LOC103459100 coding downstream 203043 11575175 ~ 11582303 (-)
lin7a lin7a,LOC107755905,LOC107590687 coding downstream 409084 11338341 ~ 11376262 (-)
nup107 nup107,LOC107590859,LOC107710680,LOC107694200,LOC107680040 coding upstream 37837 11830757 ~ 11840052 (-)
LOC122343504 si:ch211-198g19.1,si:ch211-149p5.1,trhde,LOC107590972,LOC107556777,LOC107710683,LOC107556776 coding upstream 486721 12279641 ~ 12371170 (-)
LOC122343505 trhde,si:ch211-149p5.1,si:ch211-198g19.1,LOC107556776,LOC107666938,LOC107590972,LOC107710683,LOC107710667,LOC107669707 coding upstream 620866 12413786 ~ 12430886 (-)
usp6nl usp6nl,LOC107669711,LOC107710686,LOC107572286 coding upstream 699434 12492354 ~ 12536326 (-)
celf2 celf2,LOC106927059,LOC108233267,LOC101484207,LOC107092344 coding upstream 746137 12539057 ~ 12671471 (-)
G28029 NA non-coding downstream 96546 11685732 ~ 11688800 (-)
LOC122343274 NA non-coding downstream 136923 11618450 ~ 11648423 (-)
G27974 syt1a,LOC107590640,LOC107694178,LOC107734425 non-coding downstream 525863 11126502 ~ 11259483 (-)
LOC122342624 LOC107694146 non-coding downstream 852945 10930597 ~ 10932401 (-)
G27940 NA non-coding downstream 1065062 10714630 ~ 10720284 (-)
LOC122342677 NA non-coding upstream 1363 11794283 ~ 11820297 (-)
G28033 NA non-coding upstream 5646 11798566 ~ 11815305 (-)
G28090 NA non-coding upstream 204093 11997013 ~ 11997303 (-)
G28086 NA non-coding upstream 225689 12018609 ~ 12019001 (-)
G28117 NA non-coding upstream 355212 12148132 ~ 12155251 (-)
kmt2e kmt2e,LOC107590817,LOC107590964,LOC107710662 other downstream 101484 11653470 ~ 11683862 (-)
ppfia2 ppfia2,LOC107694182,LOC107755902,LOC107680027 other downstream 211580 11414720 ~ 11573766 (-)
dcp1b dcp1b,LOC107590561,LOC107738825,LOC107733007,LOC107589040,LOC107699046,LOC107694173 other downstream 1251803 10524531 ~ 10533543 (-)
cacna2d4a cacna2d4a,cacna2d4,LOC107694142,LOC107738821 other downstream 1263097 10484922 ~ 10522249 (-)
zgc:193726 NA other downstream 1421780 10355711 ~ 10363566 (-)
magi2a magi2a,LOC107680009,LOC107755877,LOC107591172,LOC107694149,LOC107590979 other upstream 49045 11841965 ~ 11996639 (-)
G28093 slc35e3,LOC107710682,LOC107556774,LOC107737854 other upstream 221711 12014631 ~ 12015767 (-)
cpm cpm,LOC107728505,LOC107710685,LOC107666948,LOC107669712 other upstream 672692 12465612 ~ 12489181 (-)
tmem110l tmem110l,LOC107597025,LOC107748459,LOC107675974,LOC107555827,LOC107666935 other upstream 1384041 13176961 ~ 13186890 (-)
tmcc3 tmcc3,LOC107689246,LOC107667715 other upstream 1524012 13316932 ~ 13361938 (-)

Expression


Co-expression Network