cald1a (cald1a,LOC107583995,LOC107725991,LOC107658884,LOC107656362,LOC107710121)


Basic Information

Item Value
gene id cald1a
gene name cald1a,LOC107583995,LOC107725991,LOC107658884,LOC107656362,LOC107710121
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 2042953 ~ 2088579 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237016.1
AACGGCTTCTAAAGGGCGGAGCTTCCCAAACTCAGAGTCCTGTTACTGAACGCTGGAGATTTTGGGAGTGAAGGAACAGCTCAAGTCATTTTCTCTTTGCAGGTTTCTTCGCACATCTAAAGGACGCACGCTTCGTTCGCCTCAACGCGCAGGGTCACGCTCTCAGAATTGAAGCATGGATGATGATTTCGAGCGGCGCAGGGAGCTCAGGAGACAGAAGCGGGAGGAGATGCGTCTGGAAGCCGAGAGGATGGCATATCGCCGgaatgaggaggatgaggaagaggcGGCTCGTGAGCGCAGACGAAGAGCGCGGCAGGAGAGAATGCGCAGCAAGGACAGCGAGGATGTGGCGTACCAACCCGAGACCCCCGAGCTCAACAACAGCCACAGCGTGACAGTGACAGAGAGCGTATCCACCTCAGTGGTGACTTCCAGCGGGACAGGCGAGGGGGACGATGAGGAGCAGGCCCTGCTGGAGCGCTTGGCCAAGAGAGAGGAGCGCAGGCAGAGGAGGATGAAGGAGGCGCTGGACAGACAGGAGGAGCCGGAGAGCACCAGAGGCCGGAGCTACGAGCCAGAGGAGGAGCACAACAGCAAGGAGGAGGTCAAAcaggcggaggaggaggaggaggaggtcgTCACCAGAGAGGAGGTGCTGGTGGAGGAAAAGCCCCGGAGGTCTTATTTCAGAGAACAGGAATCCGTTGAAGAAATATCTAAAATACCTGAGGAGGACGATAATGAGCAAGATGCTGTGCCTTCTTCTGAAGTACATGAGGTGCTTGTAAATGAAGACGTAGATGATTCCGCAGTTGTTTCGGAGGTGGAAAAGAGTGAGATAGAGGGATTGACAGAGAATGGAGTGGATGAGATGAGAGAGGCAGAAAACTTTGAGAAATATGAGGTTTCAGAAAATGACGAGTGTTTGATGGAAGATGAAGATGTGATGAGGAAGAATAAACAGCCCAATGGAGGAGTGTGCGAGGACAGCACTCCCAAACACAAGAAAGCTGAGAGAACTTTCAGCCGAGGCAGCTTGCGCTCTCCTGAGGCGCCGGAGGCAGACGAGGCAGACAGCGAGGATGCTCGCTTGGAAGCCGAGAGAAAGCTGGAGGAACTGAAGAGGAGAAGAGATGAGATGGAGAGCGAGGAGTTCGAGAGGATGAGGCAGAAACAGCAGGAGGCCgaggtggagctggaggagctgaagaggaagagggaggagaggaggaaggTGCTGGAAGAGGAGGAGCGGCGGAGGAAGCAGGAGGAGGCCGAGAGGAAAGCCAGAGAGGAGGAGGaaaagaggaggatgaaggagGAGATCGAGAAGAGAAGAGCAGAGGCGGCTGAGAAGAGGCAGAAAGTGGAGGATTCGGTGGACGGAGAAGCCAGGAAGCCCTTTAAGTGTGTCAGTCCCAGAGGATCCTCCCTGAAGATCGGTGAGAGGGCAGAATTTCTCAACAGATCAGCACAGAAGAGTTCTGTGAAGGCGTCTCACTCTCCTGTGGTGTCCAAGATTGATAACCGATTAGAGCAGTACACCAGCGCCGTGCAGGGCAACAGAGAGGTCAGATCTCCCAGATCAGCTGCCATAGATCTTCCCATGGTGACGGACGGTATTCGCAACATTAAGAGCATGTGGGAGAAGGGGAATGTCTTCAGCTCTGGTGGGAGCCCAGCGTCCACCAACAAGGATGCAGCTGGGATAAAGGTGGGCGTGGCTGGGCGCATCAACGATTGGTTGAACAAAACTCCAGAGATGGGCAAAATGGCAGGAGGAAGACCCGCGGACCTAAAACCAGGCGACGTGACCAGCAAGCGCAATCTATGGGAAAACAAAGGATCCTCTGCTACCAAGGTCACAAGCAGAGGAGAGACCAAATCCGTCACCAATGgaATGGGCCATTAACCCTTCAAAGACGCCAGAGGCAGGGACCAAGAGAATGCACaacattcctttttttaatcttttattaataccaaaaaaaaatacaagcattTTATACTGCCAGGAAGATCTATGTGAGTAGACACAgtataaaagagagaaaaattaaaaaatatatatattttatcactgTATTCACAGGTCACCGTCTTACACCATCATAACATAAACGCAATGCCTTTGCATGTAACTTCTGTTAAACTGAAATCAAGGCTGTGAAAACAAGCAAgtcatttgtttagtttatatataacaattaaataacagCAGCCAACTTCAAACATTATGAGATTCCTTGAAAAGGAGGACGAGGAGTTGCATTCCGAATCTGTCAAATCACTCATTTTAAACATGTTAGTTACCCTTCTCACCTGTTAATTTATAACTAAAGCAAAGCTTCACCTTGCATTTCATGCCTGTTCGCCAGTTCCAGACCGAATATGAGCACCGTAGTGTAGctgtattttgtactttttgtcgtaacgacacttttttttaataaaaattgtctTAATAATATATGTTAGCACATAGTGTAAGTTTTTGTaattaactatatattttactgCTTGATACAAAATGGTCTTTGCTTTTGCtctcaatattattttatatcaaagcAAATTTTAATTCAGAAGAAGTCCATTATAGTCACACTGATGGCATCATTACATTATCATTGGCTTTTTTACTCTTGGAAACACCGTTGTTTGTGACCATCTTTTTGTAAGTGTTAATAGTGGAATAATCGGTATTGGTTAAAAAACTTAAACTCGAAAGAAAGGGAACATGCACTTTTTGATttaagtgcccctattattattaaagcagtgtgagcttttaacgctccaaaagcagcacatAGTGGCAAacaatgaatttgcatttcCAATGTGAAAAGATCAAGTGACATCCAAATTTTGATGTCAAcgtgaaacggcttgggactcgttttaaaagcGACACATTTCAATGAATCAAAGTCAGCTCTTTCAGAgtcaataactttatacatagtgcactttcagattttgcaggatgttttcattcgctttgagctgtgttacacactgcatgaaagctcattttcaaaaaatccataataggggcactttaaatgtcatatttgatGAGTACATTTCGCAATTTTTGCATATAATGCAAGGCTTTGATTAATCCAGAAACATCCATTTAGAAGAACAAAATCAATTCATGTTTATTGTTCAAGTGTTATATTTTCTACTTTCTGTTGCGATCATTCATACTAAATGGTAACATGGATGTCATCGCCTTACAGTAGTGCTAGCCGTCATGTAAACGCGTATCATTTCTGACGTCTTTTGTCAGACAAAGAATATCCAGTTCTGCCGCCGTAGCTTATCGCTAATGTCTCTAAATGTGCAAAGTTCCTGTATTCTGCTTGTATTTTTTGacaatcaagttttttttactatttgtttCAACACTTATGTATTGTTTCAGAGTAACACTATGCAAGTCGCACCACCTTTAATTGCAATTACCTTGTTACAAATATGACCGTTTTTGTAGCCAATAGTTCCATACAGAGCAAATGTTTCAACTTGTATCATTGTCTCAGTGACCACAATAAAGAGACCAATGAAAAACA
>XM_043237017.1
TAGCTCCAGCTGcagcgagagaaagaaagagcctGAAATTCTCTTTGTGTTGGAGCGCTATCGAGACGAGAGAGCGAATTTCTGCTATGTTTTGAAAGCTAAAACATTCCAGAGGTTATCATCACTGAAGTGAAGGGTCACGCTCTCAGAATTGAAGCATGGATGATGATTTCGAGCGGCGCAGGGAGCTCAGGAGACAGAAGCGGGAGGAGATGCGTCTGGAAGCCGAGAGGATGGCATATCGCCGgaatgaggaggatgaggaagaggcGGCTCGTGAGCGCAGACGAAGAGCGCGGCAGGAGAGAATGCGCAGCAAGGACAGCGAGGATGTGGCGTACCAACCCGAGACCCCCGAGCTCAACAACAGCCACAGCGTGACAGTGACAGAGAGCGTATCCACCTCAGTGGTGACTTCCAGCGGGACAGGCGAGGGGGACGATGAGGAGCAGGCCCTGCTGGAGCGCTTGGCCAAGAGAGAGGAGCGCAGGCAGAGGAGGATGAAGGAGGCGCTGGACAGACAGGAGGAGCCGGAGAGCACCAGAGGCCGGAGCTACGAGCCAGAGGAGGAGCACAACAGCAAGGAGGAGGTCAAAcaggcggaggaggaggaggaggaggtcgTCACCAGAGAGGAGGTGCTGGTGGAGGAAAAGCCCCGGAGGTCTTATTTCAGAGAACAGGAATCCGTTGAAGAAATATCTAAAATACCTGAGGAGGACGATAATGAGCAAGATGCTGTGCCTTCTTCTGAAGTACATGAGGTGCTTGTAAATGAAGACGTAGATGATTCCGCAGTTGTTTCGGAGGTGGAAAAGAGTGAGATAGAGGGATTGACAGAGAATGGAGTGGATGAGATGAGAGAGGCAGAAAACTTTGAGAAATATGAGGTTTCAGAAAATGACGAGTGTTTGATGGAAGATGAAGATGTGATGAGGAAGAATAAACAGCCCAATGGAGGAGTGTGCGAGGACAGCACTCCCAAACACAAGAAAGCTGAGAGAACTTTCAGCCGAGGCAGCTTGCGCTCTCCTGAGGCGCCGGAGGCAGACGAGGCAGACAGCGAGGATGCTCGCTTGGAAGCCGAGAGAAAGCTGGAGGAACTGAAGAGGAGAAGAGATGAGATGGAGAGCGAGGAGTTCGAGAGGATGAGGCAGAAACAGCAGGAGGCCgaggtggagctggaggagctgaagaggaagagggaggagaggaggaaggTGCTGGAAGAGGAGGAGCGGCGGAGGAAGCAGGAGGAGGCCGAGAGGAAAGCCAGAGAGGAGGAGGaaaagaggaggatgaaggagGAGATCGAGAAGAGAAGAGCAGAGGCGGCTGAGAAGAGGCAGAAAGTGGAGGATTCGGTGGACGGAGAAGCCAGGAAGCCCTTTAAGTGTGTCAGTCCCAGAGGATCCTCCCTGAAGATCGGTGAGAGGGCAGAATTTCTCAACAGATCAGCACAGAAGAGTTCTGTGAAGGCGTCTCACTCTCCTGTGGTGTCCAAGATTGATAACCGATTAGAGCAGTACACCAGCGCCGTGCAGGGCAACAGAGAGGTCAGATCTCCCAGATCAGCTGCCATAGATCTTCCCATGGTGACGGACGGTATTCGCAACATTAAGAGCATGTGGGAGAAGGGGAATGTCTTCAGCTCTGGTGGGAGCCCAGCGTCCACCAACAAGGATGCAGCTGGGATAAAGGTGGGCGTGGCTGGGCGCATCAACGATTGGTTGAACAAAACTCCAGAGATGGGCAAAATGGCAGGAGGAAGACCCGCGGACCTAAAACCAGGCGACGTGACCAGCAAGCGCAATCTATGGGAAAACAAAGGATCCTCTGCTACCAAGGTCACAAGCAGAGGAGAGACCAAATCCGTCACCAATGgaATGGGCCATTAACCCTTCAAAGACGCCAGAGGCAGGGACCAAGAGAATGCACaacattcctttttttaatcttttattaataccaaaaaaaaatacaagcattTTATACTGCCAGGAAGATCTATGTGAGTAGACACAgtataaaagagagaaaaattaaaaaatatatatattttatcactgTATTCACAGGTCACCGTCTTACACCATCATAACATAAACGCAATGCCTTTGCATGTAACTTCTGTTAAACTGAAATCAAGGCTGTGAAAACAAGCAAgtcatttgtttagtttatatataacaattaaataacagCAGCCAACTTCAAACATTATGAGATTCCTTGAAAAGGAGGACGAGGAGTTGCATTCCGAATCTGTCAAATCACTCATTTTAAACATGTTAGTTACCCTTCTCACCTGTTAATTTATAACTAAAGCAAAGCTTCACCTTGCATTTCATGCCTGTTCGCCAGTTCCAGACCGAATATGAGCACCGTAGTGTAGctgtattttgtactttttgtcgtaacgacacttttttttaataaaaattgtctTAATAATATATGTTAGCACATAGTGTAAGTTTTTGTaattaactatatattttactgCTTGATACAAAATGGTCTTTGCTTTTGCtctcaatattattttatatcaaagcAAATTTTAATTCAGAAGAAGTCCATTATAGTCACACTGATGGCATCATTACATTATCATTGGCTTTTTTACTCTTGGAAACACCGTTGTTTGTGACCATCTTTTTGTAAGTGTTAATAGTGGAATAATCGGTATTGGTTAAAAAACTTAAACTCGAAAGAAAGGGAACATGCACTTTTTGATttaagtgcccctattattattaaagcagtgtgagcttttaacgctccaaaagcagcacatAGTGGCAAacaatgaatttgcatttcCAATGTGAAAAGATCAAGTGACATCCAAATTTTGATGTCAAcgtgaaacggcttgggactcgttttaaaagcGACACATTTCAATGAATCAAAGTCAGCTCTTTCAGAgtcaataactttatacatagtgcactttcagattttgcaggatgttttcattcgctttgagctgtgttacacactgcatgaaagctcattttcaaaaaatccataataggggcactttaaatgtcatatttgatGAGTACATTTCGCAATTTTTGCATATAATGCAAGGCTTTGATTAATCCAGAAACATCCATTTAGAAGAACAAAATCAATTCATGTTTATTGTTCAAGTGTTATATTTTCTACTTTCTGTTGCGATCATTCATACTAAATGGTAACATGGATGTCATCGCCTTACAGTAGTGCTAGCCGTCATGTAAACGCGTATCATTTCTGACGTCTTTTGTCAGACAAAGAATATCCAGTTCTGCCGCCGTAGCTTATCGCTAATGTCTCTAAATGTGCAAAGTTCCTGTATTCTGCTTGTATTTTTTGacaatcaagttttttttactatttgtttCAACACTTATGTATTGTTTCAGAGTAACACTATGCAAGTCGCACCACCTTTAATTGCAATTACCTTGTTACAAATATGACCGTTTTTGTAGCCAATAGTTCCATACAGAGCAAATGTTTCAACTTGTATCATTGTCTCAGTGACCACAATAAAGAGACCAATGAAAAACA
>XM_043237018.1
AACGGCTTCTAAAGGGCGGAGCTTCCCAAACTCAGAGTCCTGTTACTGAACGCTGGAGATTTTGGGAGTGAAGGAACAGCTCAAGTCATTTTCTCTTTGCAGGTTTCTTCGCACATCTAAAGGACGCACGCTTCGTTCGCCTCAACGCGCAGGGTCACGCTCTCAGAATTGAAGCATGGATGATGATTTCGAGCGGCGCAGGGAGCTCAGGAGACAGAAGCGGGAGGAGATGCGTCTGGAAGCCGAGAGGATGGCATATCGCCGgaatgaggaggatgaggaagaggcGGCTCGTGAGCGCAGACGAAGAGCGCGGCAGGAGAGAATGCGCAGCAAGGACAGCGAGGATGTGGCGTACCAACCCGAGACCCCCGAGCTCAACAACAGCCACAGCGTGACAGTGACAGAGAGCGTATCCACCTCAGTGGTGACTTCCAGCGGGACAGGCGAGGGGGACGATGAGGAGCAGGCCCTGCTGGAGCGCTTGGCCAAGAGAGAGGAGCGCAGGCAGAGGAGGATGAAGGAGGCGCTGGACAGACAGGAGGAGCCGGAGAGCACCAGAGGCCGGAGCTACGAGCCAGAGGAGGAGCACAACAGCAAGGAGGAGGTCAAAcaggcggaggaggaggaggaggaggtcgTCACCAGAGAGGAGGTGCTGGTGGAGGAAAAGCCCCGGAGGTCTTATTTCAGAGAACAGGAATCCGTTGAAGAAATATCTAAAATACCTGAGGAGATGGAAGATGAAGATGTGATGAGGAAGAATAAACAGCCCAATGGAGGAGTGTGCGAGGACAGCACTCCCAAACACAAGAAAGCTGAGAGAACTTTCAGCCGAGGCAGCTTGCGCTCTCCTGAGGCGCCGGAGGCAGACGAGGCAGACAGCGAGGATGCTCGCTTGGAAGCCGAGAGAAAGCTGGAGGAACTGAAGAGGAGAAGAGATGAGATGGAGAGCGAGGAGTTCGAGAGGATGAGGCAGAAACAGCAGGAGGCCgaggtggagctggaggagctgaagaggaagagggaggagaggaggaaggTGCTGGAAGAGGAGGAGCGGCGGAGGAAGCAGGAGGAGGCCGAGAGGAAAGCCAGAGAGGAGGAGGaaaagaggaggatgaaggagGAGATCGAGAAGAGAAGAGCAGAGGCGGCTGAGAAGAGGCAGAAAGTGGAGGATTCGGTGGACGGAGAAGCCAGGAAGCCCTTTAAGTGTGTCAGTCCCAGAGGATCCTCCCTGAAGATCGGTGAGAGGGCAGAATTTCTCAACAGATCAGCACAGAAGAGTTCTGTGAAGGCGTCTCACTCTCCTGTGGTGTCCAAGATTGATAACCGATTAGAGCAGTACACCAGCGCCGTGCAGGGCAACAGAGAGGTCAGATCTCCCAGATCAGCTGCCATAGATCTTCCCATGGTGACGGACGGTATTCGCAACATTAAGAGCATGTGGGAGAAGGGGAATGTCTTCAGCTCTGGTGGGAGCCCAGCGTCCACCAACAAGGATGCAGCTGGGATAAAGGTGGGCGTGGCTGGGCGCATCAACGATTGGTTGAACAAAACTCCAGAGATGGGCAAAATGGCAGGAGGAAGACCCGCGGACCTAAAACCAGGCGACGTGACCAGCAAGCGCAATCTATGGGAAAACAAAGGATCCTCTGCTACCAAGGTCACAAGCAGAGGAGAGACCAAATCCGTCACCAATGgaATGGGCCATTAACCCTTCAAAGACGCCAGAGGCAGGGACCAAGAGAATGCACaacattcctttttttaatcttttattaataccaaaaaaaaatacaagcattTTATACTGCCAGGAAGATCTATGTGAGTAGACACAgtataaaagagagaaaaattaaaaaatatatatattttatcactgTATTCACAGGTCACCGTCTTACACCATCATAACATAAACGCAATGCCTTTGCATGTAACTTCTGTTAAACTGAAATCAAGGCTGTGAAAACAAGCAAgtcatttgtttagtttatatataacaattaaataacagCAGCCAACTTCAAACATTATGAGATTCCTTGAAAAGGAGGACGAGGAGTTGCATTCCGAATCTGTCAAATCACTCATTTTAAACATGTTAGTTACCCTTCTCACCTGTTAATTTATAACTAAAGCAAAGCTTCACCTTGCATTTCATGCCTGTTCGCCAGTTCCAGACCGAATATGAGCACCGTAGTGTAGctgtattttgtactttttgtcgtaacgacacttttttttaataaaaattgtctTAATAATATATGTTAGCACATAGTGTAAGTTTTTGTaattaactatatattttactgCTTGATACAAAATGGTCTTTGCTTTTGCtctcaatattattttatatcaaagcAAATTTTAATTCAGAAGAAGTCCATTATAGTCACACTGATGGCATCATTACATTATCATTGGCTTTTTTACTCTTGGAAACACCGTTGTTTGTGACCATCTTTTTGTAAGTGTTAATAGTGGAATAATCGGTATTGGTTAAAAAACTTAAACTCGAAAGAAAGGGAACATGCACTTTTTGATttaagtgcccctattattattaaagcagtgtgagcttttaacgctccaaaagcagcacatAGTGGCAAacaatgaatttgcatttcCAATGTGAAAAGATCAAGTGACATCCAAATTTTGATGTCAAcgtgaaacggcttgggactcgttttaaaagcGACACATTTCAATGAATCAAAGTCAGCTCTTTCAGAgtcaataactttatacatagtgcactttcagattttgcaggatgttttcattcgctttgagctgtgttacacactgcatgaaagctcattttcaaaaaatccataataggggcactttaaatgtcatatttgatGAGTACATTTCGCAATTTTTGCATATAATGCAAGGCTTTGATTAATCCAGAAACATCCATTTAGAAGAACAAAATCAATTCATGTTTATTGTTCAAGTGTTATATTTTCTACTTTCTGTTGCGATCATTCATACTAAATGGTAACATGGATGTCATCGCCTTACAGTAGTGCTAGCCGTCATGTAAACGCGTATCATTTCTGACGTCTTTTGTCAGACAAAGAATATCCAGTTCTGCCGCCGTAGCTTATCGCTAATGTCTCTAAATGTGCAAAGTTCCTGTATTCTGCTTGTATTTTTTGacaatcaagttttttttactatttgtttCAACACTTATGTATTGTTTCAGAGTAACACTATGCAAGTCGCACCACCTTTAATTGCAATTACCTTGTTACAAATATGACCGTTTTTGTAGCCAATAGTTCCATACAGAGCAAATGTTTCAACTTGTATCATTGTCTCAGTGACCACAATAAAGAGACCAATGAAAAACA
>XM_043237019.1
ACGGCTTCTAAAGGGCGGAGCTTCCCAAACTCAGAGTCCTGTTACTGAACGCTGGAGATTTTGGGAGTGAAGGAACAGCTCAAGTCATTTTCTCTTTGCAGGTTTCTTCGCACATCTAAAGGACGCACGCTTCGTTCGCCTCAACGCGCAGGGTCACGCTCTCAGAATTGAAGCATGGATGATGATTTCGAGCGGCGCAGGGAGCTCAGGAGACAGAAGCGGGAGGAGATGCGTCTGGAAGCCGAGAGGATGGCATATCGCCGgaatgaggaggatgaggaagaggcGGCTCGTGAGCGCAGACGAAGAGCGCGGCAGGAGAGAATGCGCAGCAAGGACAGCGAGGATGTGGCGTACCAACCCGAGACCCCCGAGCTCAACAACAGCCACAGCGTGACAGTGACAGAGAGCGTATCCACCTCAGTGGTGACTTCCAGCGGGACAGGCGAGGGGGACGATGAGGAGCAGGCCCTGCTGGAGCGCTTGGCCAAGAGAGAGGAGCGCAGGCAGAGGAGGATGAAGGAGGCGCTGGACAGACAGGAGGAGCCGGAGAGCACCAGAGGCCGGAGCTACGAGCCAGAGGAGGAGCACAACAGCAAGGAGGAGGTCAAAcaggcggaggaggaggaggaggaggtcgTCACCAGAGAGGAGGTGCTGGTGGAGGAAAAGCCCCGGAGGTCTTATTTCAGAGAACAGATGGAAGATGAAGATGTGATGAGGAAGAATAAACAGCCCAATGGAGGAGTGTGCGAGGACAGCACTCCCAAACACAAGAAAGCTGAGAGAACTTTCAGCCGAGGCAGCTTGCGCTCTCCTGAGGCGCCGGAGGCAGACGAGGCAGACAGCGAGGATGCTCGCTTGGAAGCCGAGAGAAAGCTGGAGGAACTGAAGAGGAGAAGAGATGAGATGGAGAGCGAGGAGTTCGAGAGGATGAGGCAGAAACAGCAGGAGGCCgaggtggagctggaggagctgaagaggaagagggaggagaggaggaaggTGCTGGAAGAGGAGGAGCGGCGGAGGAAGCAGGAGGAGGCCGAGAGGAAAGCCAGAGAGGAGGAGGaaaagaggaggatgaaggagGAGATCGAGAAGAGAAGAGCAGAGGCGGCTGAGAAGAGGCAGAAAGTGGAGGATTCGGTGGACGGAGAAGCCAGGAAGCCCTTTAAGTGTGTCAGTCCCAGAGGATCCTCCCTGAAGATCGGTGAGAGGGCAGAATTTCTCAACAGATCAGCACAGAAGAGTTCTGTGAAGGCGTCTCACTCTCCTGTGGTGTCCAAGATTGATAACCGATTAGAGCAGTACACCAGCGCCGTGCAGGGCAACAGAGAGGTCAGATCTCCCAGATCAGCTGCCATAGATCTTCCCATGGTGACGGACGGTATTCGCAACATTAAGAGCATGTGGGAGAAGGGGAATGTCTTCAGCTCTGGTGGGAGCCCAGCGTCCACCAACAAGGATGCAGCTGGGATAAAGGTGGGCGTGGCTGGGCGCATCAACGATTGGTTGAACAAAACTCCAGAGATGGGCAAAATGGCAGGAGGAAGACCCGCGGACCTAAAACCAGGCGACGTGACCAGCAAGCGCAATCTATGGGAAAACAAAGGATCCTCTGCTACCAAGGTCACAAGCAGAGGAGAGACCAAATCCGTCACCAATGgaATGGGCCATTAACCCTTCAAAGACGCCAGAGGCAGGGACCAAGAGAATGCACaacattcctttttttaatcttttattaataccaaaaaaaaatacaagcattTTATACTGCCAGGAAGATCTATGTGAGTAGACACAgtataaaagagagaaaaattaaaaaatatatatattttatcactgTATTCACAGGTCACCGTCTTACACCATCATAACATAAACGCAATGCCTTTGCATGTAACTTCTGTTAAACTGAAATCAAGGCTGTGAAAACAAGCAAgtcatttgtttagtttatatataacaattaaataacagCAGCCAACTTCAAACATTATGAGATTCCTTGAAAAGGAGGACGAGGAGTTGCATTCCGAATCTGTCAAATCACTCATTTTAAACATGTTAGTTACCCTTCTCACCTGTTAATTTATAACTAAAGCAAAGCTTCACCTTGCATTTCATGCCTGTTCGCCAGTTCCAGACCGAATATGAGCACCGTAGTGTAGctgtattttgtactttttgtcgtaacgacacttttttttaataaaaattgtctTAATAATATATGTTAGCACATAGTGTAAGTTTTTGTaattaactatatattttactgCTTGATACAAAATGGTCTTTGCTTTTGCtctcaatattattttatatcaaagcAAATTTTAATTCAGAAGAAGTCCATTATAGTCACACTGATGGCATCATTACATTATCATTGGCTTTTTTACTCTTGGAAACACCGTTGTTTGTGACCATCTTTTTGTAAGTGTTAATAGTGGAATAATCGGTATTGGTTAAAAAACTTAAACTCGAAAGAAAGGGAACATGCACTTTTTGATttaagtgcccctattattattaaagcagtgtgagcttttaacgctccaaaagcagcacatAGTGGCAAacaatgaatttgcatttcCAATGTGAAAAGATCAAGTGACATCCAAATTTTGATGTCAAcgtgaaacggcttgggactcgttttaaaagcGACACATTTCAATGAATCAAAGTCAGCTCTTTCAGAgtcaataactttatacatagtgcactttcagattttgcaggatgttttcattcgctttgagctgtgttacacactgcatgaaagctcattttcaaaaaatccataataggggcactttaaatgtcatatttgatGAGTACATTTCGCAATTTTTGCATATAATGCAAGGCTTTGATTAATCCAGAAACATCCATTTAGAAGAACAAAATCAATTCATGTTTATTGTTCAAGTGTTATATTTTCTACTTTCTGTTGCGATCATTCATACTAAATGGTAACATGGATGTCATCGCCTTACAGTAGTGCTAGCCGTCATGTAAACGCGTATCATTTCTGACGTCTTTTGTCAGACAAAGAATATCCAGTTCTGCCGCCGTAGCTTATCGCTAATGTCTCTAAATGTGCAAAGTTCCTGTATTCTGCTTGTATTTTTTGacaatcaagttttttttactatttgtttCAACACTTATGTATTGTTTCAGAGTAACACTATGCAAGTCGCACCACCTTTAATTGCAATTACCTTGTTACAAATATGACCGTTTTTGTAGCCAATAGTTCCATACAGAGCAAATGTTTCAACTTGTATCATTGTCTCAGTGACCACAATAAAGAGACCAATGAAAAACA
>XR_006250653.1
AACGGCTTCTAAAGGGCGGAGCTTCCCAAACTCAGAGTCCTGTTACTGAACGCTGGAGATTTTGGGAGTGAAGGAACAGCTCAAGTCATTTTCTCTTTGCAGGTTTCTTCGCACATCTAAAGGACGCACGCTTCGTTCGCCTCAACGCGCAGGGTCACGCTCTCAGAATTGAAGCATGGATGATGATTTCGAGCGGCGCAGGGAGCTCAGGAGACAGAAGCGGGAGGAGATGCGTCTGGAAGCCGAGAGGATGGCATATCGCCGgaatgaggaggatgaggaagaggcGGCTCGTGAGCGCAGACGAAGAGCGCGGCAGGAGAGAATGCGCAGCAAGGACAGCGAGGATGTGGCGTACCAACCCGAGACCCCCGAGCTCAACAACAGCCACAGCGTGACAGTGACAGAGAGCGTATCCACCTCAGTGGTGACTTCCAGCGGGACAGGCGAGGGGGACGATGAGGAGCAGGCCCTGCTGGAGCGCTTGGCCAAGAGAGAGGAGCGCAGGCAGAGGAGGATGAAGGAGGCGCTGGACAGACAGGAGGAGCCGGAGAGCACCAGAGGCCGGAGCTACGAGCCAGAGGAGGAGCACAACAGCAAGGAGGAGGTCAAAcaggcggaggaggaggaggaggaggtcgTCACCAGAGAGGAGGTGCTGGTGGAGGAAAAGCCCCGGAGGTCTTATTTCAGAGAACAGGAATCCGTTGAAGAAATATCTAAAATACCTGAGGAGGACGATAATGAGCAAGATGCTGTGCCTTCTTCTGAAGTACATGAGGTGCTTGTAAATGAAGACGTAGATGATTCCGCAGTTGTTTCGGAGGTGGAAAAGAGTGAGATAGAGGGATTGACAGAGAATGGAGTGGATGAGATGAGAGAGGCAGAAAACTTTGAGAAATATGAGGTTTCAGAAAATGACGAGTGTTTGATGGAAGATGAAGATGTGATGAGGAAGAATAAACAGCCCAATGGAGGAGTGTGCGAGGACAGCACTCCCAAACACAAGAAAGCTGAGAGAACTTTCAGCCGAGGCAGCTTGCGCTCTCCTGAGGCGCCGGAGGCAGACGAGGCAGACAGCGAGGATGCTCGCTTGGAAGCCGAGAGAAAGCTGGAGGAACTGAAGAGGAGAAGAGATGAGATGGAGAGCGAGGAGTTCGAGAGGATGAGGCAGAAACAGCAGGAGGCCgaggtggagctggaggagctgaagaggaagagggaggagaggaggaaggTGCTGGAAGAGGAGGAGCGGCGGAGGAAGCAGGAGGAGGCCGAGAGGAAAGCCAGAGAGGAGGAGGaaaagaggaggatgaaggagGAGATCGAGAAGAGAAGAGCAGAGGCGGCTGAGAAGAGGCAGAAAGTGGAGGATTCGGTGGACGGAGAAGCCAGGAAGCCCTTTAAGTGTGTCAGTCCCAGAGGATCCTCCCTGAAGATCGGTGAGAGGGCAGAATTTCTCAACAGATCAGCACAGAAGAGTTCTGTGAAGGCGTCTCACTCTCCTGTGGTGTCCAAGATTGATAACCGATTAGAGCAGTACACCAGCGCCGTGCAGGGCAACAGAGAGGTCAGATCTCCCAGATCAGCTGCCATAGATCTTCCCATGGTGACGGACGGTATTCGCAACATTAAGAGCATGTGGGAGAAGGGGAATGTCTTCAGCTCTGGTGGGAGCCCAGCGTCCACCAACAAGGATGCAGCTGGGATAAAGGTGGGCGTGGCTGGGCGCATCAACGATTGGTTGAACAAAACTCCAGAGATGGGCAAAATGGCAGGAGGAAGACCCGCGGACCTAAAACCAGGCGACGTGACCAGCAAGCGCAATCTATGGGAAAACAAAGGATCCTCTGCTACCAAGcCGTCCCCTTGCTAATTGACTACAGATCTGACCACCTTGAGGAGGTCACAAGCAGAGGAGAGACCAAATCCGTCACCAATGgaATGGGCCATTAACCCTTCAAAGACGCCAGAGGCAGGGACCAAGAGAATGCACaacattcctttttttaatcttttattaataccaaaaaaaaatacaagcattTTATACTGCCAGGAAGATCTATGTGAGTAGACACAgtataaaagagagaaaaattaaaaaatatatatattttatcactgTATTCACAGGTCACCGTCTTACACCATCATAACATAAACGCAATGCCTTTGCATGTAACTTCTGTTAAACTGAAATCAAGGCTGTGAAAACAAGCAAgtcatttgtttagtttatatataacaattaaataacagCAGCCAACTTCAAACATTATGAGATTCCTTGAAAAGGAGGACGAGGAGTTGCATTCCGAATCTGTCAAATCACTCATTTTAAACATGTTAGTTACCCTTCTCACCTGTTAATTTATAACTAAAGCAAAGCTTCACCTTGCATTTCATGCCTGTTCGCCAGTTCCAGACCGAATATGAGCACCGTAGTGTAGctgtattttgtactttttgtcgtaacgacacttttttttaataaaaattgtctTAATAATATATGTTAGCACATAGTGTAAGTTTTTGTaattaactatatattttactgCTTGATACAAAATGGTCTTTGCTTTTGCtctcaatattattttatatcaaagcAAATTTTAATTCAGAAGAAGTCCATTATAGTCACACTGATGGCATCATTACATTATCATTGGCTTTTTTACTCTTGGAAACACCGTTGTTTGTGACCATCTTTTTGTAAGTGTTAATAGTGGAATAATCGGTATTGGTTAAAAAACTTAAACTCGAAAGAAAGGGAACATGCACTTTTTGATttaagtgcccctattattattaaagcagtgtgagcttttaacgctccaaaagcagcacatAGTGGCAAacaatgaatttgcatttcCAATGTGAAAAGATCAAGTGACATCCAAATTTTGATGTCAAcgtgaaacggcttgggactcgttttaaaagcGACACATTTCAATGAATCAAAGTCAGCTCTTTCAGAgtcaataactttatacatagtgcactttcagattttgcaggatgttttcattcgctttgagctgtgttacacactgcatgaaagctcattttcaaaaaatccataataggggcactttaaatgtcatatttgatGAGTACATTTCGCAATTTTTGCATATAATGCAAGGCTTTGATTAATCCAGAAACATCCATTTAGAAGAACAAAATCAATTCATGTTTATTGTTCAAGTGTTATATTTTCTACTTTCTGTTGCGATCATTCATACTAAATGGTAACATGGATGTCATCGCCTTACAGTAGTGCTAGCCGTCATGTAAACGCGTATCATTTCTGACGTCTTTTGTCAGACAAAGAATATCCAGTTCTGCCGCCGTAGCTTATCGCTAATGTCTCTAAATGTGCAAAGTTCCTGTATTCTGCTTGTATTTTTTGacaatcaagttttttttactatttgtttCAACACTTATGTATTGTTTCAGAGTAACACTATGCAAGTCGCACCACCTTTAATTGCAATTACCTTGTTACAAATATGACCGTTTTTGTAGCCAATAGTTCCATACAGAGCAAATGTTTCAACTTGTATCATTGTCTCAGTGACCACAATAAAGAGACCAATGAAAAACA

Function

symbol description
cald1a Predicted to enable actin binding activity and myosin binding activity. Acts upstream of or within peristalsis. Predicted to be active in actin cytoskeleton. Is expressed in intestinal epithelium and intestine. Orthologous to human CALD1 (caldesmon 1).

NR:

description
PREDICTED: non-muscle caldesmon-like isoform X2

GO:

id name namespace
GO:0006936 muscle contraction biological_process
GO:0017022 myosin binding molecular_function
GO:0005516 calmodulin binding molecular_function
GO:0003779 actin binding molecular_function

KEGG:

id description
K12327 CALD1; caldesmon

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237016.1 False 3584 mRNA 0.45 16 2042953 2088579
XM_043237017.1 False 3567 mRNA 0.45 16 2042953 2067924
XM_043237018.1 False 3389 mRNA 0.45 15 2042953 2088579
XM_043237019.1 False 3352 mRNA 0.45 14 2042953 2088578
XR_006250653.1 True 3628 transcript 0.45 17 2042953 2088579

Neighbor

gene id symbol gene type direction distance location
tnnt2e tnnt2e,LOC107658902,LOC107725993,LOC107656364,LOC107710083,LOC108425385 coding downstream 92 2032823 ~ 2042861 (-)
arl1 arl1,LOC107576237 coding downstream 18744 2022325 ~ 2024209 (-)
slc5a8 LOC107710085 coding downstream 42878 1995442 ~ 2000075 (-)
foxm1 LOC107658881,LOC107710101,LOC107656265 coding downstream 57895 1979107 ~ 1985058 (-)
pgm3 pgm3,LOC107579473,LOC107656266,LOC107658887 coding downstream 70543 1965852 ~ 1972410 (-)
tmem168a tmem168a,LOC107658875,LOC107726047,LOC107710117,LOC107656353 coding upstream 327087 2415666 ~ 2423463 (-)
gpr85 gpr85,LOC107580073,LOC107710116,LOC107726048,LOC107658873,LOC107584006 coding upstream 378508 2467087 ~ 2471272 (-)
ppp1r3aa LOC107658872,LOC107584007,LOC107726069 coding upstream 411195 2499774 ~ 2504213 (-)
tfec LOC107584009,LOC107725982,LOC107658865,LOC107710111,LOC107580185,LOC107656331 coding upstream 694882 2783461 ~ 2823147 (-)
lta4h lta4h,LOC107658863,LOC107656327,LOC107744078 coding upstream 747269 2835848 ~ 2845005 (-)
G25277 NA non-coding downstream 10297 2032241 ~ 2032656 (-)
G25240 NA non-coding downstream 49197 1991992 ~ 1993756 (-)
G25190 NA non-coding downstream 139492 1903185 ~ 1903461 (-)
G25188 NA non-coding downstream 144696 1896886 ~ 1898257 (-)
G25185 NA non-coding downstream 197553 1845129 ~ 1845400 (-)
LOC122343450 NA non-coding upstream 18185 2106764 ~ 2118325 (-)
G25298 LOC107549254,LOC107563058 non-coding upstream 73951 2162530 ~ 2163319 (-)
G25299 LOC108267243 non-coding upstream 74847 2163426 ~ 2163708 (-)
LOC122343454 NA non-coding upstream 78726 2167305 ~ 2182669 (-)
LOC122343417 NA non-coding upstream 115006 2203585 ~ 2289119 (-)
rsph9 rsph9,LOC107658900,LOC107583979,LOC107579672,LOC107710090,LOC107656226 other downstream 140290 1898403 ~ 1902663 (-)
ccdc167 ccdc167 other downstream 388127 1653591 ~ 1654826 (-)
zgc:113263 LOC107658878,LOC107583959,LOC107725918,LOC107656382,LOC107711463 other downstream 424655 1609360 ~ 1618298 (-)
selenoo2 selenoo,si:dkey-14d8.2,LOC107579362,LOC107711485 other downstream 438263 1594284 ~ 1604690 (-)
LOC122342802 LOC107711465,LOC107656235 other downstream 456764 1580480 ~ 1586189 (-)
tnni4a zgc:101560,LOC107725970,LOC107584059,LOC107658770,LOC107656258,LOC107581287 other upstream 2772 2091351 ~ 2097801 (-)
dock4b dock4b,LOC107656358,LOC108425388 other upstream 211056 2299635 ~ 2375716 (-)
LOC122342907 NA other upstream 383705 2472284 ~ 2473068 (-)
ccdc3a ccdc3,ccdc3a,LOC107725961,LOC107658768,LOC107580337,LOC107744050 other upstream 911303 2999882 ~ 3012214 (-)
LOC122342805 NA other upstream 930513 3019092 ~ 3021512 (-)

Expression


Co-expression Network