prkchb (prkchb,LOC107743988,LOC107697294,LOC107701491,LOC107718442,LOC107589067,LOC107563690)


Basic Information

Item Value
gene id prkchb
gene name prkchb,LOC107743988,LOC107697294,LOC107701491,LOC107718442,LOC107589067,LOC107563690
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 16886153 ~ 16900295 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237030.1
gagagagagagagagcatttcCTGCTCTCTTTGGTTTgctcttttagttttaatgactATGCTACAAAACGTCTCTGCGTTTATTTGAACGTGTTGTTTTGTTCTTCATTATGAGTTGGTGTTAGCtcgtttttttctccatatgactgttttgatttcatttattcattttttttgtttgtgtgtgtgtgcatcgaATTTAAATATTGCGACAATATGAAATTCAACGGATATCTGAGGCTGCGTATCGGGGAGGCGGTGGATTTAAAACCAACAACGTATTCGACTCGCCACACTTTTCACAAGAAAATCGTCCTGGATCCGTATGTCGTTGTTAAAATCGATAATCTGAAAGTTGGACAGACCGCCACAAAATCGAAAACCAACAAACCGACCTTCAACGATGAATTCTGCCCGTACATTACAAACGGCAAAGAGCTGGAGCTGGCCGTTTTCCACAACACTCCTATAGGATACGACAACTTTGTCGCCAATTACAGAATCCAGCTCGATGAGCTGATAACGTCGTCAAACCCAAGACAAACGTTTGAAGGATGGGTGAATCTGGAACCAGAGGGAAGTGTGTATATCTCCATCTCTCTCACCGGCTCCTTTACAGATGATGAAGCTGTGAATGGACTGAAACCTCATAAAAAGTTTACAAGAAAAAGGCAAAAAGCTCTGAAGAAAAGAAAGGTCCACCAAGTCTATGGACACAAGTTTATGGCAACCTTCCTTCCCCAGCCTACTTTTTGTTGCCATTGCAGCAACTTTATCTGGGGTGTTTTTGGAAAGCAAGGTTATCAGTGTCAAGTGTGTGCCTGTGTGGTTCACAAGAGGTGTCATGATTTGGTTGTAAGTGAGTGTACACGTATGAAGAAAGATTTAAATGAGGGCCAAAGACAGGGCTTTAGCATCAACCTACCTCACCAGTTTAGGGAGCACAACTACAAAGTTCCCACATATTGTAACCACTGTGGATCTTTGCTTTACGGCCTGATAAAACAGGGGCTCCAATGCAAGAGTTGCAAGATGAACATCCACAAACGCTGTGAACAGAATGTTGCACTTAACTGTGGGGTGAACAGTGCTGAGCTGGCCAGCAAATTGTCTGAGATCGGATTGCTTAACACTCTTTCTAAAAGGAAATCTCAGAGTTCTCTGCACATGACAGGAATAAAGTGTCAGAACTCTATTAAAGGTGTGCAGCCGACATCCGAAGAGTCAGAGGAAGATGCTGTTAAAGTCGGTCTGGAAGACTTCAGTTTCTTGCAGGTTCTGGGAAAAGGCAGCTTTGGCAAGgtGATGCTGGCTCGCCTAAAAAGTGACCACAGGGTGTTTGCTGTAAAAATGCTGAAGAAGGATGTCATACTACAAGAAGATGATGTGGAAGCAACCATGATTGAGAAGAGAGTGCTAACTCTGGCTCACCAGCATCCATTTCTTACACAGCTCTACTACTGCTTTCAAACTGCGGAGCGGTTATTCTTTGTCATGGAGTTTGTGAATGGCGGCGACCTAATGTTCCACATCCAGAAGTGCAGGCGCTTTGACGAGCCACGAGCACGCTTTTATGCCGCAGAGATCATTTCGGCCCTTATGTTCCTTCACTCCGAAGGCATCATTTACAGAGACCTCAAACTGGACAATATTCTCCTGGACAGAGATGGCCACTGCAAACTGGCAGATTTTGGCATGTGCAAAGAGGGTATACGTGAGGGAAAACTCACTAGTACCTTCTGTGGGACTCCCGATTATATTGCACCCGAGATCATCCTGGAGGACCCCTATGGAGTATCAGTGGACTGGTGGGCTCTGGGTGTGCTTCTTTACGAGATGCTGTCCGGCCATGCTCCATTTGAAGCAGAGACTGAGGACGAGTTGTTTGAGTGCATCCTCAAAGATGagatcatttattcatcttggCTCAGCAACGAGGCGGAGGACATCCTTAGAGGATTACTCACCAGAGACCCGGCGTGTCGGCTGGGCTGCatggagagagatggagaagagGCCATCACTACACACCGGTTCTTCACAGGACTGGACTGGGAGAAGCTGAACAGACGAGAGATTGCACCGCCTTTCACACCTCGAATAGATTCTATTGAGGATGTAAACAATTTTGACCCTGACTTCACTCAAGAGGAACCCTGTCTTACACCCATAGAGGACAGCCTTTTTCCTTTCCACCAGGACGATTTTAAAGACTTCACCTACACCGCTCCAGAGCTGCACTAACAACCGCtgtagattatttattttacagaaatagaTTGTTAATTAACTCCTCTTATCAAACTTGACGTGGTACGTTCTGTTGACAAACGTTTTGCCAAGTCTGTCAAGAACATAGACAAGATTCAAACTGGACGAAGGCAATACAATATACTCCACAGGACCATCCAGACCAAAGGATTATTCGTAATGGCAATGACTAGAAGGAAATAATGATTTCCCGAAACGAACGGATGCtttttgaaatggttttatCTGTATAAATGCACGCAAAGTCTATGTCGTATATTATTTGTGTTACAAGTAGCGTAATAATATCTTACAGCTCTTTAGTAAGCATggaaacaaatgtatattttttacattgagCTGTTAATTCAGTGTAACAGGTTGTTATGTGATGTGTTGTAAAGTAATTCTAACTAAAGTGTAAATTATAAACTTGGAAAATCCTTTTGTAACAGGC
>XR_006250655.1
gagagagagagagagagcatttcCTGCTCTCTTTGGTTTgctcttttagttttaatgactATGCTACAAAACGTCTCTGCGTTTATTTGAACGTGTTGTTTTGTTCTTCATTATGAGTTGGTGTTAGCtcgtttttttctccatatgactgttttgatttcatttattcattttttttgtttgtgtgtgtgtgcatcgaATTTAAATATTGCGACAATATGAAATTCAACGGATATCTGAGGCTGCGTATCGGGGAGGCGGTGGATTTAAAACCAACAACGTATTCGACTCGCCACACTTTTCACAAGAAAATCGTCCTGGATCCGTATGTCGTTGTTAAAATCGATAATCTGAAAGTTGGACAGACCGCCACAAAATCGAAAACCAACAAACCGACCTTCAACGATGAATTCTGCCCGTACATTACAAACGGCAAAGAGCTGGAGCTGGCCGTTTTCCACAACACTCCTATAGGATACGACAACTTTGTCGCCAATTACAGAATCCAGCTCGATGAGCTGATAACGTCGTCAAACCCAAGACAAACGTTTGAAGGATGGGTGAATCTGGAACCAGAGGGAAGTGTGTATATCTCCATCTCTCTCACCGGCTCCTTTACAGATGATGAAGCTGTGAATGGACTGAAACCTCATAAAAAGTTTACAAGAAAAAGGCAAAAAGCTCTGAAGAAAAGAAAGGTCCACCAAGTCTATGGACACAAGTTTATGGCAACCTTCCTTCCCCAGCCTACTTTTTGTTGCCATTGCAGCAACTTTATCTGGGGTGTTTTTGGAAAGCAAGGTTATCAGTGTCAAGTGTGTGCCTGTGTGGTTCACAAGAGGTGTCATGATTTGGTTGTAAGTGAGTGTACACGTATGAAGAAAGATTTAAATGAGGGCCAAAGACAGGGCTTTAGCATCAACCTACCTCACCAGTTTAGGGAGCACAACTACAAAGTTCCCACATATTGTAACCACTGTGGATCTTTGCTTTACGGCCTGATAAAACAGGGGCTCCAATGCAAGAGTTGCAAGATGAACATCCACAAACGCTGTGAACAGAATGTTGCACTTAACTGTGGGGTGAACAGTGCTGAGCTGGCCAGCAAATTGTCTGAGATCGGATTGCTTAACACTCTTTCTAAAAGGAAATCTCAGAGTTCTCTGCACATGACAGGAATAAAGTGTCAGAACTCTATTAAAGGTGTGCAGCCGACATCCGAAGAGTCAGAGGAAGATGCTGTTAAAGTCGGTCTGGAAGACTTCAGTTTCTTGCAGGTTCTGGGAAAAGGCAGCTTTGGCAAGgtGATGCTGGCTCGCCTAAAAAGTGACCACAGGGTGTTTGCTGTAAAAATGCTGAAGAAGGATGTCATACTACAAGAAGATGATGTGGAAGCAACCATGATTGAGAAGAGAGTGCTAACTCTGGCTCACCAGCATCCATTTCTTACACAGCTCTACTACTGCTTTCAAACTGCGGAGCGGTTATTCTTTGTCATGGAGTTTGTGAATGGCGGCGACCTAATGTTCCACATCCAGAAGTGCAGGCGCTTTGACGAGCCACGAGCACGCTTTTATGCCGCAGAGATCATTTCGGCCCTTATGTTCCTTCACTCCGAAGGCATCATTTACAGAGACCTCAAACTGGACAATATTCTCCTGGACAGAGATGGCCACTGCAAACTGGCAGATTTTGGCATGTGCAAAGAGGGTATACGTGAGGGAAAACTCACTAGTACCTTCTGTGGGACTCCCGATTATATTGCACCCGAGATCATCCTGGAGGACCCCTATGGAGTATCAGTGGACTGGTGGGCTCTGGGTGTGCTTCTTTACGAGATGCTGTCCGGCCATGCTCCATTTGAAGCAGAGACTGAGGACGAGTTGTTTGAGTGCATCCTCAAAGATGagatcatttattcatcttggCTCAGCAACGAGGCGGAGGACATCCTTAGAGGAGTGAGTCTAGAtctatttaatctatttaacCAGAGCAATGAAGACACTTGTAGCTCACTTGTAGCTAGATTATAGCTTCATATGTAAACACAGTAGCAAGTACGTTTGTCTTTTTGTCTACATTGACTCTCAGGCAGCTGTGTTGGGAAATCTGTGACTTTCCTGGCAGTGACGTCTTATTAAACaatcctcttcctcttctgttCTGATCACTCATTGCcaaaacatttatatcaaaactACTCAGTGGCATTTCATGCCGAAACATGACTTGGTCTTCAGCTTTACCcaccagaaaaaaaactcaaatctgGCTTCATTTAAGAGCTTCAAGTAACCATGTTTCTTGGCTAATGCAGCCGAGAGACTTTTCTGTGGGTTTTGGCCGGCGCTATGTAAGCACCAGTAAACATGAGGCTGATCTGCTGCGGAGAGCATGCTGTTTCATTCCTCAAAAGGCCCAGGATGTCAGGATCACAAGCTGTCTCTGTCCTTTGTGCCTCGTTACATAAGCTCCATTGTACCCCATTAAGGGTTAAAGAGCTGTGTCATGGTAGAAGGATTAACGTCATGTGATTGAGTAGAGGTCTTCTCGCATTAGTGGAGTAAAATCCCTAATAAACCTGTTTCCAAGGGCTCGAGTCGGTGATCTGTGCATTACTCACCAGAGACCCGGCGTGTCGGCTGGGCTGCatggagagagatggagaagagGCCATCACTACACACCGGTTCTTCACAGGACTGGACTGGGAGAAGCTGAACAGACGAGAGATTGCACCGCCTTTCACACCTCG

Function

symbol description
prkchb Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in cerebral infarction. Orthologous to human PRKCH (protein kinase C eta).

NR:

description
PREDICTED: protein kinase C eta type-like

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0004697 protein kinase C activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237030.1 False 2707 mRNA 0.43 14 16886153 16900293
XR_006250655.1 True 2758 transcript 0.45 13 16886974 16900295

Neighbor

gene id symbol gene type direction distance location
hif1ab hif1a,LOC107589062,LOC107743977,LOC107563689 coding downstream 4758 16868461 ~ 16881395 (-)
snapc1a LOC107743976,LOC107697295,LOC107589064 coding downstream 18168 16864505 ~ 16867985 (-)
sgpp1a si:ch211-212g7.6,LOC107697306,LOC107589063,LOC107743975,LOC107716492,LOC107701492,LOC107563688 coding downstream 21730 16852999 ~ 16864423 (-)
ppp2r5ea ppp2r5ea,LOC107701493,LOC107707079,LOC107563687,LOC107697307,LOC107743972,LOC108434994,LOC108257929,LOC103032801 coding downstream 34997 16840705 ~ 16851156 (-)
kcnh5a kcnh5a,LOC107743971,LOC107697309,LOC107563685,LOC107701494,LOC107707078,LOC108434995 coding downstream 64683 16748716 ~ 16821470 (-)
six6b six6b,six6,LOC107589092,LOC107743981,LOC107697293,LOC107701490,LOC103035477,LOC108257662 coding upstream 55225 16955520 ~ 16958074 (-)
ppm1ab ppm1ab,LOC107718411,LOC107697300,LOC107701489,LOC107589071,LOC107560378,LOC107743982 coding upstream 87013 16987308 ~ 16993364 (-)
ckbb ckb,ckbb,LOC107560383,LOC107755234,LOC101477834 coding upstream 185167 17085462 ~ 17089500 (-)
LOC122342663 NA coding upstream 223612 17123907 ~ 17130265 (-)
btbd6b btbd6b,LOC107589075,LOC107755235,LOC107718408,LOC107560384,LOC107701487,LOC107683969 coding upstream 237770 17138065 ~ 17143280 (-)
G29021 NA non-coding downstream 184482 16701068 ~ 16701671 (-)
G29012 NA non-coding downstream 276154 16609636 ~ 16609999 (-)
LOC122342602 NA non-coding downstream 335149 16550333 ~ 16551004 (-)
LOC122342601 NA non-coding downstream 340532 16544954 ~ 16545621 (-)
G28970 NA non-coding downstream 421474 16464445 ~ 16464679 (-)
LOC122342882 NA non-coding upstream 7914 16908209 ~ 16924965 (-)
G29127 NA non-coding upstream 55160 16955455 ~ 17026339 (-)
G29143 NA non-coding upstream 138532 17038827 ~ 17040834 (-)
G29179 NA non-coding upstream 318856 17219151 ~ 17219453 (-)
G29212 NA non-coding upstream 448994 17349289 ~ 17349506 (-)
G29022 chrna2b,LOC107697311,LOC107589091,LOC107723144,LOC107746381,LOC107563692,LOC107701496 other downstream 177193 16707774 ~ 16708960 (-)
G28898 NA other downstream 953289 15932494 ~ 15932864 (-)
kiaa0930 zgc:172139,kiaa0930,LOC107601010,LOC107719873,LOC107687566,LOC107699202 other downstream 1274578 15601440 ~ 15611575 (-)
LOC122342864 rpl34,LOC107566275,LOC107573163,LOC107681344 other downstream 1858490 15024587 ~ 15027663 (-)
LOC122342642 pfkfb3 other downstream 2075442 14808543 ~ 14810711 (-)
G29135 NA other upstream 106632 17006927 ~ 17017823 (-)
xrcc3 xrcc3,LOC107755221,LOC107683971,LOC107560377 other upstream 218048 17118343 ~ 17122129 (-)
srd5a3 srd5a3,LOC107755245,LOC107683999,LOC107665336,LOC107601910 other upstream 736728 17637023 ~ 17638742 (-)
LOC122342228 scgn,LOC107693759,LOC107757885,LOC107669120,LOC107714763,LOC107747999,LOC107663245 other upstream 834311 17734606 ~ 17744543 (-)
G29417 NA other upstream 835055 17735350 ~ 17736274 (-)

Expression


Co-expression Network