LOC122342889


Basic Information

Item Value
gene id LOC122342889
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1591389 ~ 1593369 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237040.1
GAACCAATGCCAGACAGATATAACAAACCTCAACCTTGACCTAACATGGAGAAGGAGGCAGcctcaatatttaaatatgcttcATTCTAATTATGTTCTTTAACAAGAGTGGACCCGCAAATTTAgggacagaaaaacaaaagcaggagTGAACATTGCagatttGTGGAAGTGGAAATTGTTTGTAATTTCCCAGACAAATCCCGTGGTGTTCATATATTTAGTGTCAAGCAACAATGCTCTGCTCCATGTGTCTCATTCTCTTTCTGAGCAATACCATTTCAGGTTCATCCGAATCAGTCATACTGACGTATGGTAATAACTCTTGTTCTGGAAGATTGGAGGTTTTCTATAACAATCAGTGGGGAACAGTGTGTGATAATGGCTGGAATCTGTCAGATGCAAAGGTGGTTTGTAGAGAGATGGGCTGCGGGGATGCTTTTGAGGCAAAGAGTGGTGCTTTTTTTGGACAAGGTGGGgcaaacatatttttgagcGAAATTAACTGTGTTGGAACTGAGTCTACGTTGAGCAGTTGCAGCTCTAAGAAACCGGGACAGTTTAACTGTGACCATTCAAAGGATGCTGGAGTCATCTGTCGCTCCCTTGTCAGATTGGTGAATGGCAGTCACTTCTGTTCTGGACGAGTAGAGGTTCTCAATGATGATCAGTGGGGAACAGTGTGCGATAGCGGCTGGGATTATTCAGATGCTGCAGTGATATGTAAAGAAATGGGCTGTGGGAATGTTTTTGACCTAAGGATCAGTGGGTTTTTTGGGCAGGGATCAGGACCGGTATGGCTAAGTGATGTACAATGTTCTAACACCGAATCAACTCTGAGACAATGTAATTTACAGGGATGGGCAAAAAACTCATGCGGACATGAGAAGGATGTTGCAGTCGCCTGTCAACGCAGAATTATGTTAGAAAATGGCTTCAGTGCTTGTTCTGGAAGAGTGGAAATTTTCTATAATCGCAGTGGATACAATGAGTGGGGAACAGTATGTGATAATAATTGGGATCTAACAGACGCTGCAGTGGTGTGTAGGGAGATGGGATGTGGAAATGCTATAGCAGCAAAGAGCGCTGCTTTTTTCGGAGCCGGTGGGGGTATAATATGGTTGGATAATGTCAACTGCATTGGAAATGAGCTCACCCTCGCAGCCTGTCAGTCCAACAGATTAGAATCTAACAATGTCCATTACAAGGATGTTGGAGTAATCTGTCAATGTAAGTTGGTCTATATAAGAATACTAAAAGAATATTGTAAATGAATattagttaacccaaaaattaaaaactttgttATCATTTAACTCTAGGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237040.1 True 1326 mRNA 0.42 5 1591389 1593369

Neighbor

gene id symbol gene type direction distance location
LOC122342888 LOC107584032,LOC107579834,LOC107656234,LOC107711464,LOC107725908 coding downstream 84 1588279 ~ 1591305 (-)
ano2b LOC107658923,LOC107726040,LOC107583957,LOC107579307,LOC107656385,LOC107711491 coding downstream 28842 1530792 ~ 1562547 (-)
gnsa gns,gnsa,LOC107658926,LOC107656403 coding downstream 118164 1468197 ~ 1473225 (-)
slc13a4 slc13a4,LOC107579393,LOC107656439,LOC107658938,LOC107584028 coding downstream 247359 1331022 ~ 1344030 (-)
asb15b asb15b,LOC107726003,LOC107658939,LOC107583946,LOC107656400,LOC107581016,LOC107711503 coding downstream 309682 1278010 ~ 1281707 (-)
LOC122342781 selenoo,LOC107579553,LOC107711487,LOC107725908,LOC105900684 coding upstream 8306 1601675 ~ 1603713 (-)
apex1 apex1,LOC107658891,LOC107725930,LOC107583973,LOC107656416 coding upstream 25608 1618977 ~ 1621881 (-)
si:ch211-214j24.10 si:ch211-214j24.10,LOC107725935,LOC107711484,LOC107583983,LOC107656420,LOC107579683,LOC107658903 coding upstream 31926 1625295 ~ 1628655 (-)
si:ch211-214j24.14 LOC107658910,LOC107579438,LOC107725940 coding upstream 61667 1655036 ~ 1658265 (-)
LOC122343486 LOC107583996,LOC107725944,LOC107658917,LOC107579452,LOC107656399,LOC107579492 coding upstream 73276 1666645 ~ 1670146 (-)
G25098 NA non-coding downstream 13664 1577201 ~ 1577725 (-)
G25028 NA non-coding downstream 14673 1576061 ~ 1576716 (-)
G25027 NA non-coding downstream 15970 1570293 ~ 1575419 (-)
G25019 tbc1d30,LOC107725910 non-coding downstream 110496 1478609 ~ 1480893 (-)
G25001 LOC107726026,LOC107658929,LOC107656386 non-coding downstream 171127 1418186 ~ 1420262 (-)
G25124 NA non-coding upstream 67236 1660605 ~ 1661388 (-)
G25125 LOC107583967,LOC107658918,LOC107725927,LOC107656410,LOC107711479 non-coding upstream 68976 1662345 ~ 1662607 (-)
G25126 cecr1b,LOC107656410,LOC107711479,LOC107583967,LOC107725927,LOC107581132 non-coding upstream 69704 1663073 ~ 1663900 (-)
G25127 NA non-coding upstream 72469 1665838 ~ 1666137 (-)
G25133 NA non-coding upstream 94989 1688358 ~ 1688894 (-)
LOC122342802 LOC107711465,LOC107656235 other downstream 5200 1580480 ~ 1586189 (-)
ptprz1b ptprz1,ptprz1b,LOC107725913,LOC107656236,LOC107658935,LOC107581028 other downstream 267992 1289314 ~ 1323397 (-)
G24875 NA other downstream 521293 1069160 ~ 1070096 (-)
pik3cg pik3cg,LOC107658948,LOC107656384,LOC107583938,LOC107705338,LOC107590535,LOC107584052 other downstream 658281 864684 ~ 933108 (-)
slco1c1 slco1c1,LOC107708018,LOC107583931,LOC107658953,LOC107729145,LOC107656392,LOC107590530,LOC108435080 other downstream 1094521 406642 ~ 496868 (-)
selenoo2 selenoo,si:dkey-14d8.2,LOC107579362,LOC107711485 other upstream 915 1594284 ~ 1604690 (-)
zgc:113263 LOC107658878,LOC107583959,LOC107725918,LOC107656382,LOC107711463 other upstream 15991 1609360 ~ 1618298 (-)
ccdc167 ccdc167 other upstream 60222 1653591 ~ 1654826 (-)
rsph9 rsph9,LOC107658900,LOC107583979,LOC107579672,LOC107710090,LOC107656226 other upstream 305034 1898403 ~ 1902663 (-)
cald1a cald1a,LOC107583995,LOC107725991,LOC107658884,LOC107656362,LOC107710121 other upstream 449584 2042953 ~ 2088579 (-)

Expression


Co-expression Network