avpr2l (avpr2l,LOC107725532,LOC107695886,LOC107744926,LOC107590222,LOC107664848,LOC107588672)


Basic Information

Item Value
gene id avpr2l
gene name avpr2l,LOC107725532,LOC107695886,LOC107744926,LOC107590222,LOC107664848,LOC107588672
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 9103576 ~ 9106985 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237065.1
ACTATACAACTAGAATTTACGCTacattatatgtaataaaatatagaatatattatatattatatatatattatttttataacgcgtggtttagtttttaaatgactaatgttaagaaagtgtgttttttaCAATTAGGGTTTTTTCTTTGCTGATTCGTTATTCTGAGGTACACAGGTCAcgtctgtaaaaatattaaaatagctcTGACGCTTATGCTTGAGATGTTTTgactaataaaatacaaaagtacAAGAAGAGGCCTACACTTGAATAGAATATATAGAATTGTGCATCGAGTCGGCTTTATTACAAGTCTTTATTACAAGTAAAGTTATAAAAATTGCTTGAAATAATTCATAGCAAAGAAATCAAGCTCACTAGTCACTTTTAATCCTTTAGTAAAAGCGctatctaaacacacacacataaaaaactgcacaaaaatcacaaaagaatGATGCTTAGAGGCTTGGCTATGCTAGTGACATCAAAACAATTAAAGCTGAATGCTacaatttattatgattattatgacaTGAAATACAGCCCTGTTTGAGGGGTTGGTCATTTGGATGTTTTTCTCTCACTCTTTATTATCAGCCATGTGTATGATGGGCGCTTTTTTGCAGGACAATTAAAAAGCTGACCTAATTTAATCAGTGGGGTTggtaacatataaaaatatgtttgctttttacagtcccgcaatgcattacaaaatacaCGTTAAAAAGGCGCAAACTCCGTCAAAGGAATAGTTTATACATAAAAGTCCATTTACTCGCCCTCGGGTGATCCGGGATACAGAAGAGCTAAATTAAACATGTCACCGATGCTCACTAtctgcagtgaacgggtgccgtcagagcgagagtccaaacatctaaACAatcccaataaaaaaaaaaaacaccactcCGGTTCATCAGTTCTCATCTGAAATATCAGAACAAACACCTGAGGATCCATTAGTGAGCAAGTGGGGCTTAAAGTGAAAAGTTAAAGACAAATTCATGTTAAAACACATCAGTCCTACAGGATAGTTATATTTTCATAGTTAATAATATCCAGAATGCTTAAAACACTATGGGAATGAAATCCCTAGGCTGCTTTAGAGACGCCGGGTCGCCGCTGACCTCAATAAATATGAATCatgtcaaatgtttgttccGCGTAATTGAATGCGCGCCTGAACGCCTGACGTGCGCGAACACAGGTACCGGTGGTCACGTCGAGGTCCTCAGCGCGCCGTGCCGCGTGCGTCAGCGCTCGAGCGCGGCGCTCCAACACCTTTTCACGTAACGCACTAAACAGTCACATCACCTTCCTAAGGTAGCGCCGAACCCGCGATGGCCGATAACCTCAATCGCAGCAGCTGCAACTGCTCCGGCGCGCAGGACGCGTTCGGGCTATCCGAGGGACACTTCGCGCTCGTGAAAGCTGCGGTTCTTGGGTGCATCTTCGTGCTGGCGACGTTTAGCAATTTGTTCCTCCTCCACGCCCTGTGGAAGAGACGGAAAAGACGGACCCGAACTCAGCTGTTCCTTCTGCACCTGTGCCTGGCTGACCTGGTGGTCGCCTTCTTCCAGGTCCTGCCGCAGCTATCCATGGAGATTACGCACCGGTTCAAAGCCTCGGATCTGGTGTGCAGAGCGGTCAAGTACCTCCAGGTGGTCGGGATGTTCGCGTCCACGTACATGATCGTGGCCATGACCGTGGATCGCTACCACGCGGTCTGCAAACCCATGGTGTCCTTCTTCAGAGGGTCTTTCCGCAGGTATGTTGCCATAAGCGCCGCGTGGCTCGTCTCCCTGGCGTTCAGCGCTCCGCAGATGTTCATCTTCTCTCTCCAAGAAGTTGAGAAGAACGTTTTCGACTGCTGGGCGACGTTTATTGAGCCCTGGGGAGGCAGGATATACATAACGTGGATCACCCTGTCCGTGTTTGTCCTGCCAGCCGTGATCCTGATGTATTGTCAGATCAAGATTTGCGCGGGGATCTATTTCAACGTGAAGAGGAAAGCCTCGCAGAGCGGCGCGGGCGATGCGCGCTCTGGCTCTAAAGGGATATCAAGCGCGATGCTGAAGACGGTCAAAATGACTTTTATCATCATCCTGGTGTACACCCTCTGCTGGAGCCCGTTCTTCGTGGTCCAGCTCTGGTCAGCCTGGAGTCCAAGCAGTGCGCCCACGCAGGGGCCGGTGTTTGTCATCATCATGCTCCTCGCCGGTCTTAACAGCTGCACAAACCCATGGATCTACCTGTACTACAGCTAGAACCTCACGGACACTGATCGCCCACCGTCCCTGCTGCTGAAGACGGCACGGTCAAAGC

Function

symbol description
avpr2l Predicted to enable peptide binding activity and vasopressin receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; positive regulation of vasoconstriction; and regulation of systemic arterial blood pressure by vasopressin. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

NR:

description
PREDICTED: [Arg8]-vasotocin receptor-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005000 vasopressin receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237065.1 True 2337 mRNA 0.46 2 9103576 9106985

Neighbor

gene id symbol gene type direction distance location
dnajb9b LOC107725537,LOC107590229,LOC107596855,LOC107664893,LOC107695887,LOC107744927 coding downstream 2854 9097905 ~ 9100722 (-)
spic spic,LOC107695854,LOC107725559,LOC107590981,LOC107596776,LOC107744943,LOC107664892 coding downstream 11470 9089590 ~ 9092106 (-)
spi2 LOC107590970,LOC107695852,LOC107725518,LOC108233215 coding downstream 15215 9086544 ~ 9088361 (-)
mybpc1 mybpc1,LOC107695883 coding downstream 21527 9049521 ~ 9082049 (-)
chpt1 chpt1,LOC107590206,LOC107725616,LOC107695881,LOC107744925,LOC107664854,LOC107588513,LOC107085961 coding downstream 54745 9042013 ~ 9048831 (-)
plxnc1 plxnc1,LOC107664865,LOC107590996,LOC107744945,LOC107695856,LOC107725519 coding upstream 194496 9301481 ~ 9316243 (-)
cradd LOC107590265,LOC107695889,LOC107732998,LOC107553893,LOC107664843 coding upstream 237993 9344978 ~ 9355844 (-)
socs2 socs2,LOC107695891,LOC107590271,LOC107732999,LOC107664864 coding upstream 252183 9359168 ~ 9365799 (-)
LOC122342492 LOC107725531,LOC107695865,LOC107591243,LOC107732966,LOC107553876,LOC105909546 coding upstream 267198 9374183 ~ 9375813 (-)
rint1 rint1,LOC107725664,LOC107733011,LOC107664862,LOC107695894,LOC107553890,LOC107590313 coding upstream 288754 9395739 ~ 9401453 (-)
G27425 NA non-coding downstream 79499 9023877 ~ 9024077 (-)
G27417 NA non-coding downstream 99353 9003923 ~ 9004223 (-)
G27306 LOC107725624,LOC107744919,LOC107590167,LOC107587911,LOC107664885,LOC107695875 non-coding downstream 142143 8960446 ~ 8961433 (-)
G27279 NA non-coding downstream 215623 8887186 ~ 8887953 (-)
G27253 NA non-coding downstream 288564 8809767 ~ 8815012 (-)
LOC122343442 NA non-coding upstream 223022 9330007 ~ 9341739 (-)
G27469 NA non-coding upstream 391731 9498716 ~ 9504000 (-)
G27532 NA non-coding upstream 438223 9545208 ~ 9545421 (-)
LOC122342618 NA non-coding upstream 440654 9547639 ~ 9552161 (-)
G27540 LOC107732962,LOC107553866,LOC107725684,LOC107695899 non-coding upstream 458462 9565447 ~ 9568297 (-)
klhl42 klhl42 other downstream 94272 9004260 ~ 9009304 (-)
LOC122343470 LOC107593478,LOC107664836,LOC107744937,LOC108435459,LOC108279443 other downstream 162173 8892019 ~ 8941403 (-)
th2 pah,th2,LOC107590157,LOC107664872,LOC107587609,LOC107744916,LOC107695848,LOC108437952 other downstream 228978 8870215 ~ 8874598 (-)
slc25a3a slc25a3a,slc25a3,LOC107744906,LOC107586622,LOC108437945,LOC105897470,LOC108279629,LOC107694680,LOC107593070 other downstream 585993 8513630 ~ 8517583 (-)
G27232 LOC107589947,LOC107725677,LOC107659846,LOC107586091,LOC107694692 other downstream 635548 8460506 ~ 8468028 (-)
uhrf1bp1l uhrf1bp1l,LOC107695888,LOC107744929,LOC107664877,LOC107589017 other upstream 164987 9271972 ~ 9300179 (-)
zgc:193726 NA other upstream 1248726 10355711 ~ 10363566 (-)
cacna2d4a cacna2d4a,cacna2d4,LOC107694142,LOC107738821 other upstream 1377937 10484922 ~ 10522249 (-)
dcp1b dcp1b,LOC107590561,LOC107738825,LOC107733007,LOC107589040,LOC107699046,LOC107694173 other upstream 1417546 10524531 ~ 10533543 (-)
ppfia2 ppfia2,LOC107694182,LOC107755902,LOC107680027 other upstream 2307735 11414720 ~ 11573766 (-)

Expression


Co-expression Network