mcm10 (mcm10,LOC107658860,LOC107726070,LOC107743741,LOC107656326)


Basic Information

Item Value
gene id mcm10
gene name mcm10,LOC107658860,LOC107726070,LOC107743741,LOC107656326
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 2927805 ~ 2934976 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237073.1
tttataatttacatttaatgtaaagaATAAAGCAACCAATATAGTAAATTATACACGTATAAACAAttgattataaatattatgtgtatttatattttcgACAAATATGTAGTAGTTTATAACAACtaatgattcattattttagatcgaaatttaatttttgtaagtGTATCAAAGCAAAATCGAAATAGAATTAACCTTTAAATCTTTTATCTAGGACGCATCAGGAAGATGTGTTTTATTCTTGACTGGAACAAATTAAGCGTGAAAGTTTTTTTTGCGATAGACCAGACCTAAAACCTGAATGCAATatagattaattaatttattgttttttttttattttcgtttTTAACTAAAGCTTCGGCAACTTTTTGTACAACTGTACCAACTAGCTTTGTGTAAAGCACGGTTATTTTGTTACGGACAGGCACGAAGCTCTCCCGGTAAAGTGACGTAGTTCCGGGGtcctgaatattaaaaaaatttcgcGCCAACGTTGAAACGGCAGCTTTCGCGATCCACCACGGAGACATTTAAtcgttttctctttaaaaacaaagcgaATAAAACCGACCGAAATCAAAATGGCAGAGGAGGAGAATCTGGACATGTTGCTGTCTCTGTTTGCGGAGAGTGAGAGTCAGGAACTGGAGACTACCGCCGCTGGAGAGGGCAGTGATGATCTAGATGACCTGTTCGATGACGATGGTGAGGACGACCCCTATATTGAgccagaggaagaggaagaagacgTGGCACCTGGGAAATCCAGCTCAGCTGAAGGGGACAGTGACTTAAATAAGTCCAATGAAGATCTGCAGGCGGAGCTTAAATTAATGCAGCAGAAGATGCAAAAACTACAGCAGCAGCTGGAGTCCTCGCAGGGAAGAACACGGCCTGAAAACAAACCCTCCGCCCAGAGACAGACGAGCACTAAATCCTTAGCTTTTCAGGGAGGGTCAAAAACTCCCCCAACGAAACCACGGGACAGCAATGGCTCCCCTCCGTCAGATGTAACCTCAAAGCTGAAAAGcaagcagaggatggcccaCCAAGCCAAAACAGCTGCCTCAGAACAGCACGCTCCTGTTGGCCAGAGTATGAACAACTGCCAGTCTCGGCCAATAAGAGACAGCGCGAAAGTAAATAGCACTTTAAAGTCACCGCCCCCTCTCAAGACTCCTCCTACTGTGCGGCAGGCCACGCCTCGCTCATCAATCAGTCAAGAGGTTGCTGTGGAGAAGTTCTCGGGTCTCAGACTCAGGAATCCACGTCTGTCTTCCATAGACATTGAGCAAAAAATGTCCAGCCGCAGATTGATCAAGCTCTCTCAGCTGCCTGATCGCCTGGCCAGGGACAATTTAGAGGACAGTGACTGGGTCACCTTTGCAGTGGTGATAAATAAAATCACCCCACAGAGCAAAAACAATggaAAAACCTTCAGCATTTGGAAGCTGAATGATCTTCATAACCTGGAGGTGAATGTGTCTCTCTTCCTGTTCGGGTCCGTTCACACAGATCTATGGAAGACTGACACTGGGACAGTGATCGGCATCCTCAATCCCAATCCAATGAAGAACAAGGATGGTTCTAGTGAGgTCTGCTTGACAGTGGATCACCCACAGAAGGTCCTTATAGTGGGGGAAGCCATGGACTTCGGCACTTGCAAAGCTAAAAAGAAGAACGGAGACTCTTGCACTCAGCTCGTCAACTTGTATGAATGCCAGTACTGCCAGTATCATGTTAAAGCCCAGTACAAGAAAATGAGCTCGAAGAGATCGGAGCTTCAGTCCAGCTTCACAGGCTCCGCCCCTGGCAAAGGAAGGGGGCGGGGCGGTTTGAGGGAGCGCCTGTGCCAATCTGATTTCCACTACGGGGGCATGTCCTCGCTCGCCTGTGCGCCCTCAATgtctGCCCCACAGCCAAAGAAACAACCCACTATACAGTCTGTTTTGGCATCCATCCCAACTAAAAAACTTGTTCTGAATTCAGGTGACGTGTCAGGCTGTTCGGATGACTTCAAAGGCCTGATGTCTATGCCGACGCCTGGAGcgcttaatattaagaaacacTTAGGACAAGCCAAGAACACGGcagTTGCGGGATCTTCAGTTCAGTCTATATCTGCATCTGACCTTCTGAAGCAGCAGAAAGAACAGCACCAGCAAAGAATGCTGGCTCGAAAGAAGAGGGCAGAAGAGATTCAGAAGAGGGTGCTCCAGAGAAGCGCTCCTTCCCAGCCGAATGTAAACAGGGGTCCTTTGCTCTCCCCGAAAGCAGCCTCGGAGGTTCCTAGAGGGTCTCCTGGCCTCACGTCCCGTCTCTCAGGCCCTCCTGTGCCCACACTGGGCCGAGGCTTTTCAGAAGGAGAGGACATCCTTCTGGATCTGTCTCCACCCTTATCAAAGGGCCTCTCAGCAGCAAAGtTGGCGGCAGTGAGGAAACTCCAAGCTAAAGGCTCGGTGATCGTAAAAGACGACCCGAATGCTGTAAAACGCAAGCGAGCCAAGAGCGACGAGATCGAAGATCGAGTGGAGCGAAATCTCACCGCACCTAAAGTATCTGATGAAAATCCAACCGGTGAAGAGGAAGAGCCAGCTCAGAAAAAGAGGCGGGAACGGCTAGAGTACATCCAGTCGGAGGAGTTTCAGCGCATCCTCAACGCCAAGTCCTCAAACTCGTGGATGATGGGAGAGATTGAGGAGCGGGCCATGCAGGAGTATTTTGAGCCTCTGgtgcaaaaagaaaagatggAGGAGAAGATGAAGGGCATCAGGGAGATGAAGTGTCGAGCCGTCACCTGCAAAGCCTGTAAATACACCCACTTTAAACCGGCGGACCGCTGTGTGGAAGAGAAACACGATTACCATTGGCACGATGCCGTCAAACGCTTCTTCAAATGCCCCTGCGGTCAGAGAAAGATCTGCCTGGCACGGATGCCACATGGAGCCTGCAGCCATTGCGGCCTTTTTAAGTGGGAGAGAGATTGCATGTTAAAGGAGAAGAAGGGACCCAAAATAGGAGGGGAGCTACTGTTGCCACGCGGAGAGGAACAGGCCAAATTCCTCAACAGTTTAAAGTAGAGTCAGCCTTCCCGTGTGAGGCCTGAGCCCAGTCTCTCACAGAAGAGGAGGCTTCGCTGTCTTCACAATCACAAAGTGAGAGCGAAGGGCCGTCAGCATTCCGCTTGTGCCGGTCAATGTTATATCTGATTTTACCGTCTGTTTATGTTGTTTTCAAAAGCTGCCAagcctttttaaatgtaaatattcgtTATTATTTTAATCGTGAACTTTTATATCAACCACGTCCAGCACACCTGAATTAAACGATACCGTGTTTTATAGA
>XM_043237074.1
tttataatttacatttaatgtaaagaATAAAGCAACCAATATAGTAAATTATACACGTATAAACAAttgattataaatattatgtgtatttatattttcgACAAATATGTAGTAGTTTATAACAACtaatgattcattattttagatcgaaatttaatttttgtaagtGTATCAAAGCAAAATCGAAATAGAATTAACCTTTAAATCTTTTATCTAGGACGCATCAGGAAGATGTGTTTTATTCTTGACTGGAACAAATTAAGCGTGAAAGTTTTTTTTGCGATAGACCAGACCTAAAACCTGAATGCAATatagattaattaatttattgttttttttttattttcgtttTTAACTAAAGCTTCGGCAACTTTTTGTACAACTGTACCAACTAGCTTTGTGTAAAGCACGGTTATTTTGTTACGGACAGGCACGAAGCTCTCCCGGTAAAGTGACGTAGTTCCGGGGtcctgaatattaaaaaaatttcgcGCCAACGTTGAAACGGCAGCTTTCGCGATCCACCACGGAGACATTTAAtcgttttctctttaaaaacaaagcgaATAAAACCGACCGAAATCAAAATGGCAGAGGAGGAGAATCTGGACATGTTGCTGTCTCTGTTTGCGGAGAGTGAGAGTCAGGAACTGGAGACTACCGCCGCTGGAGAGGGCAGTGATGATCTAGATGACCTGTTCGATGACGATGGTGAGGACGACCCCTATATTGAgccagaggaagaggaagaagacgTGGCACCTGGGAAATCCAGCTCAGCTGAAGGGGACAGTGACTTAAATAAGTCCAATGAAGATCTGCAGGCGGAGCTTAAATTAATGCAGCAGAAGATGCAAAAACTACAGCAGCAGCTGGAGTCCTCGCAGGGAAGAACACGGCCTGAAAACAAACCCTCCGCCCAGAGACAGACGAGCACTAAATCCTTAGCTTTTCAGGGAGGGTCAAAAACTCCCCCAACGAAACCACGGGACAGCAATGGCTCCCCTCCGTCAGATGTAACCTCAAAGCTGAAAAGcaagcagaggatggcccaCCAAGCCAAAACAGCTGCCTCAGAACAGCACGCTCCTGTTGGCCAGAGTATGAACAACTGCCAGTCTCGGCCAATAAGAGACAGCGCGAAAGTAAATAGCACTTTAAAGTCACCGCCCCCTCTCAAGACTCCTCCTACTGTGCGGCAGGCCACGCCTCGCTCATCAATCAGTCAAGAGGTTGCTGTGGAGAAGTTCTCGGGTCTCAGACTCAGGAATCCACGTCTGTCTTCCATAGACATTGAGCAAAAAATGTCCAGCCGCAGATTGATCAAGCTCTCTCAGCTGCCTGATCGCCTGGCCAGGGACAATTTAGAGGACAGTGACTGGGTCACCTTTGCAGTGGTGATAAATAAAATCACCCCACAGAGCAAAAACAATggaAAAACCTTCAGCATTTGGAAGCTGAATGATCTTCATAACCTGGAGGTGAATGTGTCTCTCTTCCTGTTCGGGTCCGTTCACACAGATCTATGGAAGACTGACACTGGGACAGTGATCGGCATCCTCAATCCCAATCCAATGAAGAACAAGGATGGTTCTAGTGAGgTCTGCTTGACAGTGGATCACCCACAGAAGGTCCTTATAGTGGGGGAAGCCATGGACTTCGGCACTTGCAAAGCTAAAAAGAAGAACGGAGACTCTTGCACTCAGCTCGTCAACTTGTATGAATGCCAGTACTGCCAGTATCATGTTAAAGCCCAGTACAAGAAAATGAGCTCGAAGAGATCGGAGCTTCAGTCCAGCTTCACAGGCTCCGCCCCTGGCAAAGGAAGGGGGCGGGGCGGTTTGAGGGAGCGCCTGTGCCAATCTGATTTCCACTACGGGGGCATGTCCTCGCTCGCCTGTGCGCCCTCAATgtctGCCCCACAGCCAAAGAAACAACCCACTATACAGTCTGTTTTGGCATCCATCCCAACTAAAAAACTTGTTCTGAATTCAGGTGACGTGTCAGGCTGTTCGGATGACTTCAAAGGCCTGATGTCTATGCCGACGCCTGGAGcgcttaatattaagaaacacTTAGGACAAGCCAAGAACACGGTTGCGGGATCTTCAGTTCAGTCTATATCTGCATCTGACCTTCTGAAGCAGCAGAAAGAACAGCACCAGCAAAGAATGCTGGCTCGAAAGAAGAGGGCAGAAGAGATTCAGAAGAGGGTGCTCCAGAGAAGCGCTCCTTCCCAGCCGAATGTAAACAGGGGTCCTTTGCTCTCCCCGAAAGCAGCCTCGGAGGTTCCTAGAGGGTCTCCTGGCCTCACGTCCCGTCTCTCAGGCCCTCCTGTGCCCACACTGGGCCGAGGCTTTTCAGAAGGAGAGGACATCCTTCTGGATCTGTCTCCACCCTTATCAAAGGGCCTCTCAGCAGCAAAGtTGGCGGCAGTGAGGAAACTCCAAGCTAAAGGCTCGGTGATCGTAAAAGACGACCCGAATGCTGTAAAACGCAAGCGAGCCAAGAGCGACGAGATCGAAGATCGAGTGGAGCGAAATCTCACCGCACCTAAAGTATCTGATGAAAATCCAACCGGTGAAGAGGAAGAGCCAGCTCAGAAAAAGAGGCGGGAACGGCTAGAGTACATCCAGTCGGAGGAGTTTCAGCGCATCCTCAACGCCAAGTCCTCAAACTCGTGGATGATGGGAGAGATTGAGGAGCGGGCCATGCAGGAGTATTTTGAGCCTCTGgtgcaaaaagaaaagatggAGGAGAAGATGAAGGGCATCAGGGAGATGAAGTGTCGAGCCGTCACCTGCAAAGCCTGTAAATACACCCACTTTAAACCGGCGGACCGCTGTGTGGAAGAGAAACACGATTACCATTGGCACGATGCCGTCAAACGCTTCTTCAAATGCCCCTGCGGTCAGAGAAAGATCTGCCTGGCACGGATGCCACATGGAGCCTGCAGCCATTGCGGCCTTTTTAAGTGGGAGAGAGATTGCATGTTAAAGGAGAAGAAGGGACCCAAAATAGGAGGGGAGCTACTGTTGCCACGCGGAGAGGAACAGGCCAAATTCCTCAACAGTTTAAAGTAGAGTCAGCCTTCCCGTGTGAGGCCTGAGCCCAGTCTCTCACAGAAGAGGAGGCTTCGCTGTCTTCACAATCACAAAGTGAGAGCGAAGGGCCGTCAGCATTCCGCTTGTGCCGGTCAATGTTATATCTGATTTTACCGTCTGTTTATGTTGTTTTCAAAAGCTGCCAagcctttttaaatgtaaatattcgtTATTATTTTAATCGTGAACTTTTATATCAACCACGTCCAGCACACCTGAATTAAACGATACCGTGTTTTATAGA

Function

symbol description
mcm10 Predicted to enable DNA replication origin binding activity and single-stranded DNA binding activity. Predicted to be involved in DNA replication initiation. Predicted to act upstream of or within DNA replication and cellular response to DNA damage stimulus. Predicted to be located in nucleus. Predicted to be part of replication fork protection complex. Human ortholog(s) of this gene implicated in primary immunodeficiency disease. Orthologous to human MCM10 (minichromosome maintenance 10 replication initiation factor).

NR:

description
protein MCM10 homolog

GO:

id name namespace
GO:0006260 DNA replication biological_process
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003677 DNA binding molecular_function

KEGG:

id description
K10736 MCM10; minichromosome maintenance protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237073.1 True 3351 mRNA 0.47 18 2927805 2934976
XM_043237074.1 False 3348 mRNA 0.47 18 2927805 2934976

Neighbor

gene id symbol gene type direction distance location
cdk17 cdk17,LOC107658862,LOC107656329 coding downstream 23516 2863140 ~ 2904289 (-)
lta4h lta4h,LOC107658863,LOC107656327,LOC107744078 coding downstream 82800 2835848 ~ 2845005 (-)
tfec LOC107584009,LOC107725982,LOC107658865,LOC107710111,LOC107580185,LOC107656331 coding downstream 104658 2783461 ~ 2823147 (-)
ppp1r3aa LOC107658872,LOC107584007,LOC107726069 coding downstream 423592 2499774 ~ 2504213 (-)
gpr85 gpr85,LOC107580073,LOC107710116,LOC107726048,LOC107658873,LOC107584006 coding downstream 456533 2467087 ~ 2471272 (-)
nudt5 nudt5,LOC107658859,LOC107656337,LOC107726016,LOC107743836 coding upstream 131 2935107 ~ 2938017 (-)
si:ch211-240l19.8 LOC107658767,LOC107725963 coding upstream 77790 3012766 ~ 3013359 (-)
LOC122343283 NA coding upstream 82656 3017632 ~ 3018211 (-)
LOC122343240 NA coding upstream 89272 3024248 ~ 3024825 (-)
wnk1b wnk1,LOC107725976,LOC107658853 coding upstream 92095 3027071 ~ 3094405 (-)
LOC122343423 NA non-coding downstream 389799 2534205 ~ 2538006 (-)
LOC122343417 NA non-coding downstream 638686 2203585 ~ 2289119 (-)
G25362 NA non-coding downstream 644027 2283285 ~ 2283778 (-)
LOC122343454 NA non-coding downstream 745136 2167305 ~ 2182669 (-)
G25299 LOC108267243 non-coding downstream 764097 2163426 ~ 2163708 (-)
G25625 NA non-coding upstream 45183 2980159 ~ 2996458 (-)
LOC122342459 NA non-coding upstream 181428 3116404 ~ 3117297 (-)
LOC122342458 NA non-coding upstream 182503 3117479 ~ 3119550 (-)
G25673 wnt5b,LOC107656325,LOC103026771,LOC107580320,LOC107744029,LOC107726030 non-coding upstream 445682 3380658 ~ 3676399 (-)
LOC122342758 NA non-coding upstream 467848 3402824 ~ 3403502 (-)
LOC122342907 NA other downstream 454737 2472284 ~ 2473068 (-)
dock4b dock4b,LOC107656358,LOC108425388 other downstream 552089 2299635 ~ 2375716 (-)
tnni4a zgc:101560,LOC107725970,LOC107584059,LOC107658770,LOC107656258,LOC107581287 other downstream 830004 2091351 ~ 2097801 (-)
cald1a cald1a,LOC107583995,LOC107725991,LOC107658884,LOC107656362,LOC107710121 other downstream 839226 2042953 ~ 2088579 (-)
rsph9 rsph9,LOC107658900,LOC107583979,LOC107579672,LOC107710090,LOC107656226 other downstream 1025142 1898403 ~ 1902663 (-)
ccdc3a ccdc3,ccdc3a,LOC107725961,LOC107658768,LOC107580337,LOC107744050 other upstream 64906 2999882 ~ 3012214 (-)
LOC122342805 NA other upstream 84116 3019092 ~ 3021512 (-)
LOC122342819 foxp2,foxp4,LOC107725896,LOC107728618,LOC107656011,LOC107675840 other upstream 599686 3534662 ~ 3577123 (-)
LOC122342822 tmem9b,LOC107674442,LOC107750540,LOC107754675,LOC107585953,LOC107700603,LOC107593285 other upstream 666024 3601000 ~ 3601991 (-)
LOC122342823 scube2,LOC107750541,LOC107585952,LOC107674429,LOC107593229,LOC107700597 other upstream 667380 3602356 ~ 3618367 (-)

Expression


Co-expression Network