nudt5 (nudt5,LOC107658859,LOC107656337,LOC107726016,LOC107743836)


Basic Information

Item Value
gene id nudt5
gene name nudt5,LOC107658859,LOC107656337,LOC107726016,LOC107743836
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 2935107 ~ 2938017 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237076.1
AAGCCGATGCGCCGCACGAGGGGAGGAACTGTTTTAGCGGCACACATGTAGGCAGATACGGAACATGTGACTAATTGGAAGAAAACTAACTAAACTGGACAGATCACTTGTGACTTTTTTGACGTACATAACGATTTCTCAGAATTACTGTAGCTGTCCCAGAGCTTCCTTCACTGATCGCCTGCACAACATGAGCTCTCCGAAGAAAGAGACTACTGAACCTCATGTCATCAAAGAGGAGCTGATAGCGAGTGGAAAATGGGTGAAGCTTGAGAAGACCACATATGTGGATCCCTCTGGAAGCACCAGAACTTGGGAAACGGCGAAGAGAACAACCCGAGTGGCCAACAGCGCAGCCGACGGCGTAGGGATCATAGCCCTTCTGAAGAGGACTCTGCATAAAGACTGCGTTGTAATGGTGAAGCAGTTTCGACCACCCATGGGATGCGTCGCGCTGGAGTTTCCCGCAGGTCTGATAGATGACAACGAGAGCGTGGAAGCCGCTGCTTTGAGGGAGCTAAAGGAGGAAACGGGTTACAAAGGGGAGGTGGTGGGCGTCACTCCAGTCACGTGTTTAGACCCGGGCCTGTCTAACTGCACCACACAGATGGTGATGGTAAACATCAACGGAGATGACCTCGAAAATATAAACCCCACTCAGCAGCTGGGCGATGGAGAATTTGTGGAGGTTATCCTTTTACCTCTGGATGAATTTCAGCACAAAATTGACGaGCTGctgcagaaagagaaaatagCGGTGGACTCCAAGGTGTATATTTATGCTATGGGGATGTCGCAGGCCTTCTTTAAGCCCAGAGAGCTGCCTGTGCTGAAGCAGTGAGATCAGATCTCTCACCTGGAATACACTAAAGACAGCTACCGTGAGCTGATGAAATCTACCAATACTTGACCATGGCCTTAGTGTTTGGCATCGGTTGCCTGAACATTCCTAATAAACTAACTAAGTGCTTAATTAAGAGGTATTCGGAGTTTGCACAGTcttaaaattaatcattaaatatagGAATATATAGAAACTGACCAAACTAAAAAGTGCAGGTCTATTCTGTTAACCTTTTGAGTATGCCCTGTTTAATGTTGACctgtaatgacaaaaaaaaaaaaaaatccttgaaaagataataagcataaaatatttataggtCAAAACACTAGGTGTCACGCGAAGAAAGGACGTATGACAGTATTATGATCAGGACTTGGAATAAATCTCTCAAAAGGGTATTTTTGATGTATGTTTACTGCGATACGCAGGTAATTCTTGAACTTTAGTTTATGCTGGACGATGCATGAGCAACGCTGTGTTCCTGTATAACTATGAATTTTTATCTAATAAATTTgatagtttacatttttgca
>XM_043237077.1
ACAAGCCGATGCGCCGCACGAGGGGAGGAACTGTTTTAGCGGCACACATGTAGGCAGATACGGAACATGTGACTAATTGGAAGAAAACTAACTAAACTGGACAGATCACTTGTGACTTTTTTGACGTACATAACGATTTCTCAGAATTACTGTAGCTGTCCCAGAGCTTCCTTCACTGATCGCCTGCACAACATGAGCTCTCCGAAGAAAGAGACTACTGAACCTCATGTCATCAAAGAGGAGCTGATAGCGAGTGGAAAATGGGTGAAGCTTGAGAAGACCACATATGTGGATCCCTCTGGAAGCACCAGAACTTGGGAAACGGCGAAGAGAACAACCCGAGTGGCCAACAGCGCAGCCGACGGCGTAGGGATCATAGCCCTTCTGAAGAGGACTCTGCATAAAGACTGCGTTGTAATGGTGAAGCAGTTTCGACCACCCATGGGATGCGTCGCGCTGGAGTTTCCCGCAGGTCTGATAGATGACAACGAGAGCGTGGAAGCCGCTGCTTTGAGGGAGCTAAAGGAGGAAACGGGTTACAAAGGGGAGGTGGTGGGCGTCACTCCAGTCACGTGTTTAGACCCGGGCCTGTCTAACTGCACCACACAGATGGTGATGGTAAACATCAACGGAGATGACCTCGAAAATATAAACCCCACTCAGCAGCTGGGCGATGGAGAATTTGTGGAGGTTATCCTTTTACCTCTGGATGAATTTCAGCACAAAATTGACGaaagagaaaatagCGGTGGACTCCAAGGTGTATATTTATGCTATGGGGATGTCGCAGGCCTTCTTTAAGCCCAGAGAGCTGCCTGTGCTGAAGCAGTGAGATCAGATCTCTCACCTGGAATACACTAAAGACAGCTACCGTGAGCTGATGAAATCTACCAATACTTGACCATGGCCTTAGTGTTTGGCATCGGTTGCCTGAACATTCCTAATAAACTAACTAAGTGCTTAATTAAGAGGTATTCGGAGTTTGCACAGTcttaaaattaatcattaaatatagGAATATATAGAAACTGACCAAACTAAAAAGTGCAGGTCTATTCTGTTAACCTTTTGAGTATGCCCTGTTTAATGTTGACctgtaatgacaaaaaaaaaaaaaaatccttgaaaagataataagcataaaatatttataggtCAAAACACTAGGTGTCACGCGAAGAAAGGACGTATGACAGTATTATGATCAGGACTTGGAATAAATCTCTCAAAAGGGTATTTTTGATGTATGTTTACTGCGATACGCAGGTAATTCTTGAACTTTAGTTTATGCTGGACGATGCATGAGCAACGCTGTGTTCCTGTATAACTATGAATTTTTATCTAATAAATTTgatagtttacatttttgca

Function

symbol description
nudt5 Predicted to enable ADP-ribose diphosphatase activity. Predicted to be involved in nucleoside phosphate metabolic process and ribose phosphate metabolic process. Predicted to be active in nucleus. Orthologous to human NUDT5 (nudix hydrolase 5).

NR:

description
PREDICTED: ADP-sugar pyrophosphatase

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0045134 uridine-diphosphatase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0019144 ADP-sugar diphosphatase activity molecular_function

KEGG:

id description
K13987 NUDT5; ADP-sugar pyrophosphatase / 8-oxo-dGDP phosphatase / ADP-D-ribose pyrophosphorylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237076.1 True 1380 mRNA 0.44 10 2935107 2938015
XM_043237077.1 False 1371 mRNA 0.44 10 2935107 2938017

Neighbor

gene id symbol gene type direction distance location
mcm10 mcm10,LOC107658860,LOC107726070,LOC107743741,LOC107656326 coding downstream 131 2927805 ~ 2934976 (-)
cdk17 cdk17,LOC107658862,LOC107656329 coding downstream 30818 2863140 ~ 2904289 (-)
lta4h lta4h,LOC107658863,LOC107656327,LOC107744078 coding downstream 90102 2835848 ~ 2845005 (-)
tfec LOC107584009,LOC107725982,LOC107658865,LOC107710111,LOC107580185,LOC107656331 coding downstream 111960 2783461 ~ 2823147 (-)
ppp1r3aa LOC107658872,LOC107584007,LOC107726069 coding downstream 430894 2499774 ~ 2504213 (-)
si:ch211-240l19.8 LOC107658767,LOC107725963 coding upstream 74749 3012766 ~ 3013359 (-)
LOC122343283 NA coding upstream 79615 3017632 ~ 3018211 (-)
LOC122343240 NA coding upstream 86231 3024248 ~ 3024825 (-)
wnk1b wnk1,LOC107725976,LOC107658853 coding upstream 89054 3027071 ~ 3094405 (-)
LOC122342759 fbxl14b,fbxl14,LOC107580311,LOC107656333,LOC108279751 coding upstream 416352 3354369 ~ 3356141 (-)
LOC122343423 NA non-coding downstream 397101 2534205 ~ 2538006 (-)
LOC122343417 NA non-coding downstream 645988 2203585 ~ 2289119 (-)
G25362 NA non-coding downstream 651329 2283285 ~ 2283778 (-)
LOC122343454 NA non-coding downstream 752438 2167305 ~ 2182669 (-)
G25299 LOC108267243 non-coding downstream 771399 2163426 ~ 2163708 (-)
G25625 NA non-coding upstream 42142 2980159 ~ 2996458 (-)
LOC122342459 NA non-coding upstream 178387 3116404 ~ 3117297 (-)
LOC122342458 NA non-coding upstream 179462 3117479 ~ 3119550 (-)
G25673 wnt5b,LOC107656325,LOC103026771,LOC107580320,LOC107744029,LOC107726030 non-coding upstream 442641 3380658 ~ 3676399 (-)
LOC122342758 NA non-coding upstream 464807 3402824 ~ 3403502 (-)
LOC122342907 NA other downstream 462039 2472284 ~ 2473068 (-)
dock4b dock4b,LOC107656358,LOC108425388 other downstream 559391 2299635 ~ 2375716 (-)
tnni4a zgc:101560,LOC107725970,LOC107584059,LOC107658770,LOC107656258,LOC107581287 other downstream 837306 2091351 ~ 2097801 (-)
cald1a cald1a,LOC107583995,LOC107725991,LOC107658884,LOC107656362,LOC107710121 other downstream 846528 2042953 ~ 2088579 (-)
rsph9 rsph9,LOC107658900,LOC107583979,LOC107579672,LOC107710090,LOC107656226 other downstream 1032444 1898403 ~ 1902663 (-)
ccdc3a ccdc3,ccdc3a,LOC107725961,LOC107658768,LOC107580337,LOC107744050 other upstream 61865 2999882 ~ 3012214 (-)
LOC122342805 NA other upstream 81075 3019092 ~ 3021512 (-)
LOC122342819 foxp2,foxp4,LOC107725896,LOC107728618,LOC107656011,LOC107675840 other upstream 596645 3534662 ~ 3577123 (-)
LOC122342822 tmem9b,LOC107674442,LOC107750540,LOC107754675,LOC107585953,LOC107700603,LOC107593285 other upstream 662983 3601000 ~ 3601991 (-)
LOC122342823 scube2,LOC107750541,LOC107585952,LOC107674429,LOC107593229,LOC107700597 other upstream 664339 3602356 ~ 3618367 (-)

Expression


Co-expression Network