tmem168a (tmem168a,LOC107658875,LOC107726047,LOC107710117,LOC107656353)


Basic Information

Item Value
gene id tmem168a
gene name tmem168a,LOC107658875,LOC107726047,LOC107710117,LOC107656353
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 2415666 ~ 2423463 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237098.1
gattttttttttacttcgcCTTTGACCCGTCTGTGGTGCCGTAGTTCGGAGTGCGGAAGCATCATGGACATCGGGAAGCTAAAAACTCGTTGTCATACACAAATTGGAATGTAGCAACACTATCTTTCCTAGTCTTGGAGGAGTCAGGCCTAATCCTCTGTGATTATACCCAAAAATGTCAGGCCAAGAGGAATCAGACAAGGGTGTGGACATGTGGTCCTCCCTTCGCTGTCTGGGGTATCTCTCCAGCTTCAATTTGCTGCTCGCCGTGTGCCTGGGAATGTACGTACGATGGGAACAGACTGCAGAACCCATGATTCTGGTCATCTTCATCTTGGGTTTGTTCGTATCAGCCATAGCCTGTATCCTCTACTACTACTTTTCGATGGAGTCGGCCAGTTTAAGCCTCTTCCACCTGTGGTTCGGCTTCCTGCAGGGACTCCTGTGCTTCCTGAACAGCCCGTCTCTGGAGAACAACATAAAGGAGCAGGTCACAAACTACCTGTTGCTGGGAAGCGTGGCTGTTCGGACGCTTTGGGCCTTAACAGAGCGTCTCTGTGGTAACGCTAAGTATAAACCAGTCGTTATCACCTCATCCGAGCTTCTAGAGCTCCTGGGATTTGGCGTCGCAAGCATCAGCTTGGTTTTCCACAAATCGCTGGCCATGATTGCTCTGACGTTATCGTTAACGGCCCTCATCGTGGACCTTCGCATGAAGTCGCCCTTGGCTCTCCCTAATCTAGCCTGCTTTGCTGTGATCACAGCCGTTACCTTTTTCCAGGCCTTGGAGATCCAAGCAAACCCTTTCGCGCTCAGCTGCTACCTGGGGCGGCTTATCTGCGAGCCTCTTCTGGACGTGTACTTCAGCAGCTTGACGGCGACAGAACGCTGGAAGCAGTTTCTCTCAGCCGGTCGTCTGTGGAGGAGATTTTCTCTGTTCCCGCTGGCATTCGTCGAGCTGTCGTTCTTTGTGGTCTGTGCCTTGAAGCTGGGTAACCTGAAAGTTTGGTACCTGGTCATCCCTGGCTTCTGCGTCTTTGGCCTTTTGTGGATCCTGTGCCACATGGTCTTCCTCGTCACGCTATGGTGCTTCCACACCAAGCTAAGCGAGAGTCAGAAGACGTGGGCGGCCCAGCGCTCGCAAACGCTCAATTTGGACAGGATCATGGCCTCCAGGGGCATGCGTCATTTCTGTCTCATCTCCGAACGGCTGGTGCTCTTCTGCCTGATGTCCACCATCATACTAGGGGCCGTCTCATGGCAGGTCACTAATGGACTCTTtatgagtgtgtttctagtgGTACTGCCACTGGAGTCTCTGGCTCATGGACTCTTCCATGAACTGGGAAACTGCTTGGGAGGCACCTGCATTGGATATGCAGTGGTAATTCCCACTTGCTACAGCAgCGCAGACGGACAGCCATTGCTGTTGCCTCCAGGGCAAGCGCAGGAATTGCACTCCACAGCTACTCTGAACGCTGTACAGCGACTCTTCTCCTACCACCTCATTCAGACCTTTGGATGTGACTACTCCACCAGTCTAAGCCTGGACACCCTGCAGGCCAAACTGCGCTCTTTTCTAGAGCTCTGCACCACAGAAGGCCCGCGGCATGACACCTACATCCTGTACTACAGTGGCCACACACTTCCCAGCGGAGACTGGACTCTGGCAGGTGGCGATTGCTTGCGTCTGCAGCAGATCCTTGATATGTGGAAGGAACGGAACGCCAGCTTCTCTTCCCGCCTCATTCTGGTCCTGGACACTGAGAATTCTGCGACGTGGGTAAAGGCGGTGCGAAAGGTGGAAAAGATGTATGTAGCAGTACAAGGAGCCAAGATGAGCCCTGTACAGGATGCTGAAGCCCAGGAAGCCCCTCGATTGGGAGACTTCACCGCTGAGTGGGTGAAATACAACTGCGATCCTGACAGTGGCATACAGTGGTCCGAGAGGGGTCGGGTCATCTCCGCTATATATGGCGTGTCTAAACCCTGGAGTGACTATGCTCTCCACCTGCCCACCGGAAGCGATGTAGCCAAGCACTGGAAAACACACTTCCCCAAGGCCACATACCCACTGGTGGCTGTAGCGAACTGGTGCTGTGGACTTAACCTTCTTTGGCTATGTAGTGTGTGCTTGCGCTGCGTCAGGAGACTGAAACTTTCTTGGTTCCCTCCCAGTATACTAGATACAGGGCAAGGGATTAAACTAGTCCGATCATAGGCGACCAGTTGGTTTGCTTCTATACAAGGTACATATATCACAATTTATCTTTTCTATGCAATTTGTGGGATATCATTTTTTGACCGTTCAGATGCCTTTAACATATTACTTTACTCAGTTATAGATGGGAAACGTGGATCGCTCAGTCTTGCTTCTAAAGATCTACTTTCCTCTAGAGTTTAGAGTCACATCTAATTTTTTAAATCCCATAAATTTAAACCCCAAAAGACTTTCGATTggaatattaagaaatattaatactttagGAAGTAGGTTGATCTTTAGGAACAGGATTGAGCCCCATTGCTATATGAAAGTTTCTTCAGTTTATCTATGTGccatatatacagaatatagcCACTGTCTTATCTCATAAACAGCATTAAGGACTGTTAACGTCATGTGGCTggtgttaatttattaatttttaaaagggTTTTCCCGTGATTTGggtaaaatgtttattgcaatGTATTCGGTCTCAGGCAAAGTCGGGCAAGAAATCAAATTGTATCTTTTAAAAGGTTACTTTTTTTTGACAAGCAGTAGAGCGGGGTTGGTTTAGTTGTTTTTCCAAGACCTCTACAAAAGCCATTGTTTAAACCATATTGTgccatattttgtattttctgtagGGTTTTTGTGTTGAAGAGTTGACTTCATTAATTCTTTTTCAACAGATCAGTGTCCttaaataaagactttaaaatta

Function

symbol description
tmem168a Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM168 (transmembrane protein 168).

NR:

description
transmembrane protein 168-A-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237098.1 True 2933 mRNA 0.48 5 2415666 2423463

Neighbor

gene id symbol gene type direction distance location
tnnt2e tnnt2e,LOC107658902,LOC107725993,LOC107656364,LOC107710083,LOC108425385 coding downstream 372805 2032823 ~ 2042861 (-)
arl1 arl1,LOC107576237 coding downstream 391457 2022325 ~ 2024209 (-)
slc5a8 LOC107710085 coding downstream 415591 1995442 ~ 2000075 (-)
foxm1 LOC107658881,LOC107710101,LOC107656265 coding downstream 430608 1979107 ~ 1985058 (-)
pgm3 pgm3,LOC107579473,LOC107656266,LOC107658887 coding downstream 443256 1965852 ~ 1972410 (-)
gpr85 gpr85,LOC107580073,LOC107710116,LOC107726048,LOC107658873,LOC107584006 coding upstream 43624 2467087 ~ 2471272 (-)
ppp1r3aa LOC107658872,LOC107584007,LOC107726069 coding upstream 76311 2499774 ~ 2504213 (-)
tfec LOC107584009,LOC107725982,LOC107658865,LOC107710111,LOC107580185,LOC107656331 coding upstream 359998 2783461 ~ 2823147 (-)
lta4h lta4h,LOC107658863,LOC107656327,LOC107744078 coding upstream 412385 2835848 ~ 2845005 (-)
cdk17 cdk17,LOC107658862,LOC107656329 coding upstream 439677 2863140 ~ 2904289 (-)
LOC122343417 NA non-coding downstream 126547 2203585 ~ 2289119 (-)
G25362 NA non-coding downstream 131888 2283285 ~ 2283778 (-)
LOC122343454 NA non-coding downstream 232997 2167305 ~ 2182669 (-)
G25299 LOC108267243 non-coding downstream 251958 2163426 ~ 2163708 (-)
G25298 LOC107549254,LOC107563058 non-coding downstream 252347 2162530 ~ 2163319 (-)
LOC122343423 NA non-coding upstream 110742 2534205 ~ 2538006 (-)
G25625 NA non-coding upstream 556696 2980159 ~ 2996458 (-)
LOC122342459 NA non-coding upstream 692941 3116404 ~ 3117297 (-)
LOC122342458 NA non-coding upstream 694016 3117479 ~ 3119550 (-)
G25673 wnt5b,LOC107656325,LOC103026771,LOC107580320,LOC107744029,LOC107726030 non-coding upstream 957195 3380658 ~ 3676399 (-)
dock4b dock4b,LOC107656358,LOC108425388 other downstream 39950 2299635 ~ 2375716 (-)
tnni4a zgc:101560,LOC107725970,LOC107584059,LOC107658770,LOC107656258,LOC107581287 other downstream 317865 2091351 ~ 2097801 (-)
cald1a cald1a,LOC107583995,LOC107725991,LOC107658884,LOC107656362,LOC107710121 other downstream 327087 2042953 ~ 2088579 (-)
rsph9 rsph9,LOC107658900,LOC107583979,LOC107579672,LOC107710090,LOC107656226 other downstream 513003 1898403 ~ 1902663 (-)
ccdc167 ccdc167 other downstream 760840 1653591 ~ 1654826 (-)
LOC122342907 NA other upstream 48821 2472284 ~ 2473068 (-)
ccdc3a ccdc3,ccdc3a,LOC107725961,LOC107658768,LOC107580337,LOC107744050 other upstream 576419 2999882 ~ 3012214 (-)
LOC122342805 NA other upstream 595629 3019092 ~ 3021512 (-)
LOC122342819 foxp2,foxp4,LOC107725896,LOC107728618,LOC107656011,LOC107675840 other upstream 1111199 3534662 ~ 3577123 (-)
LOC122342822 tmem9b,LOC107674442,LOC107750540,LOC107754675,LOC107585953,LOC107700603,LOC107593285 other upstream 1177537 3601000 ~ 3601991 (-)

Expression


Co-expression Network