si:ch211-244b2.3


Basic Information

Item Value
gene id si:ch211-244b2.3
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13461043 ~ 13465673 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237129.1
AGGCATCCAGTTGGTTCACATTCATCCGCAGAGAAGCTTGTTTCGGAAAGTCGAAAAATAGTCTGAAAAGAAAGCGAAACCGTGTCAGCGCCTCGGCGGTGAAGCGCTTTAAATCCTGTCCGAACGAAACGGCGGTACGTTTTATTCGGCAAATacgttttgtagttttttgacATGCTATCGATGGTAGTCTCCAGGAACTATTATATTCGCGTGAAGATGAATTAAAGCAAGAGAAGCTATGAATTTCGACCCGGCTGTTGTTCTTCGGGGAAAGGGAATAACAGAATTACCTAACAGCAGCATGGCGACAGCCTCGGGTAATCACTTCGAGTGGCAGCTATATAATGGACAGCAGTGGGCTtctatattaaatgattttattatcgAGGCCCATTACTGTCAACCGGGGGCAAACGGGATCACCATCAACCTCACCTTCGGGAATGCCTATATCGACTTCGACGGGATGACGGTCGACGGGCCTCTTGTCAACCTCAGAGTACGACGCAACGCGCTCCTGTCTCCCGACCAGAAAGAAGTGATCGGCTGGTACTACAGAGATAACCAGCGCTGGTGCGAATACGGATCGGACGGATCGGGTGGGAGGTCATCTTCGATCAAAAGTGATTTCATGGAGCAGCAGTACGTGAAGAACCCGAGTGGCTCTTTCCAGTTTACTGTAGGAAGCATGACTTACAAGGTGGACTTCGCTCATATGACTCAAACCAATCTGTCCACGAAAATGTTGAGGAACGTGAGACGGCGGCCAAAATTCAACGAAGTAGTAACGGACAACAGCGGCAATCTAAACAGTTTACCGACTCTGGCATCTCCCTCTGCAAACCCTTCAAATTCGTCCTCTCATTACATCTGGGAGTTTATGGATGATGAGGGTGTTTGGGCCGAGTACCAGAAACCCGGATGTTCGCTGGACAGTGCAGAAATCGAGAGGTTGTATCGGCTTAACCCGCAGCGCCAAGTTTCATTCACAGTCAGGCGATTTACGTACACTCTTTACTTTGTTGGAATGTATCAAGTCAACAATAAATACGGCACGAAAAGAGCTGTCAGGAGAACTGCCAGTGAAATCCAGTCAACAAACAGTACATCATCCCAAGCTCGCTGGCAGTTCAAAGACATGGATGGCAACTGGAAGGACTACGTTAAAGGCGCTTCTCGGGGATGCTGCAGTGTTTCGAGCGAAGACATCGAAGCGCGGTACGGGCTGGACTCCACTGGGACGATGAGTTTCACAGCGGGCAGGTTCAGCTACAAGCTCGACTTCTCAAGCATGACGCAGACCAACCTGTCCACCAACACGGCGAGATCCGTCCAACGCCTTCTGCCATGAAACCCTCACCTGCCTCTTTTTATGTGTACTTTAACATTTACACGAAAGATCTCAGGACGCCGGTTTCTTTCTCGGAAAACGGGATGCCAAATGTCAAAATTACGTTTACTTTATGCTATAACCCATGTGCCTGTGCCGTTTtgataatagaaaaaaaaaaaaaaaaaaaaaaaacatggttccCGTGGTGATCACGTTCTTGAaaggatttagtttttgttttcttttcaatatatatatatataaggataCGAAGACTGCTTTCCATGTGCAATACTTTTATGACAGCTTTCAACATTCATGTCTGCACGTCttgttttgttgattaaaataatatataatgttgaaTATATAATGAGGTGCTGACACCTACTGGGtaattcattttctttgaatttttcaCGACTtgcatgttgataatgaaatgttaaaaaatgtttattaaaacttaTAAATTGAACTCACTACATTCACAATTA
>XM_043237130.1
CAGGCATCCAGTTGGTTCACATTCATCCGCAGAGAAGCTTGTTTCGGAAAGTCGAAAAATAGTCTGAAAAGAAAGCGAAACCGTGTCAGCGCCTCGGCGGTGAAGCGCTTTAAATCCTGTCCGAACGAAACGGCGCGTGAAGATGAATTAAAGCAAGAGAAGCTATGAATTTCGACCCGGCTGTTGTTCTTCGGGGAAAGGGAATAACAGAATTACCTAACAGCAGCATGGCGACAGCCTCGGGTAATCACTTCGAGTGGCAGCTATATAATGGACAGCAGTGGGCTtctatattaaatgattttattatcgAGGCCCATTACTGTCAACCGGGGGCAAACGGGATCACCATCAACCTCACCTTCGGGAATGCCTATATCGACTTCGACGGGATGACGGTCGACGGGCCTCTTGTCAACCTCAGAGTACGACGCAACGCGCTCCTGTCTCCCGACCAGAAAGAAGTGATCGGCTGGTACTACAGAGATAACCAGCGCTGGTGCGAATACGGATCGGACGGATCGGGTGGGAGGTCATCTTCGATCAAAAGTGATTTCATGGAGCAGCAGTACGTGAAGAACCCGAGTGGCTCTTTCCAGTTTACTGTAGGAAGCATGACTTACAAGGTGGACTTCGCTCATATGACTCAAACCAATCTGTCCACGAAAATGTTGAGGAACGTGAGACGGCGGCCAAAATTCAACGAAGTAGTAACGGACAACAGCGGCAATCTAAACAGTTTACCGACTCTGGCATCTCCCTCTGCAAACCCTTCAAATTCGTCCTCTCATTACATCTGGGAGTTTATGGATGATGAGGGTGTTTGGGCCGAGTACCAGAAACCCGGATGTTCGCTGGACAGTGCAGAAATCGAGAGGTTGTATCGGCTTAACCCGCAGCGCCAAGTTTCATTCACAGTCAGGCGATTTACGTACACTCTTTACTTTGTTGGAATGTATCAAGTCAACAATAAATACGGCACGAAAAGAGCTGTCAGGAGAACTGCCAGTGAAATCCAGTCAACAAACAGTACATCATCCCAAGCTCGCTGGCAGTTCAAAGACATGGATGGCAACTGGAAGGACTACGTTAAAGGCGCTTCTCGGGGATGCTGCAGTGTTTCGAGCGAAGACATCGAAGCGCGGTACGGGCTGGACTCCACTGGGACGATGAGTTTCACAGCGGGCAGGTTCAGCTACAAGCTCGACTTCTCAAGCATGACGCAGACCAACCTGTCCACCAACACGGCGAGATCCGTCCAACGCCTTCTGCCATGAAACCCTCACCTGCCTCTTTTTATGTGTACTTTAACATTTACACGAAAGATCTCAGGACGCCGGTTTCTTTCTCGGAAAACGGGATGCCAAATGTCAAAATTACGTTTACTTTATGCTATAACCCATGTGCCTGTGCCGTTTtgataatagaaaaaaaaaaaaaaaaaaaaaaaacatggttccCGTGGTGATCACGTTCTTGAaaggatttagtttttgttttcttttcaatatatatatatataaggataCGAAGACTGCTTTCCATGTGCAATACTTTTATGACAGCTTTCAACATTCATGTCTGCACGTCttgttttgttgattaaaataatatataatgttgaaTATATAATGAGGTGCTGACACCTACTGGGtaattcattttctttgaatttttcaCGACTtgcatgttgataatgaaatgttaaaaaatgtttattaaaacttaTAAATTGAACTCACTACATTCACAATTA
>XM_043237131.1
GGCATCCAGTTGGTTCACATTCATCCGCAGAGAAGCTTGTTTCGGAAAGTCGAAAAATAGTCTGAAAAGAAAGCGAAACCGTGTCAGCGCCTCGGCGGTGAAGCGCTTTAAATCCTGTCCGAACGAAACGGCGGTACGTTTTATTCGGCAAATacgttttgtagttttttgacATGCTATCGATGGTAGTCTCCAGGAACTATTATATTCGCGTGAAGATGAATTAAAGCAAGAGAAGCTATGAATTTCGACCCGGCTGTTGTTCTTCGGGTAGGTGAAGTTTAAGGGAAAGGGAATAACAGAATTACCTAACAGCAGCATGGCGACAGCCTCGGGTAATCACTTCGAGTGGCAGCTATATAATGGACAGCAGTGGGCTtctatattaaatgattttattatcgAGGCCCATTACTGTCAACCGGGGGCAAACGGGATCACCATCAACCTCACCTTCGGGAATGCCTATATCGACTTCGACGGGATGACGGTCGACGGGCCTCTTGTCAACCTCAGAGTACGACGCAACGCGCTCCTGTCTCCCGACCAGAAAGAAGTGATCGGCTGGTACTACAGAGATAACCAGCGCTGGTGCGAATACGGATCGGACGGATCGGGTGGGAGGTCATCTTCGATCAAAAGTGATTTCATGGAGCAGCAGTACGTGAAGAACCCGAGTGGCTCTTTCCAGTTTACTGTAGGAAGCATGACTTACAAGGTGGACTTCGCTCATATGACTCAAACCAATCTGTCCACGAAAATGTTGAGGAACGTGAGACGGCGGCCAAAATTCAACGAAGTAGTAACGGACAACAGCGGCAATCTAAACAGTTTACCGACTCTGGCATCTCCCTCTGCAAACCCTTCAAATTCGTCCTCTCATTACATCTGGGAGTTTATGGATGATGAGGGTGTTTGGGCCGAGTACCAGAAACCCGGATGTTCGCTGGACAGTGCAGAAATCGAGAGGTTGTATCGGCTTAACCCGCAGCGCCAAGTTTCATTCACAGTCAGGCGATTTACGTACACTCTTTACTTTGTTGGAATGTATCAAGTCAACAATAAATACGGCACGAAAAGAGCTGTCAGGAGAACTGCCAGTGAAATCCAGTCAACAAACAGTACATCATCCCAAGCTCGCTGGCAGTTCAAAGACATGGATGGCAACTGGAAGGACTACGTTAAAGGCGCTTCTCGGGGATGCTGCAGTGTTTCGAGCGAAGACATCGAAGCGCGGTACGGGCTGGACTCCACTGGGACGATGAGTTTCACAGCGGGCAGGTTCAGCTACAAGCTCGACTTCTCAAGCATGACGCAGACCAACCTGTCCACCAACACGGCGAGATCCGTCCAACGCCTTCTGCCATGAAACCCTCACCTGCCTCTTTTTATGTGTACTTTAACATTTACACGAAAGATCTCAGGACGCCGGTTTCTTTCTCGGAAAACGGGATGCCAAATGTCAAAATTACGTTTACTTTATGCTATAACCCATGTGCCTGTGCCGTTTtgataatagaaaaaaaaaaaaaaaaaaaaaaaacatggttccCGTGGTGATCACGTTCTTGAaaggatttagtttttgttttcttttcaatatatatatatataaggataCGAAGACTGCTTTCCATGTGCAATACTTTTATGACAGCTTTCAACATTCATGTCTGCACGTCttgttttgttgattaaaataatatataatgttgaaTATATAATGAGGTGCTGACACCTACTGGGtaattcattttctttgaatttttcaCGACTtgcatgttgataatgaaatgttaaaaaatgtttattaaaacttaTAAATTGAACTCACTACATTCACAATTA
>XM_043237132.1
GGCATCCAGTTGGTTCACATTCATCCGCAGAGAAGCTTGTTTCGGAAAGTCGAAAAATAGTCTGAAAAGAAAGCGAAACCGTGTCAGCGCCTCGGCGGTGAAGCGCTTTAAATCCTGTCCGAACGAAACGGCGGTACGTTTTATTCGGCAAATacgttttgtagttttttgacATGCTATCGATGGTAGTCTCCAGGAACTATTATATTCGGGAAAGGGAATAACAGAATTACCTAACAGCAGCATGGCGACAGCCTCGGGTAATCACTTCGAGTGGCAGCTATATAATGGACAGCAGTGGGCTtctatattaaatgattttattatcgAGGCCCATTACTGTCAACCGGGGGCAAACGGGATCACCATCAACCTCACCTTCGGGAATGCCTATATCGACTTCGACGGGATGACGGTCGACGGGCCTCTTGTCAACCTCAGAGTACGACGCAACGCGCTCCTGTCTCCCGACCAGAAAGAAGTGATCGGCTGGTACTACAGAGATAACCAGCGCTGGTGCGAATACGGATCGGACGGATCGGGTGGGAGGTCATCTTCGATCAAAAGTGATTTCATGGAGCAGCAGTACGTGAAGAACCCGAGTGGCTCTTTCCAGTTTACTGTAGGAAGCATGACTTACAAGGTGGACTTCGCTCATATGACTCAAACCAATCTGTCCACGAAAATGTTGAGGAACGTGAGACGGCGGCCAAAATTCAACGAAGTAGTAACGGACAACAGCGGCAATCTAAACAGTTTACCGACTCTGGCATCTCCCTCTGCAAACCCTTCAAATTCGTCCTCTCATTACATCTGGGAGTTTATGGATGATGAGGGTGTTTGGGCCGAGTACCAGAAACCCGGATGTTCGCTGGACAGTGCAGAAATCGAGAGGTTGTATCGGCTTAACCCGCAGCGCCAAGTTTCATTCACAGTCAGGCGATTTACGTACACTCTTTACTTTGTTGGAATGTATCAAGTCAACAATAAATACGGCACGAAAAGAGCTGTCAGGAGAACTGCCAGTGAAATCCAGTCAACAAACAGTACATCATCCCAAGCTCGCTGGCAGTTCAAAGACATGGATGGCAACTGGAAGGACTACGTTAAAGGCGCTTCTCGGGGATGCTGCAGTGTTTCGAGCGAAGACATCGAAGCGCGGTACGGGCTGGACTCCACTGGGACGATGAGTTTCACAGCGGGCAGGTTCAGCTACAAGCTCGACTTCTCAAGCATGACGCAGACCAACCTGTCCACCAACACGGCGAGATCCGTCCAACGCCTTCTGCCATGAAACCCTCACCTGCCTCTTTTTATGTGTACTTTAACATTTACACGAAAGATCTCAGGACGCCGGTTTCTTTCTCGGAAAACGGGATGCCAAATGTCAAAATTACGTTTACTTTATGCTATAACCCATGTGCCTGTGCCGTTTtgataatagaaaaaaaaaaaaaaaaaaaaaaaacatggttccCGTGGTGATCACGTTCTTGAaaggatttagtttttgttttcttttcaatatatatatatataaggataCGAAGACTGCTTTCCATGTGCAATACTTTTATGACAGCTTTCAACATTCATGTCTGCACGTCttgttttgttgattaaaataatatataatgttgaaTATATAATGAGGTGCTGACACCTACTGGGtaattcattttctttgaatttttcaCGACTtgcatgttgataatgaaatgttaaaaaatgtttattaaaacttaTAAATTGAACTCACTACATTCACAATTA

Function

NR:

description
PREDICTED: poly [ADP-ribose] polymerase 12-like

GO:

id name namespace
GO:0030163 protein catabolic process biological_process
GO:0009057 macromolecule catabolic process biological_process
GO:0044257 cellular protein catabolic process biological_process
GO:0044265 cellular macromolecule catabolic process biological_process
GO:0051603 proteolysis involved in cellular protein catabolic process biological_process

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237129.1 False 1833 mRNA 0.45 13 13461043 13465672
XM_043237130.1 False 1756 mRNA 0.45 13 13461043 13465673
XM_043237131.1 True 1848 mRNA 0.45 13 13461043 13465671
XM_043237132.1 False 1773 mRNA 0.45 12 13461043 13465671

Neighbor

gene id symbol gene type direction distance location
usp44 usp44,LOC107755158,LOC107597009,LOC107667716,LOC107748469,LOC107567668,LOC107689228 coding downstream 20940 13433309 ~ 13440103 (-)
fgd6 fgd6,LOC107755156,LOC107689226,LOC107667720,LOC107748482,LOC107567667,LOC107597032 coding downstream 57827 13384588 ~ 13403216 (-)
nr2c1 nr2c1,LOC107689225,LOC107755159 coding downstream 76597 13376174 ~ 13384446 (-)
ndufa12 ndufa12,LOC107667714,LOC107755161 coding downstream 85700 13373631 ~ 13375343 (-)
rbm17 rbm17,LOC107755150,LOC107748463,LOC107663450 coding downstream 159714 13281183 ~ 13301329 (-)
si:ch211-244b2.4 NA coding upstream 355 13466028 ~ 13470349 (-)
st8sia1 st8sia1,LOC107748471,LOC107755164,LOC107567669 coding upstream 19113 13484786 ~ 13494427 (-)
b4galnt3a b4galnt3a,LOC107689248,LOC107689733,LOC107748486,LOC107584744 coding upstream 37263 13502936 ~ 13513404 (-)
slc6a1l LOC107597007,LOC107584717,LOC107689715,LOC107748475,LOC107689236,LOC108427058,LOC105916091 coding upstream 169940 13635613 ~ 13648049 (-)
LOC122343493 LOC107726837,LOC107748473,LOC107689714,LOC107584715 coding upstream 186852 13652525 ~ 13665137 (-)
LOC122342564 NA non-coding downstream 116786 13343726 ~ 13344257 (-)
G28377 NA non-coding downstream 141295 13311873 ~ 13319748 (-)
G28359 NA non-coding downstream 209009 13250651 ~ 13252034 (-)
G28353 NA non-coding downstream 215655 13242506 ~ 13245388 (-)
G28350 NA non-coding downstream 231724 13229094 ~ 13229319 (-)
G28434 iqsec3,LOC107689235,LOC106609634,LOC107689713 non-coding upstream 144543 13610216 ~ 13612771 (-)
G28545 LOC107689243,LOC107689721,LOC107726844,LOC107569223,LOC107566846 non-coding upstream 355023 13820696 ~ 13827052 (-)
G28564 NA non-coding upstream 401104 13866777 ~ 13867298 (-)
G28544 NA non-coding upstream 403749 13869422 ~ 13870614 (-)
G28568 NA non-coding upstream 414358 13880031 ~ 13880847 (-)
G28397 vezt,metap2,metap2a,LOC107755144,LOC107689227,LOC107597031,LOC107667718,LOC107755160,LOC107689230,LOC107597011 other downstream 28340 13411624 ~ 13432703 (-)
tmcc3 tmcc3,LOC107689246,LOC107667715 other downstream 99105 13316932 ~ 13361938 (-)
tmem110l tmem110l,LOC107597025,LOC107748459,LOC107675974,LOC107555827,LOC107666935 other downstream 274153 13176961 ~ 13186890 (-)
cpm cpm,LOC107728505,LOC107710685,LOC107666948,LOC107669712 other downstream 971862 12465612 ~ 12489181 (-)
G28093 slc35e3,LOC107710682,LOC107556774,LOC107737854 other downstream 1445276 12014631 ~ 12015767 (-)
LOC122343399 LOC107726825,LOC107689735,LOC107584742 other upstream 226798 13692471 ~ 13698715 (-)
LOC122343280 NA other upstream 349901 13815574 ~ 13831851 (-)
G28575 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 other upstream 509684 13975357 ~ 13980559 (-)
cerk cerk,LOC107710741,LOC107689729,LOC107552286,LOC107600034,LOC107721152 other upstream 689819 14155492 ~ 14176742 (-)
LOC122342862 celsr1a,LOC107666207,LOC107710744,LOC107569230,LOC107721151,LOC107600014,LOC107689740 other upstream 1222200 14687873 ~ 14704622 (-)

Expression


Co-expression Network