slco1d1 (LOC107689241,LOC107597003,LOC107584712,LOC107689720,LOC107689242,LOC107726840)


Basic Information

Item Value
gene id slco1d1
gene name LOC107689241,LOC107597003,LOC107584712,LOC107689720,LOC107689242,LOC107726840
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13718604 ~ 13729434 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237143.1
CAGATGGACTTGATTGTTTGGTTACTGATTAAAGGAGATGTTATAACACTGAATGATAAAGCCTTACCTGCGAGCAAAGTGCCAGAGTCCTCCATCCGTTCTGAGGGACACGGTCAACAGCGCAGGGCATCATGAGCGTGGAAAAGAAGACGACAGGAGAGCCATGCTGCTCCAAATTCAAGATGTTTTTGGCTGCCATATCTTTCGTGTATTTTGCCAAAGCATTTCAGGGCAGCTACATGAAAAGCTCTGTCACACAGATTGAGAGACGTTTTGACATTCCCAGCTCGCTGATCGGATTCATTGATGGAAGTTTTGAAATCGGTAATCTGCTTGTAATAGCACTTGTCAGTTACTTTGGTGCTAAGCTTCACAGACCACGACTCATTGGAGCTGGATGTTTAATCATGGCCATGGGATCCTTCATAACCGCGTCACCACATTTCTTCCAAGGACCGTACAAATACGAAACAACAGTGTCACATTTATCTGCCTCTAACGGTACAGAGAGCATGCTACCATGTTTAACCAACGGGAGTCTTGCACAAGATGAAATTCCCACAGTGGAAATTCAAGAAGaatGTAAGAGAGCAGCCAGTTCCTCCTTGTGGGTATATGTGTTTCTGGGGAACATGCTTCGTGGGGTAGGAGAGACACCCGTCGTACCTCTTGGGTTGTCTTATCTGGATGATTTTTCGAGGGAGGAAAACACTGCTCTTTACATGGCTGTCGTGCAGACTGTGGGAATAATGGGGCCCATGTTTGGATTCATGTTAGGATCTTTCTGTGCCAAGCTCTACGTGGACATAGGAGCAGTAGACTTAGataccATCGCCATCAACCACAAAGACTCACGCTGGGTTGGTGCCTGGTGGTTGGGCTTTTTGATAACTGGGGGAGTGATGTTACTGGCTGGAATTCCCTTTTGGTTCCTTCCCAAATCTCTTCCTAAGCAGGTTGAGACTGAAACCGAGACAAAATCAAATGAGGGCGAGCAGGACCGTTTCATTCCTGACAACAACAAACAGAGTGATGTTCCAGACAAAGCAGCTCCAGTTTCCATGGCAGTTCTGGCTACAGGTTTTCTGCCATCCCTGAAAAAACTCTTCAGCAACACGATTTACATACTTCTTTTATGCACTGCATTTGTGCAAGTCAATGGTTTTATTGGAATGATCACATTTAAGCCAAAGTTTATGGAGCAAACCTATGGCCAATCAGCATCAAAGGCTATATTTTTGATAGGCACTATGAATCTACCAGCTGTGGCTTTGGGAATTGTCGCCGGTGGGTTTATAATGAAGAGGTTCAAACTGAATATTCTCGGAGCCACCAAGATCTGCATTGGATCATCTGTTCTGGCTTTCTGCACGCTTCTCATTCAGTATTTCCTGCAGTGTGACAACACACAAGTGCCTGGACTTACAGTGTCATATCAAGGACTTCCGCAGGTTTCCTATCAACTGAATACGCTCATGTCTCCATGTAACATGGGTTGCTCCTGCTCTCTCAAGCACTGGGATCCCATATGTGCCAGCAATGGTTTGACCTATGCCTCCCCCTGCCTCGCTGGCTGCCAAAGCTCCACTGGTGACGGCAAGGATATGGTATTCCACAACTGCTCCTGTGTTGGAGATTCGCCTCTTCCGTATGCAAACATGTCAGCAGTGCTGGGCCAGTGTCCTCGAAAGAGTGATTGTGACTCCATGTTTAAGCTCTACATGGCGGTGACAGTCATTGGTGCCTTTCTCTCAGCTTGTGGGGCCACACCTGGCTACATTATTGTGCTCAGATCCATAAATCCAGAACTGAAGTCTTTTGCTCTTGGTATTTATACTTTGGTTGTTCGGACTCTGGGTGGCATTCCCCCTGCAATTTACTTTGGAGCCTTGATTGACAGGACCTGTCTGAAATGGGGCACAAAACAATGCGGAGGGAGAGGAGCGTGTCGTATTTATGATTCTGGTGCCTTCAGAAACGCTTTCTTGGGTCTTATTTATGGCCTGTATTCCTTATCCTACATATTGTGGGGAGTCGTGTACGTTAAACTGTCTCATCGCGAAAAGAAGCTTGCGCTAATGAACCAATTAAAAGCTCCAGAACAGGATGGCAATGGTGTTTCTGCTGGCAATGGGAATGTATCTTCAGCTATTGTAAAATGCAGCGAAAACCCAGACCAGGAGACCACTATCTGAAATTATACCTCCGATATTGCACCAAAAAGTGTTAAAGGAGATTTCCATatcaatgtaaatgttttggcCGTGGAATTGTGttgatttgtacatttattgattAGATGCTGTTATTTTCTGGAtctaatatatttgtatttgctattttttacacatttaaagaacagcatttaagcagTTACAGAACTAGAAAGTCATGTATTGtacttaaataaaacatgcctaTGTGTGGATTATGTGGTTTATGAGACCAGAACATTGTTACAAAGAATTATCTGTTATTTTTTCAGGACATTGTAAGCTCACTGTCTTATAGGAGTTCCGTGTCATGTCATGAAGATATACATTGAGGTTacaatatgtttgtgtgtgtgtgtgtgtgtgtgtgtgttgttttgtaaaaCCTAGTGAATTTCTGGATGGAACTGTATGCAACTGAAATGGATAGCATGTAAAGTACATTGGAGCGCTTGCCAACATGACTTATGACCTGTGATTGTGTactttataaaactttaaaccactcatgaatttaaataatagtaaaaacattCCTTTTAATAAGAATATCAGGCAGTTTGCATCAATACACCATTAcctttttatacaatttaagcatttgtttttaggaatatttgttgaaataaaacaacaacaacaacaaaaaa
>XM_043237144.1
GCCAGAGTCCTCCATCCGTTCTGAGGGACACGGTCAACAGCGCAGGTAGGGCATCATGAGCGTGGAAAAGAAGACGACAGGAGAGCCATGCTGCTCCAAATTCAAGATGTTTTTGGCTGCCATATCTTTCGTGTATTTTGCCAAAGCATTTCAGGGCAGCTACATGAAAAGCTCTGTCACACAGATTGAGAGACGTTTTGACATTCCCAGCTCGCTGATCGGATTCATTGATGGAAGTTTTGAAATCGGTAATCTGCTTGTAATAGCACTTGTCAGTTACTTTGGTGCTAAGCTTCACAGACCACGACTCATTGGAGCTGGATGTTTAATCATGGCCATGGGATCCTTCATAACCGCGTCACCACATTTCTTCCAAGGACCGTACAAATACGAAACAACAGTGTCACATTTATCTGCCTCTAACGGTACAGAGAGCATGCTACCATGTTTAACCAACGGGAGTCTTGCACAAGATGAAATTCCCACAGTGGAAATTCAAGAAGaatGTAAGAGAGCAGCCAGTTCCTCCTTGTGGGTATATGTGTTTCTGGGGAACATGCTTCGTGGGGTAGGAGAGACACCCGTCGTACCTCTTGGGTTGTCTTATCTGGATGATTTTTCGAGGGAGGAAAACACTGCTCTTTACATGGCTGTCGTGCAGACTGTGGGAATAATGGGGCCCATGTTTGGATTCATGTTAGGATCTTTCTGTGCCAAGCTCTACGTGGACATAGGAGCAGTAGACTTAGataccATCGCCATCAACCACAAAGACTCACGCTGGGTTGGTGCCTGGTGGTTGGGCTTTTTGATAACTGGGGGAGTGATGTTACTGGCTGGAATTCCCTTTTGGTTCCTTCCCAAATCTCTTCCTAAGCAGGTTGAGACTGAAACCGAGACAAAATCAAATGAGGGCGAGCAGGACCGTTTCATTCCTGACAACAACAAACAGAGTGATGTTCCAGACAAAGCAGCTCCAGTTTCCATGGCAGTTCTGGCTACAGGTTTTCTGCCATCCCTGAAAAAACTCTTCAGCAACACGATTTACATACTTCTTTTATGCACTGCATTTGTGCAAGTCAATGGTTTTATTGGAATGATCACATTTAAGCCAAAGTTTATGGAGCAAACCTATGGCCAATCAGCATCAAAGGCTATATTTTTGATAGGCACTATGAATCTACCAGCTGTGGCTTTGGGAATTGTCGCCGGTGGGTTTATAATGAAGAGGTTCAAACTGAATATTCTCGGAGCCACCAAGATCTGCATTGGATCATCTGTTCTGGCTTTCTGCACGCTTCTCATTCAGTATTTCCTGCAGTGTGACAACACACAAGTGCCTGGACTTACAGTGTCATATCAAGGACTTCCGCAGGTTTCCTATCAACTGAATACGCTCATGTCTCCATGTAACATGGGTTGCTCCTGCTCTCTCAAGCACTGGGATCCCATATGTGCCAGCAATGGTTTGACCTATGCCTCCCCCTGCCTCGCTGGCTGCCAAAGCTCCACTGGTGACGGCAAGGATATGGTATTCCACAACTGCTCCTGTGTTGGAGATTCGCCTCTTCCGTATGCAAACATGTCAGCAGTGCTGGGCCAGTGTCCTCGAAAGAGTGATTGTGACTCCATGTTTAAGCTCTACATGGCGGTGACAGTCATTGGTGCCTTTCTCTCAGCTTGTGGGGCCACACCTGGCTACATTATTGTGCTCAGATCCATAAATCCAGAACTGAAGTCTTTTGCTCTTGGTATTTATACTTTGGTTGTTCGGACTCTGGGTGGCATTCCCCCTGCAATTTACTTTGGAGCCTTGATTGACAGGACCTGTCTGAAATGGGGCACAAAACAATGCGGAGGGAGAGGAGCGTGTCGTATTTATGATTCTGGTGCCTTCAGAAACGCTTTCTTGGGTCTTATTTATGGCCTGTATTCCTTATCCTACATATTGTGGGGAGTCGTGTACGTTAAACTGTCTCATCGCGAAAAGAAGCTTGCGCTAATGAACCAATTAAAAGCTCCAGAACAGGATGGCAATGGTGTTTCTGCTGGCAATGGGAATGTATCTTCAGCTATTGTAAAATGCAGCGAAAACCCAGACCAGGAGACCACTATCTGAAATTATACCTCCGATATTGCACCAAAAAGTGTTAAAGGAGATTTCCATatcaatgtaaatgttttggcCGTGGAATTGTGttgatttgtacatttattgattAGATGCTGTTATTTTCTGGAtctaatatatttgtatttgctattttttacacatttaaagaacagcatttaagcagTTACAGAACTAGAAAGTCATGTATTGtacttaaataaaacatgcctaTGTGTGGATTATGTGGTTTATGAGACCAGAACATTGTTACAAAGAATTATCTGTTATTTTTTCAGGACATTGTAAGCTCACTGTCTTATAGGAGTTCCGTGTCATGTCATGAAGATATACATTGAGGTTacaatatgtttgtgtgtgtgtgtgtgtgtgtgtgtgttgttttgtaaaaCCTAGTGAATTTCTGGATGGAACTGTATGCAACTGAAATGGATAGCATGTAAAGTACATTGGAGCGCTTGCCAACATGACTTATGACCTGTGATTGTGTactttataaaactttaaaccactcatgaatttaaataatagtaaaaacattCCTTTTAATAAGAATATCAGGCAGTTTGCATCAATACACCATTAcctttttatacaatttaagcatttgtttttaggaatatttgttgaaataaaacaacaacaacaacaaaaaa

Function

NR:

description
solute carrier organic anion transporter family member 1C1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237143.1 True 2863 mRNA 0.43 15 13718604 13729434
XM_043237144.1 False 2787 mRNA 0.43 15 13718604 13729354

Neighbor

gene id symbol gene type direction distance location
slco1e1 slco1e1,LOC107584713,LOC107716166,LOC107689719,LOC107597035 coding downstream 1381 13708792 ~ 13717223 (-)
LOC122343398 LOC107726825,LOC107584742,LOC107689735 coding downstream 10525 13702383 ~ 13708079 (-)
LOC122343316 NA coding downstream 30964 13683225 ~ 13687640 (-)
pyroxd1 pyroxd1,ryroxd1,LOC107597005,LOC107584714,LOC107689253,LOC107689716 coding downstream 39516 13674271 ~ 13679088 (-)
LOC122343493 LOC107726837,LOC107748473,LOC107689714,LOC107584715 coding downstream 53467 13652525 ~ 13665137 (-)
LOC122342857 LOC107689242,LOC107584712 coding upstream 7171 13736605 ~ 13748988 (-)
LOC122342931 LOC107689242,LOC107689241,LOC107584712,LOC107689720,LOC107597003 coding upstream 21400 13750834 ~ 13760856 (-)
LOC122343235 LOC107689737,LOC107716193,LOC107689255,LOC107584741,LOC107716201 coding upstream 33956 13763390 ~ 13784708 (-)
LOC122342633 NA coding upstream 240830 13970264 ~ 13975630 (-)
alg10 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 coding upstream 246371 13975805 ~ 13980615 (-)
G28434 iqsec3,LOC107689235,LOC106609634,LOC107689713 non-coding downstream 105833 13610216 ~ 13612771 (-)
LOC122342564 NA non-coding downstream 374347 13343726 ~ 13344257 (-)
G28377 NA non-coding downstream 398856 13311873 ~ 13319748 (-)
G28359 NA non-coding downstream 466570 13250651 ~ 13252034 (-)
G28353 NA non-coding downstream 473216 13242506 ~ 13245388 (-)
G28545 LOC107689243,LOC107689721,LOC107726844,LOC107569223,LOC107566846 non-coding upstream 91262 13820696 ~ 13827052 (-)
G28564 NA non-coding upstream 137343 13866777 ~ 13867298 (-)
G28544 NA non-coding upstream 139988 13869422 ~ 13870614 (-)
G28568 NA non-coding upstream 150597 13880031 ~ 13880847 (-)
G28569 NA non-coding upstream 151871 13881305 ~ 13882012 (-)
LOC122343399 LOC107726825,LOC107689735,LOC107584742 other downstream 19889 13692471 ~ 13698715 (-)
G28397 vezt,metap2,metap2a,LOC107755144,LOC107689227,LOC107597031,LOC107667718,LOC107755160,LOC107689230,LOC107597011 other downstream 285901 13411624 ~ 13432703 (-)
tmcc3 tmcc3,LOC107689246,LOC107667715 other downstream 356666 13316932 ~ 13361938 (-)
tmem110l tmem110l,LOC107597025,LOC107748459,LOC107675974,LOC107555827,LOC107666935 other downstream 531714 13176961 ~ 13186890 (-)
cpm cpm,LOC107728505,LOC107710685,LOC107666948,LOC107669712 other downstream 1229423 12465612 ~ 12489181 (-)
LOC122343280 NA other upstream 86140 13815574 ~ 13831851 (-)
G28575 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 other upstream 245923 13975357 ~ 13980559 (-)
cerk cerk,LOC107710741,LOC107689729,LOC107552286,LOC107600034,LOC107721152 other upstream 426058 14155492 ~ 14176742 (-)
LOC122342862 celsr1a,LOC107666207,LOC107710744,LOC107569230,LOC107721151,LOC107600014,LOC107689740 other upstream 958439 14687873 ~ 14704622 (-)
LOC122342642 pfkfb3 other upstream 1079109 14808543 ~ 14810711 (-)

Expression


Co-expression Network