LOC122342946


Basic Information

Item Value
gene id LOC122342946
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24607037 ~ 24619391 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237169.1
actatTCTTCTCCTTTTCATCCTTTCTAAAAGAAAGCAGGAAGCAGGTTCATTTCATTTACAGAAGTGCGCAGTATTTCAGAGCTGCTGTTCAACACAAGGGATTCAGAAGAGGAAATAGAAAGAGCTTTGAATATCGTTTGATAAGACAACCCAAAGATGACGTCAGAGCAGCTTCTCGCCACACTGCATACTCTagacaaagaaaaactgaagagGTTTAAATGGCACTTAAAACAAGATGCTCACGCTTCAGCTGTCAATCTAGAGAATTCAGACACTGTTGACACAGTGGATCTGATGATGGCATGTTGTGGACCAGAAAGATCTGTGAAGATCACACTGAACATCTTGAGAAAGATGAAACTGAACCATCTGGCTGACGATTTAGAGAACAAACTAAAAGCTCCAGCCCAGATGAGAAGCAGTGCTCAGATCGGTGTCAGTGTTGATGTAAACGCTGAAACAGGTGCATGTGTCAGTGTTCCTGTATTCACTGGCAACACCATCACAGGACCAGTGACCATTTATGCCTCGCATGCTGCTGGAAATGGTATATCAGAGAAAAACTCAGAAAATCAAGaatttttaAGACTGCAAAAGTTCTTGGAAACTCACAAAACCAACATGAAGAAgaaagcaaaatgtatttttgagggcaagaaagaaaataaagcgcATCTCAAAGATGTTTTCACAGAACTATTCATCACAGAGGGAGATATTGAAGAAGTCAATCAGGAACACGAGATTCTGAAGATTGATGAGGCTTTCAGGAAGAAAATAACACAGGGGAAACCAATCAAATGCAATGATATGTTCAGCTTATTGCAGGAAAACAGTGATAAGAACACCGTGTTGACTAAGGGCatcgctggcattggaaaaacggTGTCTGTGCAAAAACTTATCCTGGACTGGGTGTGTATAGACTGTGTGTTCCTTTTTCCATTTCGAGAGATAAACACGTTAAAAGACAGAGAGGTCAATCTACATGAGTTTCTACAGGTATTCTATCCTAAACTGAAGGAATTGGAAAAATCTATTAAAGTAAAGTTATACAACAAAtgtaatctatttatttttgatggacTTGACGAGAGTCGACTTCCTTTTAGCTTTAACAGTGGAATTCTGCCTAATTGTGAGGAAAAATCATCTGTAGATGTGCTGTTTATAAATCTGGTAAAAGGAACATTGCTTCCATCAGCTCTTGTCTGGGTGACATcacgaccagcagcagccaatcagatccctccTCAGTATGTGGGTTTGTTCACAGAGGTGCGAGGATTCACTGACCAACAGAAGGAGGAGTACTTCAGAAAGAGATTCACAGATGAGAGTCTGTcctccagaatcatctcacacattaagacgtctcgtagtctctacatcatgtgccacattcctgtgttctgctggatcacagCCACAGTACTTCAGGATATTCTCATCAAAAACAGTGCAGAGAACATCAGCACAACactcactgaaatgtacattcacttcctgCTGATACAGATGAACATGAAGAACCAGAAGTATGATGAACAAGAAGAAAGACAAGGCACAAAGCTCTTACTTTTAAATAGAGAAATGATTCTGAAGTTAGCCAAGCTTGCATTTGAACAGCTGAAGAAAGGAAACATTGTGTTCTATGAGAAAGATTTAGAAGAATGTGGTATAGATGTGAGTAAAGGCACTGAGTTCACAGGAATGATCGCTGAGATCTTTAAGATGGAAGATGGACTTCATGAGACGAAAGTCTTCTCCTTTGTGCATCTGAGTGTTCAGGAGTTTCTtgctgcagtgcatgtgttCATCTGTTACCTGAACAAGGACATGCAGGagcttcagtttttctttgacaagccaaaaaaaaatgttacattgcaGGAGCTACTGCAGAaggtggttgataaagccttgAAGAGTCAGAGAGGACACCTTGACCTGTTCCTGAGGTTTCTGATGGGTGTTTCACTGAAATCTAGTGAAAACCTGCTCCAAGGCCTGATTACACACACTGAAGACACCACAGAGAGcatcaaaaaaacaactaaatacattaaacaagtACAAAATGGGTACTTCATCTCAGATGAAGCTTCTGTCAATCTATTCTACTGCTTGCTTGAGCTCAAAGATCATTCATTATATGAGGAAATCCAGAGTTACctcagttcaaatgaacatccaGGAGATCTCTCATCTTCAATGTGCACAGTGTTGACCTACATACTACTGATGTCTGAGAAGGTGCTGGATGAGTTCAACCCAAAGAGATTCACAACATCTTCAAATTACACCAGACTGGTTTCTGCTGTTAGATGCTGCCGAAAAGCCCTaTTAAATGGTTGTGATCTCTCTGGCCAGCACTGTGAAGTTTTTTGTTCTGctctacaatcatcaaactctCATCTGAGAGAACTGGATCTGAACAACAATCACCTAAAGGATTtaggagtgaagctgctttctgcTGGCCTGAAGAGTTCACACTGTCAACTAAACATACTAAGGCTATCTGGGTGTAAACTCACAACTCAGTCCTGTGAAAGATTGTCTTTAGCTCTGCAGtcctcaaactctgtcctgagagagctggacctaagtaacaatgacctgcaggattctggAGTGGAGCATCTCTCAGATGCACTGAAGAGCTGTAAGCTGGAGATACTGAGACTTTCCATATGTAAACTCACTGGTCAGTCCtgtgaaagtttgtcttcaTCTCTACAATcttcaaactctgtcctgagagagctggacctgagtaacaatgatctgGAGGACtctggagtgaagctgctttcgGATGGACTGAAGAACTGTAAGCTGGAAATACTGAGATTTTCtacatgtaatctcactgctCAGTCTGTTGAGAGTTTATCATTAGCTTTACAGTCATCACACTCCCATCTGAAAGAACTGGATGtaagtaacaatgacctgcaggattcaggagtgaagcttctttctgatggactgaagagtcaAAACTGTAAGctggagattctgagAttgtctggctgtatggtgacagagaaaggctgtggttatgtgtcttcagctctgacttcaaacccctcacacctgagagagctggatctgagctacaatcatcctggagattcaggagtgaagattctctctgaaaaactggaggatccaaactgcACACTGGCAAAACTCAAtgTGGATCACGGAGGAGAGATcaggattacagcaggactacaaaaatATGCTTGTTctctcacactggatccaaacacagcaaacactcAACTCATTCTGTCCGAGGAGAACAGAAAGGTGACACATGTGGAAGAAGATCATTATATAATAAGATTCGATGCGtgtcaggtgttgtgtagacAGAGTTTGTGTGGACACTATTACTGGGAGATCGAGTGGAGTGGAGATAATGGTGTGTTTATATCGGTGTTGTATAAGAGCATTCACAGCTACGGACAGAGTTGTAAGCGTTGGTTTAGACAtgatgatcagtcctggagtttgatctGCTCTCCCTACAGTtactcattcagacacaataaCATAGTGACTGATCTAAATGTGAAGCCCATCAGCAGCAGAACAGATCTGTTCGATAAGATTTTTAGAATAGCAGTGTTTGTGGACCACAGTGCAGGAACTCTGGCCTTCTACAGCATCTCTGACACGATGAGCCTCATCCATGCAGTCCACACAACATTCACTCAACCGCTCTATGCTGGGTTTATCGTTTATCCTGGGTCATCAGTGGaactgtgttgatgaatgaGAACAGACTGAGGAGAGATTCTACCCATTATACTTCTacacattatacacattatACTAGATGTGTGATAAATCAGTAGCAGTAAGATGTCTTGTGTATGACCTTGCCTGTTTACTCTGACCACTGTCTCTTCGGATCACACTTGTATTCCTGTAACCTGTTCGGATTGATATTTGTGTCACGACCATTGCCTGTATTATTGTCTGTGCTATCTGGAAATCCCTTGAACTTGTTTGCCGATCGGACTGCTTAACTGCCTGTTGTATTTTACTCCTCTCTGAGGGACTGTCCCAATAAACCTCCATCAGTCATCAGCATCCTCAAAACAATCAGTCACAATgctattgtaatatgtaaattTTACCCAGATTTGctccaaatgattcatttaataaagatatttttcttaaatgcctCTGGAAA

Function

GO: NA

KEGG:

id description
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237169.1 True 4221 mRNA 0.41 13 24607037 24619391

Neighbor

gene id symbol gene type direction distance location
LOC122342982 NA coding upstream 1220 24595853 ~ 24605817 (+)
LOC122343010 NA coding upstream 25243 24577163 ~ 24581794 (+)
LOC122343032 NA coding upstream 32605 24568994 ~ 24574432 (+)
LOC122343045 nots,LOC107677818,LOC107569115,LOC107725781 coding upstream 104907 24498607 ~ 24502130 (+)
cct2 cct2 coding upstream 109457 24493077 ~ 24497580 (+)
LOC122343105 NA coding downstream 29576 24648967 ~ 24653215 (+)
LOC122343093 NA coding downstream 42438 24661829 ~ 24665576 (+)
LOC122343104 NA coding downstream 48315 24667706 ~ 24672151 (+)
LOC122342991 LOC107685875,LOC107570416,LOC107671223,LOC107749047,LOC107728228,LOC107569032 coding downstream 60531 24679922 ~ 24687980 (+)
LOC122342420 LOC107667978,LOC107563545 coding downstream 151241 24770632 ~ 24782341 (+)
G30812 NA non-coding upstream 120150 24456022 ~ 24486887 (+)
LOC122343172 NA non-coding upstream 187469 24417843 ~ 24419568 (+)
G30819 NA non-coding upstream 292749 24310339 ~ 24314288 (+)
G30754 NA non-coding upstream 597146 24003642 ~ 24009891 (+)
G30751 LOC107671223,LOC107569100,LOC107575457,LOC107747635,LOC107679413,LOC107566978,LOC107670352 non-coding upstream 605473 23978432 ~ 24001564 (+)
G30877 NA non-coding downstream 95306 24714697 ~ 24714998 (+)
G31223 NA non-coding downstream 369476 24988867 ~ 24989274 (+)
G31226 NA non-coding downstream 694832 25314223 ~ 25314596 (+)
G31228 NA non-coding downstream 695788 25315179 ~ 25315553 (+)
G31380 NA non-coding downstream 1167989 25787380 ~ 25787901 (+)
LOC122343023 LOC107568558,LOC107685877,LOC107725785,LOC107728057 other upstream 135587 24465454 ~ 24471450 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other upstream 140637 24454270 ~ 24466400 (+)
LOC122342990 NA other upstream 465591 24133050 ~ 24141446 (+)
LOC122342976 usp15,LOC107685889 other upstream 475550 24117289 ~ 24131487 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other upstream 1439030 23163695 ~ 23168007 (+)
LOC122343159 NA other downstream 16961 24636352 ~ 24638654 (+)
LOC122343125 NA other downstream 19698 24639089 ~ 24646601 (+)
LOC122343086 NA other downstream 53500 24672891 ~ 24674412 (+)
G30882 NA other downstream 102033 24721424 ~ 24728447 (+)
LOC122342408 NA other downstream 124457 24743848 ~ 24767552 (+)

Expression


Co-expression Network