LOC122342947


Basic Information

Item Value
gene id LOC122342947
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22325510 ~ 22334793 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237170.1
AAAGAAGTGAAAGCAGAAGTTGAGTTGAACATTCAGTGTTCACACTTgaccgttttatttttaaaaactgatctTTATTATTTGCTGATCTGAAAATTTACATGGACCTAATGAAGAAACCAAGGACATATTGAGAACTTGTCTAAAAACCGAACGTCTTGATCAAAGCAAATCTTGAGCTGTGGAGCGCAAAGTCACTTCCTTATTCAAcTGTGAGTTGTTGAAGGAAGATGGCGTTTGTTAAAGAGCTGCTCGTGGATTCACTGAAGCAGCTGGTAGACGCTGAACTAAAGGAGTTTCACTGGCGCCTAATGAATGCACATAAGCATATATCCAAGTCTGAAATGGAGAAGGCAGATAGATTCGACACAGTAGATAAGATGGTGGTGTGTTTTGGAGCAGAAGAAGCTGTGGAGGTCATGGTAGACATCCTCAGAAAGATGAAACAAAATGATCTGGCTGAACGGTTGGTGAAAGAACACAAGCAAGCTAAGACTGAGGGCGACGTGAATATATCTGTTGCTACTGGAGagctgaaaagcttttttgaaactcacaaaaaaaacatgaagaagaaagcagaatgtatttttgagggcaaaaaagaaaatgaagcacaaCTCAAGGCTGTTTACACAGAACTGTTCATCACAGAGGGAGATATGGAAGATGTCAATCACGAACATGAGATTCAACAGATCGATGGTGCTTTAAAGCGTagaaaaacacaggaaaaacCAATTAAATGCAATGATATATTCACTGAACTTAGGAAAAATAACAAGAAGAAGATTGTGCTGACCAAGGGAGTCGCTGGgattggaaaaacagtctctgtgcaAAAATTTATCCTGGACTGGGCAGAAGGAACAACCAATCCGGATATACACTGTGTTTTCCTgcttccattcagagagatCAACATTATTAAAGACCGAGAGGTCAATCTACATGAGTTTCTGCTGAAATTTTATCCTGAATTGAAGAACCTAGAGAAATCAAAGCTATATGAGGAATATAAgcttgtatttgtatttgatggacttgatgagAGTCAACTGCCATTGAACTTTAAAAGTGAAACATTGAACACGTTTGAGGAACGAGCATCTGTAAATGTGGTCTTTACAAGTCTGGTCAAAGGTAAACTGCTTCCATCAGCTCTTGTCTGGGTGACATCACGACcatcagcagccaatcatcctcCTCAGTATGTAGGTTTGTTCACAGAGGTGCGAGGATTCACTGACCAACAGAAGGAGGAGTACTTCAGAAAGAGAATCAAAGATGAGAGTCTGTCCTCCAGAATCATTTCACACATTAAGACATCTCGTAgtctctacatcatgtgccacattcctgtgttctgctggatcacagCCACAGTACTTCAGGATATTCTCTCTGAGAACAATGAAGAGAACATCAACACAACactgactgaaatgtacattcactttCTGCTGATACAGATGGACATGAAGAACCAGAAATATGATGAACAAGATGAAAGAGAACGTACAGAGCACTTACAATTAAATAGAGAGATGATTGTGAAGTTAGCCAAGCTAGCATTTGAACAGCTGAAGAAGGAACAGATTGTGTTCTATAAGGACGATCTGAAAGCATGTGGTATTGATGCGAGCAAAAGAACTGAGTTCACAGGAATGATCGCTGAGATCTTCAAAAGGGAAAACAGACTTCATGGAGCAAAGATCTTCTGCTTTGTGCATCTGAGTGTTCAAGAGTTTCTtgctgcagtgcatgtgttCCTCTGTTACCTGAACAAGAACATACGAGagcttcagtttttctttgatAATCCAGACAAAAATCTCACATTAGAGAAGTTACTGCAGAAAGCCAGAAAAGCCATGGAGAGTCATAGAGGACATCTGGATCTGTTCCTGCGATTTCTGTTGGGCATTTCACTGAAATCCAGTCAAATCCTGCTCAAaggcctgatcacacacactgaagacaCTACAGAGAGCATCACAAGAATAAGTgaatacattaaacaaaaacaaaatgagtaCAATATCTCAGATGAAGCTTTAGTCAACCTGTTCTACTGCTTACTTGAGCTCAAAGATCATTCATTATACGAGGAAATCCAGAGGTACctcagttcaaatgaacatccaGGAAGAAAACTCTCATCTTCAATGTGCACAGTCTTGACTTATGTATTGCTGATATCAGAGAAGGTGCTGGATGAGTTCAACCCGAAGAGATACACATCAAAACGAGCGGATATCAAGAGACTCATTCCAGCtgtgagatgctgcagaaaagctctATTTGACGGCTGTGGTTTTGATGACAAATGCTGTGAAATTATGTCTTCGGCTCTTCAATCATCAAACTCTTATGTGAGGAatctggacctgagtaacaatgacctgcaggattcaggagtgaagctgctttctgatggactgaagagtccacaCTGTCAACTGAACATACTGAGACTTCCCATctgtaatctcactgcacagtCTTGTGGGAGTttatcttcagttttacaatcctcaaactctgttctgagagagctggacttgagtaacaatgacctgcaggattcaggagtgaagcttctttctgatggactgaagagtccaaactcaAAGCTGGAGATTTTAAGattttccacatgtaatctcactgcacagtcttgtgggagtttgtcttcagttttacaatcctcaaacactgtcctgagagagctggacctgagtaacaatgatctgcaggattcaggagtgaagctgctctctgaaggactgaagagtccaaactcaAAGCTGGAGATTTTAAGATTTTCCATATGTAATCTCACTACACAGTCTTGTGagagtttgtcttcagttttacaatcctcaaactctgtcctgagagAACTGGACCTGAGTagcaatgacctgcaggattcaggagtgaagctgctttctgaaggactgaagagtttAAACTCCAAGCTGGAGACAATGAGgttgtctggctgcatggtgacagaggaaggctgtaattatttgtcttcagctctgacttcaaacccctcacacctgagagagctggatctgagctacaatcatcctggagattcaggagtgaagctgctctctgaaaaactggaggatccaaactgctcACTGAATAAACTCAACGTTGATCATGGAGGAGAATCCAGGATTACAACAGGACTGAAGAAATatgagtgttttctcacactggatccaaacacagcacacactaaaCTCAGACTGTCTGAGGACAACAGAAGAGTAACATTTGTGTTTGAGTCTCAGccatatcctgatcatccagacagatttaaAATGTCTCAGGTGTTGtgtggagagagtgtgtgtggacgctgttactgggagactgagtggagTGGGTTTGTGGATATATCGGtgtcatataagaacatcagcagaAGGAGAggtgatgagtgtgtgtttggacgTAATGATCAGTTGAGTTTGATCTGCTCTCGCTACAGTTACTCATTCATACACAATAACAGAGAGACTAATTtctctgtgaagcccatcaTCATCAGCAGAAGACCAGAAGTGTATGGTAATGATAATATCTATAGAACAGGAGTGTATTTGGATGAGAGCGCAGGGATTCTGTCGttctacagcgtctctgacacaatgagactcatccacacagtccagaccacattcactcagacactctgtcctgggttttatcttttttttggatcatcagtgaaactatgttgatgaatcagaagagactgagCAGAGATTCTACCCATAATGCTTTGAGCATGATTGATGAAGAACATGTAATcaatttctgttatttttgtatagaaataaaaatactaaaaaaaataaagataaatcgACTTGATATCAGATTTTAATCAATGTTTGTATCATGAATATAACTGATTTTTGACAAGA

Function

GO:

id name namespace
GO:0042116 macrophage activation biological_process
GO:0002274 myeloid leukocyte activation biological_process
GO:0002376 immune system process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237170.1 True 3953 mRNA 0.41 15 22325510 22334793

Neighbor

gene id symbol gene type direction distance location
LOC122343126 si:ch211-232d10.1,LOC107747635,LOC107569099,LOC107698614,LOC107574820 coding downstream 5413 22315908 ~ 22320097 (-)
LOC122343076 LOC107718513,LOC107692125 coding downstream 86503 22235757 ~ 22239007 (-)
LOC122343106 NA coding downstream 446718 21870415 ~ 21878792 (-)
LOC122342306 LOC107749047,LOC107728228 coding downstream 465226 21847120 ~ 21860284 (-)
LOC122342303 NA coding downstream 544891 21775098 ~ 21780619 (-)
LOC122342948 LOC107575457,LOC107741609 coding upstream 51070 22385863 ~ 22395600 (-)
LOC122343006 NA coding upstream 94281 22429074 ~ 22431623 (-)
LOC122343060 LOC107677814 coding upstream 160493 22495286 ~ 22499529 (-)
LOC122342313 LOC107703281,LOC107657504,LOC107693510,LOC107570418 coding upstream 233431 22568224 ~ 22577494 (-)
LOC122342314 LOC107575554,LOC107666720 coding upstream 243553 22578346 ~ 22585463 (-)
G30465 NA non-coding downstream 44321 22280672 ~ 22281189 (-)
G30423 LOC107575420,LOC107667978,LOC107563545 non-coding downstream 515892 21676876 ~ 21809618 (-)
G30425 NA non-coding downstream 649379 21673723 ~ 21676131 (-)
LOC122343179 LOC107667978,LOC107563545,LOC107741456 non-coding downstream 652086 21668810 ~ 21673424 (-)
G30408 NA non-coding downstream 825512 21499638 ~ 21499998 (-)
G30499 NA non-coding upstream 24424 22359217 ~ 22421953 (-)
LOC122343195 NA non-coding upstream 61725 22396518 ~ 22398023 (-)
G30506 NA non-coding upstream 90799 22425592 ~ 22428757 (-)
G30518 NA non-coding upstream 151982 22486775 ~ 22487119 (-)
G30520 NA non-coding upstream 152627 22487420 ~ 22488169 (-)
G30450 NA other downstream 80350 22128454 ~ 22245160 (-)
G30457 NA other downstream 109040 22216035 ~ 22216470 (-)
LOC122343153 NA other downstream 541919 21387853 ~ 21783591 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other upstream 1082098 23416891 ~ 23437015 (-)
G31017 NA other upstream 1143732 23478525 ~ 23546369 (-)
G31050 NA other upstream 1410693 23745486 ~ 23771768 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other upstream 1775431 24110224 ~ 24110673 (-)
G31134 NA other upstream 1969303 24304096 ~ 24497596 (-)

Expression


Co-expression Network