LOC122342951


Basic Information

Item Value
gene id LOC122342951
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20790175 ~ 20800541 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237174.1
aaatggatccgacCGCCTCAGACCACTCATTTGTGACAGAATGCTACATCAAACCAGGATCCAGCAGCTTTTCACctgaaccatggccagGGCATAAATCAACCACTCAAGATGGAACTTGCTTGTGAAATATCACCCCGTTCCTTCCTGCTCCGCCCTGTAGGCTCTCTGCTCCGCACAGTATGGCTGTAATCCTCTGATTCACATGTCTTCGTCTAGTTTTAACTTGCtctgtaaaagtaaaaagtttcAGAGCTGTACAATACAACACTGTTCAGAGGACGAAGAAGAAAGATCCGCACATGATCTGAAAACTTCCGATCAAGACCCAGCTAACTGGAGAAACGAGAAATATCTGCTTCATCTTTATTCATGCCATGAGTTGAAGGATGATGGCGTTTGTTAAAGAGCTGCTCGTGGATTCACTGAAGGAGCTGGTACAAGCTGAACTGAAGGAGTTTCATTGGCGCTTAATGAATGCATATCATAAGCATATCTCAAAGTCTGAAATGGAGAAGGCAGATGTATTAGACACAGTAGATAAGATGGTGGTGTGTTTTGGACCAGATGAAGCTGTGAAGGTCACGGTAGACATCCTGAGAAAGATGAACCAAAATGATCTGGTTGATCAGTTGGTGAAAGAACACAAACAAGCTCAGACTGGGGACAATGTGAATATATCTGTTGAGGTTGGAGagctgcaaaactttttggaaactcacaaaacaaacatgaaggagaaaacagaatatatttttgaggGCAACAAAGACAATGAAGCACAACTCAAGGCTGTTTACACTGAACTATTCATCACAGAGGGAGATATGAAAGATGTTAATCACGAACATGAGATTCTGAAGATTGATGATGCcttcaagaacaaaaaaacacagaacaaaccaatcagatataatgatatatttactgaactgaggaaaaacaatgacaaaaagaTTGTGCTGACTAAAGGAGTcgctggaattggaaaaacagtctctgtgcacaagttcatcctggactgggcaGAAGGAAAATCTAACCAGGATATACACTGTGTGTTCCTGCTTTCATTCAGAGAGATTAACTTAATGACAAATGAAGATTTCAGTCTTCATGAGCTTCTGCTGGAATTTTATCCTGAACTGAAGGACTTGGAGAAATCAAAGCTATATACAGAATGTAAGctagcatttatatttgatggactTGACGAGAGTCGCCTGCCtctaaattttaaaagtagatcACTGAACACTGTTGAGAAAAAAGCATATGTGGATGTGCTCTTTACAAGTCTGGTCAAAGGGACTCTGCTTCCATCAGCTCTTGTCTGGGTGACATcacgaccagcagcagccaatcagattcctcCACGGTATGTGGGTTTATTCACAGAAGTGCAAGGATTCACTGACCAGCAGAAAGAGGAGTACTTCAGAAAGAGATTCACAGATGAGAGTCTGTCCACCAGAATCATTTCACACATTAAGACGTCTCGTAgtctctacatcatgtgccacgTTCCGGTGTTCTGCTGGATTACAGCCACAGTACTTCAGGATATTCTCACTGAGAACAATGAAGAGAACATCAGCACAACactcactgaaatgtacattcacttcctgCTGATACAGACGGACATGAAGAACCAGAAATATGATGAACAAGAAGAAAGAGAATGTATAGAGTgcttacaattaaataaagagattattttaaagttagCTAAATTAGCATTTGAACAACTAAAGaaggaaaacattgtgttctatAAGGAAGATCTAAAAGCATGTGATATTGATGTGAGTAAAGACACTGAGCCCACAGGAATGATTGCTGAGATCTTCAGAAGGGAACACAGACTTCATGGAGCAAAGGTCTTCTGCTTTGTGCATCTGAGTGTTCAAGAGTTTCTCGCTGCATTGCATGTGTTCATCTGCTATCTGAACAAAAACATGCAGGagcttcagtttttctttgatgGGCCAGAAGAAAATGTGACATTAGAAAAGTTACTGCAGAAGGCCATTGATAAAGCCATGGAGAGTCAGATAGGACATCTGGACCTGTTCCTGCGTTTTCTGATGGGAATTGCACTGGAATCCAGTCAAAACCTGCTCAAAGGCCTGATCACACATGCTGAAGACACCACAAAGATCATCATAAACATAAGtgaatacatgaaaaaacaaaacgagtACATTATTTCAGATGAAGCTCTAGTAAACTTATTGTACTGCTTACTTGAGCTCAAAGATAACTCATTAAATGAAGAAATCCAGAAATACCTCAGTTCAGATGAACATCCAGGAAGAGATCTCTCATCTTCAATGTGTACAGTGCTGACCAACATACTGTTGATGTCAGAGAAGGTGCTGGATGAGTTCAACCCAAAGAGGTTCACATCAGAACAATCAGACTACAAGAGACTCATTCCAGCtgtgagatgctgcagaaaAGCCCTatttgacggctgtggttttgatgaaacatgctgtgaaaCTGTGTCTTCTGCTCTACAATCATCAAATTCTCATCTGATAGAGCTGGACCTGAGCAGCAatcacctgcaggattcaggagtgaagctgatttatgatggactgaagagttcacactgtcgactgaacatactgagGCTTTGTGGCTGTAGTCTCACTTCTCAGTCCTGTGAAAGATTGTCATTATCCctacaatcatcaaactctgtcctgagagagctggacctgagtaacaatgacctgcaggactCAGGAGTAAAGCTTCTGtatgatggactgaagagtccaaactctaAGATGGAGATTTTAAGattttccacatgtaatctcactgcGCAGTCTTGTGGGAGTTTGTCATCAGTTTTAGAAtcatcaaactctgtcctgaaagagctggacctgagtaacaatgacttGCAGGACTCAGGAGTAAAGCTtctttctgatggactgaagagtccaaactgtaaGCTGGAGATACTGAGGTTTTCTGGCTGTATGGTCACAGAGAAAGGCTGTTATTATGTGTCTTCAGCTTtgacttcaaacccctcacatctgaaagagctggatctgagctacaatcacccgggagattcaggagtcaagctgctctctgaaaaactggagggTCCACTGAACAAACTCAAAGTTGATCATGGAGGAGAAtccaggattacagcaggactCAAGAAATatGCATGTTttctcacactggatccaaacacagcgcACACTGATCTCcgtctgtctgaggagaacagaaaggTGACGTATGTGCTTGAGTCTCAGtcatatcctgatcatccagagagatttaatgatgtttatcaggtgttgtgtagagagagtgtgtgtggacgctgttactgggagatcGAGTGGAGTGGAGGTGTGtctatatcagtgtcatataagagcATCAGCAGGAAGGGAGGTGATGACTGTGTGTTTGGAaataatgatcagtcctggagtttggaCTGCTCTCCTGACGGTTACTCATACAGACACAATAACAGAGAGATTAATTTCCCTGTACagcccatcatcatcatcagaagaagaagatcaGGAGTGTCTGATAATATCAGAAGAACAGGAGTGTATGGTAATATCGctagagtaggagtgtatgtggatgagagcgcaggaactctgtccttcttcagcgtctctgacacaatgagactcatccacacagtccagaccacattcactcagacactctgtcCTGGGTTTACCGTTTATTATGGATCATctgtgaaactgtgttgatgaatcagaagagactgatgagATTCTACCCAGAATGCTTTGAGCTGTGTAATGAAACAGTAATGGTGAGATATTATGAGCCTCTTCATGACATTAATACCGCAGCACAAAAgtgatatataaatagatataaatgcCAAAATAAATGTGTCAGAGATAAAAGGTTACTGTAAGTAACAATGCTGGTATCCAACTGCCAgtaattaaattagatttactTGACAGTAATAGCTTTACTGTATATTACTAACAGTATCAGTACAGtagagtttattttcatttattgaaaaatgttttacctgtaaaaatataaaaataaacaattttaattgtGGGACAGAACTGCAAACCATCACAACCCCCCCAAAATCACAACaactcattcatttaaattagacAGAGGTCCTGAAACACTGCCACACTCTCTAGCATCATTGTCTGCAGTATCGCAAAGATGCCCATGGTGGTCTTCTCAGTGGCACTCTGTAAAAGATCTTCCGTGTCCTAAAGATGAATATGTATTTAACATGTGAACAAGAAATATGTACCTTACTAGtcaaatcatttttagaaaatggcAGTGCTTACAGTGACCCCAATCTACTATCTTGTCCTATTAAAAGGcataatgcaaattattttaaagaaaggaccatcatttgttattttacattatgtttAACTTAACTACAAAAATGCTGTTATCCTTATGAAAACTGTTTATTCAAGAGTGCTATTAGtatacttattttaaacttaaaataggAAAGTATACTCTTAGTTTACTTTTATGTACATCTCAGAAATATGCTTAAAATTACATAAGTATACTTAACTTATActtagtatataatatatttattatatactttttatatttatttatatttatactttatattataactTCATTACACAATTTCCAAAACACAAGCAAGGAAGAAACATTCTTCCAACAGCATAAAACAGCATCAAAACTCTGACTCtgactgacaaaaaaatgttatggaATAAAATGTTGATCCATGAAGAGAATAATGACGGACAAACTTTGGGCTGTTGATCGACTTCATCTGCATTTTGTTTATCATTATGAATCCATTCCATTCTATTCcattttttagctttttgttcaaatattcgtaaaacaacatatatacaAATGAATACCTAGATGTAACCCGTATTAACTGCCGttaatatggatttaaataaagGCGTAATCAACATAGCTGATGAAAAATAGCGATTGTCTCTTTAAGAATGAGTGGCAGCAGTGAGTCAAGCCCCGCCTATCTTTTCTTGGTAGAGCGCGCCAGAGAGAAAATTCTCGATTCTCTTAGAGTGGGAAGAGGCAGCTACAAGAAGGATCTCCTAATCCTTCTTTGTAAGTGACTTAATTAGGGAAAAATGACCAGATATTACAGAAATCGTGATTTCTGAAGCTGAAATTCTAATGTGAAGGAGCTGTCGTCGGAGAGCTAAGCGGACGAGACGAGATTTACAGAACTGCAGAGTTAAAAAGTGCCACAAAAGAGCTccttgaatatatttatttatccctTGGtgagattgatttaaatgtcTTGATAAAACTTGATATCTGTATCAGAAAAGTGCCGCTGATTTAATAGTTGATTGTAAGATAGAAGTAGACCACGTGAGCTGaaactgacataaaaaataatgagattTAACTTAGTATCAAAAGTTATTCAAGTGCTATAGTGTTTAATAAGTTTTGGAGTGTCGAATTAATATCGTAAAAATTCAATTTAACGCTGAAACTATTGAAAGTTTATTGTTTTGCCCTGCCCCTCCTCCCTCCCTTGTGAAATCAGAGATCCCTGACGATTCTTGATTCCCGTTTCAAGATGAACGCCGTTTAATACGAGGCGAGCCATTTCTATGTTGAACTGTTTTGAGCCTATTGTGTTACATACtatataataagaaatctgaacactattgatttttgtaaaaaaattattttattttcctcttttatttttctctgtgtatttgtgtactCGATCTGCTGAATCCATGCACCTGTGAAATCCAAAAAGAGCAGTTGTTATTACTTACTGTACTTCTActaattgttaattttaaattttcaaatacagaaagttaaacacaaaaaatgactTTGTGGATTGTTCACTCACCTGTTGTGCTGTTCTCTTCTCTCCAGTAGCCGTGCCCTTCTTCTGA

Function

GO:

id name namespace
GO:0004198 calcium-dependent cysteine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237174.1 True 6002 mRNA 0.39 13 20790175 20800541

Neighbor

gene id symbol gene type direction distance location
LOC122342964 NA coding upstream 112266 20655215 ~ 20677909 (+)
LOC122343085 LOC107561645,LOC107566978,LOC107748257,LOC107741456 coding upstream 145383 20640142 ~ 20644792 (+)
LOC122342277 LOC107741474 coding upstream 151564 20633884 ~ 20638611 (+)
LOC122343005 NA coding upstream 231161 20543132 ~ 20559014 (+)
LOC122342276 NA coding upstream 274546 20505411 ~ 20515629 (+)
LOC122343111 NA coding downstream 101678 20902219 ~ 20906726 (+)
LOC122343116 NA coding downstream 117009 20917550 ~ 20918689 (+)
LOC122342280 NA coding downstream 120894 20921435 ~ 20929163 (+)
LOC122342283 NA coding downstream 217611 21018152 ~ 21020872 (+)
LOC122343014 NA coding downstream 239239 21039780 ~ 21044018 (+)
G30005 NA non-coding upstream 4645 20785309 ~ 20785530 (+)
G29947 LOC107709565,LOC107727338,LOC107575420,LOC107569100 non-coding upstream 144640 20645257 ~ 20645535 (+)
G29945 NA non-coding upstream 158846 20630820 ~ 20631329 (+)
G29927 LOC107681551 non-coding upstream 292307 20497097 ~ 20497868 (+)
LOC122343178 NA non-coding upstream 327833 20459370 ~ 20462342 (+)
G30003 NA non-coding downstream 79908 20880449 ~ 20882908 (+)
G30024 NA non-coding downstream 109613 20910154 ~ 20975778 (+)
G30025 LOC107561645 non-coding downstream 112017 20912558 ~ 20934912 (+)
LOC122343171 NA non-coding downstream 170969 20971510 ~ 20972249 (+)
G30056 NA non-coding downstream 317120 21117661 ~ 21118522 (+)
G29961 NA other upstream 83329 20696672 ~ 20706846 (+)
G29921 NA other upstream 421359 20367675 ~ 20368816 (+)
LOC122342270 NA other upstream 443451 20344346 ~ 20346724 (+)
LOC122343063 NA other upstream 746722 20037933 ~ 20043453 (+)
G29835 NA other upstream 1004047 19731262 ~ 19786128 (+)
G30058 NA other downstream 318021 21118562 ~ 21142831 (+)
LOC122342286 LOC107578117 other downstream 368652 21169193 ~ 21174340 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other downstream 568102 21368643 ~ 21761181 (+)
G30119 NA other downstream 587652 21388193 ~ 21630120 (+)
G30115 NA other downstream 838999 21639540 ~ 21641756 (+)

Expression


Co-expression Network