LOC122342961


Basic Information

Item Value
gene id LOC122342961
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18823925 ~ 18832593 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237200.1
TCGAAACTGAAAGTAAGAGCTTCAGTGTCGAGAAGCCGTTCCAGATCGCTGCACAGCAAAACTTACACATTCTATCATATTTGCTGTGTTTCCAAATGCAGAACTGAAATGTCTGTGGAGACCCAGAAAAGCAATGGTGAggtgagagaggaggaggaggatgttGTTCACTGCCAGAACCAGATCGTGGCATCTCCGGATCCCAGCTGTGTGTCCATGAAGAGTAATGCATCCGTAAATCTGCCTCCTGTTTTCAGGGATGAAACCGCGAACTCTGACCTCAGTGTCTCCTCAGAGTCTAGCTGTGTGTCTATAAAGAGTGACGGATCCATAAATCTGCCTCCTGTTTTCAGTGATGGAGCAGTGACCTCTGGCCTCAGtGTGAAAAAGAATGTTCCTGTCCAGCATCAGTTAAAATGTGGAGTTTGTGACCAGGTTCTGAAAGACCTAATCTCTATCACCTGTGGACACAGTTTTTGCAGAAACTGCATCTGTTGCTATTGGAAAAGGTTCGGTTCATCAGAAAACTTTGCCTGTCCTCGATGTAGAAAGagatctagaacacagcctgtTCTAGAAACACATAAAATCACAGGAGGAGCCAACCTGCCAAATCCCAGTAATGACAAGAAGCATGATTCTGATCAACCAGTATATGATAAACTGCAAAGAGTCAAAAACCAACACAAAACAAGTATGAAGAACAATTATGAGAGATTATTTGAGGGAATCAAACTACAAAAGAATCAAACTCTGCTGAATAAAATCTACACACAACTTTACATcatagagggagagagtgaaggggtgaatgaagaacatgaggttTTGCAGATGGAGACAACACATAGAGCACAAGACAGTCCAATCTTGTGCAATAACATCTTTAAACCCTCACCTAATCGAGTATATaaggaaaaagacaaaattaaaacCGTTCTTACTAAAGGCATTGCTGGAATTGGTAAAactgtctctgtgcagaagttcattctaGAATGGGCAgagggaaaagccaatcaagatgtagatttcatgtttgtgcttccatttcgagagctgaacttgattAAAGATCACCAGTACAGTCTTCAAAAACTTATTCTTGACTTTTATCCTGAACTTCAAGATCTGGACTTAAAGATTTATGATGAATGCAAAGTTTTGTTTATCTTTGATGGcctggatgaaagcagaattacactgatgttttcagacAGTACAAAATTTTCTGATGTGACCGAGACTTCATCAGTGGATGTATTGATGTCAAACCTCATTAAAGGAGAgctgcttccctctgctctcatctggatcacgtccagaccagcagcagccagtTTGATCTCCACCAAATACATTGACCGTATGACAGAAATTTAGGGATTCACTGACCCCCAGAAAGAAGAATATTTCAGGAAGAAAATCACTGATGAGCAGCAAGCCAACAGAATCATCTCTCACATTAAAAGGTCAAGAAGCctccacatcatgtgccacatacCAGTCTTCTGTTGGATCTCAGCCACCGTGCTTGAAAACATTCTAAATAAAGATCTCTGTGCAAAAATCCCTCAAACTCTTACTGAAATGTATATCCACTTTTTGATGATTCAGCTAAACATGAGACATCAGAAGTATGAAAAGAGTGATCCAGAGAAACTCATTCAATCCAACAGAGAAACAATCATAAAACTTGCTGAACTGGCTTTTAAACAACTGATGAAGGGTAATGTCATGTTCTATGAGGAGGACCTGACAGAGAGCAAAATAGACATTACCGATGCCtcagtgtattctgggatttgCACTGAAATCTTTAAGGAGGAATCTGTGATTCATCAGAGAAAAGTCTACTGCTTTATACATCTGAGCTTTCAAGaattttttgcagcatttttcacatttgtctcatttttacaaaataacagTAAGGTTCTGAAATTGTTTCTAAGGGGAAAATCCAAAACTCAGTCTGAGAAACTTCATCTGGATATAATTCTGAAAGGAGCAATAAACAAAGCCCTGACAAGTAAACATGGACATCTGGATCTTTTTTTGCGGTTTCTGATGGGAATCTCATTGGATTCCAATCAGAAACTCTTACAGGAtctactgacacacacagaaaacacctCAGAGAGCATTAACAAAGTGATCCAGCATATCAAGAAAGTTCAAAAAAAGAATGCTTGTCCTGAACGATGGATAAATCTCTCACACTGCTTGCTTGAAATCAAGGATAAATCTCTGTTTGAAGAAATCAAGAGTTTCTTGAGTTTcggaaacaaaaacaaaaccctttCTCTTTTACAATGTTCAACTTTGGCAAACATGATCTTGTCGTCAGAGGAAGTAATGGATGAGTTAGATCTTGGAAAGTATAACATAAAATCAAGAGATGGTCAACAGAGGCTGCTACCTGCTATTaaaaactgcagaaaagctctatgtgcAAGCTGTAACCTTACTGATCAGTGTGGTGAAACTCTAGCATCAATTCTACAATCACCAAACTCCTGTCTGAGAGAACtagacctgagtaacaatgacctacAGGactcaggagtgaagctgctctctacTGGACTGAAAAGTCCCAACTGTAAACTGGAGATACTTAGattGTCTGGCTGTATGTTGACATCGGAGAGCTGTTGTTatctggcttcagctctgagttTAAACCCATCACATCTGAGAGAGTTGGATCTGAGCTTCAATCACCCAGGAGAAACAGGAGTCAAGATGCTCTCTGAGACAATGAACAATCCTAAAAGCACATTGGAGATGCTTAACATGAATCATAGAGGAGAGATCAGGATTACACCTGGACCTCGAAAATATGCCCTTGATCTCACAATGGAACCAAATACAGCTCAcacttatcttgctctgtctgaggagaacaagGTGTTGACGTACATGAGAGATGAGCAGCCGTATCCTCATCATCAAGAAAGATTTGATCATCACCCCCAGGTTCTGTGTAGAGAGAGTCTCtctggacgctgttactgggaggctGAATGGTGTGGAGATGCTGATATATCAGTGGCATATAAAGGAATCAACAGGAAAGGAGAGAGTAATGACTGTGTGTTTGGATGCAATAAAAACTCCTGGAGTCTTTACTGCTCTAATAACAGGTTTATCGCCCGTCACAATAATAAGAAAACCGACATACGTGTCCCTTCGGGCTCTTCTAATAGAGTAGGAGTGTATCTGGATGTGCCAGGTGGCACCCTGTCCTTCTACAatgtctctgacacacacaagctaacacacttacacacattcacCTCCACGTTCACTAAAAACCTCTATGCTGGATTTGGTCTTTATTTCCTCAGCTCCGTGTCTCTGTGTCAGATTTCTGTTTGAGACAACAAACCCACGTCTAAAACAACGCTGATTGTATTTGGACCTTCTCCATTTCAAATGGGCCATTTTGAACATTCTTCAAGTCTCCATTACAAagtttaattttagaaatatttatatacaattattgaTAGTCCCTATTTACAACTGAAAAGCAACCTAGGCCTACTACTTATTATAACGAAAAAATGCGATCAGTGTGACTGAGCCAATCAGCTATGCGAGTTATGCAATTCATAAATCACTAATCTGTTCTTTACGCACACTATCTAAATAATAGATCCATTATGCAGCGTAGAGagctttaattgatttaaatggaACTTCTAAAGTTTATTAGGAAAGTCTGCTAATATAATATTGATTCAGAAATGGAAGAATTCATTAAACAAGATGTAAATATTAAGTGTTTTACATTGTACAACTATAACAGTATTGCCTGATTTTGATCTATTTAGTCAATAAAAGTCTcaattaaaacatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237200.1 True 3868 mRNA 0.40 8 18823925 18832593

Neighbor

gene id symbol gene type direction distance location
LOC122343011 NA coding upstream 9331 18810860 ~ 18814594 (+)
LOC122343102 LOC107747636,LOC107554732 coding upstream 13962 18805450 ~ 18809963 (+)
LOC122342235 LOC107685875,LOC107749047 coding upstream 41115 18758554 ~ 18782810 (+)
LOC122342234 LOC107685386,LOC107554769,LOC107712902 coding upstream 168820 18646798 ~ 18655105 (+)
si:ch211-166e11.5 LOC107685387,LOC107554747,LOC107712904 coding upstream 176997 18634109 ~ 18646928 (+)
LOC122343055 LOC107554755,LOC107730198,LOC107663244 coding downstream 33260 18865853 ~ 18869783 (+)
LOC122343078 LOC107730199 coding downstream 62308 18894901 ~ 18897790 (+)
LOC122342974 NA coding downstream 76323 18908916 ~ 18915022 (+)
LOC122343048 LOC107698963 coding downstream 86007 18918600 ~ 18922510 (+)
LOC122343092 NA coding downstream 101114 18933707 ~ 18937665 (+)
G29633 NA non-coding upstream 8647 18814883 ~ 18815278 (+)
G29627 NA non-coding upstream 38679 18785045 ~ 18785246 (+)
G29600 NA non-coding upstream 158842 18662860 ~ 18665083 (+)
G29591 NA non-coding upstream 220609 18600428 ~ 18603316 (+)
LOC122343196 NA non-coding upstream 229809 18591447 ~ 18594116 (+)
LOC122343164 NA non-coding downstream 70642 18903235 ~ 18907824 (+)
G29777 NA non-coding downstream 99726 18932319 ~ 18932690 (+)
G29797 NA non-coding downstream 134794 18967387 ~ 18967714 (+)
G29803 NA non-coding downstream 213117 19045710 ~ 19053414 (+)
G29809 NA non-coding downstream 247175 19079768 ~ 19080189 (+)
G29545 NA other upstream 362608 18436460 ~ 18461317 (+)
G29526 NA other upstream 522736 18300415 ~ 18301189 (+)
atp5mj NA other upstream 1783095 17038419 ~ 17040830 (+)
G28982 NA other upstream 2349544 16473898 ~ 16474381 (+)
G28899 NA other upstream 2838199 15985219 ~ 15985726 (+)
G29642 NA other downstream 50586 18883179 ~ 18886402 (+)
G29814 LOC107660256 other downstream 457627 19290220 ~ 19342911 (+)
G29835 NA other downstream 898669 19731262 ~ 19786128 (+)
LOC122343071 NA other downstream 913141 19745734 ~ 19750074 (+)
LOC122343063 NA other downstream 1205340 20037933 ~ 20043453 (+)

Expression


Co-expression Network