LOC122342965


Basic Information

Item Value
gene id LOC122342965
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22613115 ~ 22621886 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237204.1
AAGGCAGATAGATTCGACACAGTAGATAAGATGGTGGTGTGTTTTGGAGCAGAAGAAGCTGTGGAGGTCATGGTAGACATCCTGAGAAAGATGAAACAAAATGATCTGGCTGAACGGTTGGTGAAAGAACACACGCAAGCTAAGACTGAGGGCGACGTGAATATATCTGTTGCTACTGGAGagctgaaaagctttttgaaactcacaaaaaaacatgaagaagaaagcagaatgtatttttgagggcaaaaaagaaaatgaagcacaaCTCAAGGCTGTTTACACAGAACTGTTCATCACAGAGGGAGATATGGAAGATGTCAATCACGAACATGAGATTCAACAGATCGATGGTGCTTTAAAGCGTagaaaaacacaggaaaaacCAATTAAATGCAATGATATATTCACTGAACTTAGGAAAAATAACAAGAAGAAGATTGTGCTGAAAGGAGTCGCTGGgattggaaaaacagtctctgtgcaAAAATTTATCCTGGACTGGGCAGAAGGAACAACCAATCCGGATATACACTGTGTTTTCCTgcttccattcagagagatCAACATTATTAAAGACCGAGAGGTCAATCTACATGAGTTTCTGCTGAAATTTTATCCTGAATTGAAGAACCTAGAGAAATCAAAGCTATATGAGGAATATAAgcttgtatttgtatttgatggacttgatgagAGTCAACTGCCATTGAACTTTAAAAGTGAAACATTGAACACGTTTGAGGAACGAGCATCTGTAAATGTGGTCTTTACAAGTCTGGTCAAAGGTAAACTGCTTCCATCAGCTCTTGTCTGGGTGACATCACGACcatcagcagccaatcagatccctccTCAGTATGTAGGTTTGTTCACAGAGGTGCGAGGATTCACTGACCAACAGAAGGAGGAGTACTTCAGAAAGAGAATCAAAGATGAGAGTCTGTCCTCCAGAATCATTTCACACATTAAGACATCTCGTAgtctctacatcatgtgccacattcctgtgttctgctggatcacagCCACAGTACTTCAGGATATTCTCTCTGAGAACAATGAAGAGAACATCAACACAACactgactgaaatgtacattcactttCTGCTGATACAGATGGACATGAAGAACCAGAAATATGATGAACAAGATGAAAGAGAACGTACAGAGCACTTACAATTAAATAGAGAGATGATTGTGAAGTTAGCCAAGCTAGCATTTGAACAGCTGAAGAAGGAACAGATTGTGTTCTATAAGGACGATCTGAAAGCATGTGGTATTGATGCGAGCAAAGAAACTGAGTTCACAGGAATGATCGCTGAGATCTTCAAAAGGGAAAACAGACTTCATGGAGCAAAGATCTTCTGCTTTGTGCATCTGAGTGTTCAAGAGTTTCTtgctgcagtgcatgtgttCCTCTGTTACCTGAACAAGAACATACGAGagcttcagtttttctttgatAATCCAGACAAAAATCTCACATTAGAGAAGTTACTGCAGAAAGCCATTGAAAAAGCCATGGAGAGTCATAGAGGACATCTGGATCTGTTCCTGCGATTTCTGTTGGGCATTTCACTGAAATCCAGTCAAATCCTGCTCAAaggcctgatcacacacactgaagacaCTACAGAGAGCATCACAAGAATAAGTgaatacattaaacaaaaacaaaatgagtaCAATATCTCAGATGAAGCTTTAGTCAACCTGTTCTACTGCTTACTTGAGCTCAAAGATCATTCATTATACGAGGAAATCCAGAGGTACctcagttcaaatgaacatccaGGAAGAAAACTCTCATCTTCAATGTGCACAGTCTTGACTTATGTATTGCTGATATCAGAGAAGGTGCTGGATGAGTTCAACCAGAGATACACATCAAAACGAGCGGATATCAAGAGACTCATTCCAGCtgtgagatgctgcagaaaagctctATTTGACGGCTGTGGTTTTGATGACAAATGCTGTGAAATTATGTCTTCGGCTCTTCAATCATCAAACTCTTATGTGAGGAatctggacctgagtaacaatgacctgcaggattcaggagtgaagctgctttctgatggactgaagagtccacaCTGTCAACTGAACATACTGAGACTTCCCATctgtaatctcactgcacagtCTTGTGGGAGTttatcttcagttttacaatcctcaaactctgttctgagagagctggacttgagtaacaatgacctgcaggattcaggagtgaagcttctttctgatggactgaagagtccaaactcaAAGCTGGAGATTTTAAGattttccacatgtaatctcactgcacagtcttgtgggagtttgtcttcagttttacaatcctcaaacactgtcctgagagagctggacctgagtaacaatgatctgcaggattcaggagtgaagctgctctctgaaggactgaagagtccaaactcaAAGCTGGAGATTTTAAGATTTTCCATATGTAATCTCACTACACAGTCTTGTGagagtttgtcttcagttttacaatcctcaaactctgtcctgagagAACTGGACCTGAGTagcaatgacctgcaggattcaggagtgaagctgctttctgaaggactgaagagtttAAACTCCAAGCTGGAGACAATGAGgttgtctggctgcatggtgacagaggaaggctgtaattatttgtcttcagctctgacttcaaacccctcacacctgagagagctggatctgagctacaatcatcctggagattcaggagtgaagctgctctctgaaaaactggaggatccaaactgctcACTGAATAAACTCAACGTTGATCATGGAGGAGAATCCAGGATTACAACAGGACTGAAGAAATatgagtgttttctcacactggatccaaacacagcacacactaaaCTCAGACTGTCTGAGGACAACAGAAGAGTAACATTTGTGTTTGAGTCTCAGccatatcctgatcatccagacagatttaaAATGTCTCAGGTGTTGtgtggagagagtgtgtgtggacgctgttactgggagactgagtggagTGGGTTTGTGGATATATCGGtgtcatataagaacatcagcagaAGGAGAggtgatgagtgtgtgtttggacgtaatgatcagtcctggagtttgatctGCTCTCGCTACAGTTACTCATTCATACACAATAACAGAGAGACTAATTtctctgtgaagcccatcaTCATCAGCAGAAGACCAGAAGTGTATGGTAATGATAATATCTATAGAACAGGAGTGTATTTGGATGAGAGCGCAGGGATTCTGTCGttctacagcgtctctgacacaatgagactcatccacacagtccagaccacattcactcagacactctgtcctgggttttatcttttttttggatcatcagtgaaactatgttgatgaatcagaagagactgagCAGAGATTCTACCCATAATGCTTTGAGCATGATTGATGAAGAACATGTAATcaatttctgttatttttgtatagaaataaaaatactaaaaaaaataaagataaatcgACTTGATATCAGATTTTAATCAATGTTTGTATCATGAATATAACTGATTTTTGACAAGA

Function

GO:

id name namespace
GO:0042116 macrophage activation biological_process
GO:0002274 myeloid leukocyte activation biological_process
GO:0002376 immune system process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237204.1 True 3604 mRNA 0.41 12 22613115 22621886

Neighbor

gene id symbol gene type direction distance location
LOC122343138 si:ch211-133h13.1,LOC107574515,LOC107574820 coding upstream 51352 22548617 ~ 22561763 (+)
LOC122343018 LOC107705900 coding upstream 166837 22434054 ~ 22446278 (+)
LOC122342312 NA coding upstream 207293 22404053 ~ 22405822 (+)
LOC122343041 zbtb24,LOC107736039 coding upstream 505658 22105236 ~ 22107457 (+)
LOC122343067 NA coding upstream 508183 22103318 ~ 22104932 (+)
LOC122343101 NA coding downstream 63816 22685702 ~ 22689679 (+)
LOC122342996 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding downstream 73914 22695800 ~ 22706494 (+)
LOC122342997 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding downstream 118074 22739960 ~ 22748620 (+)
LOC122343008 LOC107575457 coding downstream 546269 23168155 ~ 23183546 (+)
LOC122343131 NA coding downstream 604325 23226211 ~ 23229732 (+)
LOC122343204 NA non-coding upstream 61765 22550101 ~ 22551350 (+)
LOC122343169 NA non-coding upstream 69284 22542511 ~ 22543831 (+)
LOC122343193 NA non-coding upstream 71630 22540384 ~ 22541485 (+)
G30528 LOC107574372,LOC107655767,LOC107710146,LOC107574376,LOC107571418,LOC107574588 non-coding upstream 80083 22532415 ~ 22533032 (+)
G30526 NA non-coding upstream 106923 22505255 ~ 22506192 (+)
G30598 NA non-coding downstream 182152 22804038 ~ 23246017 (+)
G30599 LOC107561645 non-coding downstream 186102 22807988 ~ 23249868 (+)
G30607 NA non-coding downstream 231595 22853481 ~ 22869703 (+)
G30609 NA non-coding downstream 236404 22858290 ~ 22861570 (+)
G30624 NA non-coding downstream 385088 23006974 ~ 23126523 (+)
LOC122342310 LOC107685875,LOC107671223,LOC107749047,LOC107728228,LOC107576424 other upstream 307967 22296897 ~ 22305148 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other upstream 381191 22231470 ~ 22231924 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other upstream 851934 21368643 ~ 21761181 (+)
LOC122343019 LOC107705900 other downstream 39940 22661826 ~ 22682712 (+)
LOC122342317 NA other downstream 156097 22777983 ~ 22780139 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other downstream 507220 23129106 ~ 23130189 (+)
G30632 NA other downstream 535673 23157559 ~ 23159756 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other downstream 541809 23163695 ~ 23168007 (+)

Expression


Co-expression Network