LOC122342984 (LOC100150651,LOC107755845,LOC107668749,LOC107599606)


Basic Information

Item Value
gene id LOC122342984
gene name LOC100150651,LOC107755845,LOC107668749,LOC107599606
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 17854701 ~ 17880796 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237240.1
TTGTCACGTGTGTACATTTGTTTCCTAACTGAAGGTTTAGTCTAAAAGGTATACGTACGGCGCTACTGAGCATGCGCACATCAAGACGAcgtattttttataaaacgcaatataatagaaaaaaaaacaaacaggcaaAGAAGGCGGTGCCGTTCTTCCTCATTGGTTGGAGATCCGCGCTCTGATTGGACGTCCGCCGGCGCTATGTTAATGAGCGGGCGGGGCCTCGCCAAGTGAGTAGGTGACGTCAGCTTCTCATTCCGCAGAAGCGAAACAAACATGGCGACAGAATGGAGCGGTGAAGGCAGCACGCTAACTTTATTACTGATCTTCTGGATCGGGATGTCTTCTAGCCGAGCGCAGTCCCCGGGCAGCGACAGTCGGATCCTCGGCATGCGGCTGGAGAGCAGCGTCAAGCCCGCCTCCACCACCGACGACGGGATCATCCAGGTGACCGAGGAGAGCGACATCCAGCTCCGCTTCTACGGGCTGCAGATCAGCAACGACACCTGGGAGCGGATCAAGTTCGTGGAGCAGAGCGAGGAGTCCAACAGCACCTGCGCCGACTTCACCAAAGACATCTCCATCACGACCGGCATGGCCGTCCAGAGCCAGGGCACCTCTGGGGTCCTGGGGCTCAGAATCAAACCGCTTCGGAAGAGCGAGTCGCGCCGGGATTACGCGCTGTGCGTCAGGCGCAGCCCGGGAGGGAAGTGGGTCCTCCTCGGGGAAAACGACGGAAAGTTGCGCGTGGTGGAGGAGAAGAAGTCCCTCCTTCCCGTCTGGTTCCAGGTGATCTTAATATCCTGCCTTCTGGTTCTGTCGGGGATGTTCAGCGGGTTAAACCTGGGTCTAATGGCGCTGGATCCCATGGAGCTGCGCATCGTCCAAAGCTGCGGTACcgagaaagaaaagaagtaCGCGAGCAAAATCGAGCCGATCCGGCGGAAGGGAAACTACTTGCTCTGCTCGCTTCTCCTGGGGAACGTGCTGGTGAACACCACCCTCACCATCCTCCTGGACGACCTCATCGGGTCCGGGCTGGTGGCCGTTATCGCGTCGACCATCGGCATCGTCATCTTCGGCGAGATCGTCCCTCAGGCGCTCTGTTCCCGCCACGGCTTGGCGGTTGGCGCGAACACCATTCACCTCACCAAGTTCTTCATGCTGCTGACTTTACCGCTTTCTTACCCCATCAGCAAGCTCCTGGACTGCGTTCTGGGTCAGGAGATCGGCACCGTGTACAACCGAGAGAAGCTGGTGGAGATGCTGAAGGTGACCGCGCCGTATAACGACTTGGTGAAGGAGGAGGTGAACATGATCCAGGGCGCGCTGGAGCTGAGGACCAAGACGGTGCAGGACATCATGACCCCGATAAACGACTGCTTCATGATCAACAGCGACGCGGTGCTGGACTTCAACACCATGTCTGAGATCATGGAGAGCGGCTACACGAGGATCCCCGTCTACGAGGACGAGCGGAGCAACATCGTGGACATCCTCTTCGTCAAAGACCTCGCCTTCGTGGATCCGGATGACTGCACGACGCTGAAGACCATCACCAAGTTCTACAACCATCCGGTGCACTTCGTGTTTCACGACACCAAGCTGGACTCCATGCTGGAGGAGTTCAAGAAAGGTAAATCCCACCTGGCCATCGTTCAGAAGGTGAACAGCGAGGGCGAGGGAGACCCGTTCTACGAGGTGCTGGGATTGGTCACGCTGGAGGACGTCATCGAGGAGATCATCAAATCAGAGATCCTGGACGAGTCGGACCTCTACACTGATAACCGCAGCAGGAAGAAAGTGGCCCACAATAAGAACAAGCGGGACTTCTCTGCCTTCAAACACGAGAGCGAGTCCAAAGTGAAGATCTCTCCTCAGCTGCTGCTGGCCGCTCACCGCTTCCTGGCCACAGAGGTCAACCTGTTCAGTCCGTCTCAGATCTCAGAGAAAGTGCTTCTGCGTATCCTGAAGCACCCCGACGTGATCCAGGAGATCAAGTTCAACGAGAACGACAAGAAGTCAGCGCATCACTACCTGTACCTGCGCGGCAAAGCCGTGGACTTCTTCATCCTCGTCCTGCAGGGCCGTGTGGAGGTCGAGGCTGGGAACGAGAACATGAAGTTTGAGACGGGGCCCTTCTCTTACTACGGAGTCATGGCCCTCAGCACTCCCACGCtagtcAGTGTCTCTCGTCCTCATCACCTGTCTCTTAAGAGATGCTCTCTCTTCTCTCGGTTCCCAGAGTTTCGCTCTCCGTCTCACGTCGGTGGACTGAACCGCTCGGCGTCTCTGAGCTGCACGGAGCGACCCGAGCCTCCGTCCGTCAGCGGCAGTAACACGCAGCTCAGCTCCGCTCCGCAGTACACTCCTGACTTCAACGTCCGGGCGCTCGCCGACCTGCAGATCGTCAAGATCACTCGCTCTCAGTATCAGAACGGGCTGATGGCGTCTCGTCTGGACAGCTCTCCTCAGTCTCCGGACAGCGGACACGGTCACGTGGACAGCGGCACACCGGCTCTTCATCCGTCTTCAGAAAACATCACTCCTGTGGACGAGACCACCTCGCTGCTCAACGAACAGAACAGCCAGGCGCCGCTCACATAACCCCGCTTCCCACAATCCCCCTGGACATCAAGCACTTTCCACAGAACTGTTAATCAGAGCCCTTTAGCgccagcagtgtgtgtgtgtgtgtgtgtgtgagagcagtCGATGGCGGACGTGTTTCATGAAGACGTTGTGTAACACATTGtgcaagatgaaaaaaaaaaaaactaaggcGCCAAAGTGTATCTGGACCGAGAACGAGCCCTGCTTCAGGAGTTTATAGACTTTCTAGAGATGAAGAggtttattttgtcatttttctatTGAGCTTGATCAGAAAAGTCAACGAGGGAAACTGCAgatgcctttttattttatcttagtCCATAGTTCATTTGACcaaattctgtgtgtgtgtgtgtgagagagagagaggagtgtgtgtgtcatgcatgcacatacgtgtgtgtgagtgattgacATGCattcatgcgtgtgtgtgtgtgtgtgtgtgtgtgtatttgtgtgtg
>XM_043237241.1
aaaaaaaacaaacaggcaaAGAAGGCGGTGCCGTTCTTCCTCATTGGTTGGAGATCCGCGCTCTGATTGGACGTCCGCCGGCGCTATGTTAATGAGCGGGCGGGGCCTCGCCAAGTGAGTAGGTGACGTCAGCTTCTCATTCCGCAGAAGCGAAACAAACATGGCGACAGAATGGAGCGGTGAAGGCAGCACGCTAACTTTATTACTGATCTTCTGGATCGGGATGTCTTCTAGCCGAGCGCAGTCCCCGGGCAGCGACAGTCGGATCCTCGGCATGCGGCTGGAGAGCAGCGTCAAGCCCGCCTCCACCACCGACGACGGGATCATCCAGGTGACCGAGGAGAGCGACATCCAGCTCCGCTTCTACGGGCTGCAGATCAGCAACGACACCTGGGAGCGGATCAAGTTCGTGGAGCAGAGCGAGGAGTCCAACAGCACCTGCGCCGACTTCACCAAAGACATCTCCATCACGACCGGCATGGCCGTCCAGAGCCAGGGCACCTCTGGGGTCCTGGGGCTCAGAATCAAACCGCTTCGGAAGAGCGAGTCGCGCCGGGATTACGCGCTGTGCGTCAGGCGCAGCCCGGGAGGGAAGTGGGTCCTCCTCGGGGAAAACGACGGAAAGTTGCGCGTGGTGGAGGAGAAGAAGTCCCTCCTTCCCGTCTGGTTCCAGGTGATCTTAATATCCTGCCTTCTGGTTCTGTCGGGGATGTTCAGCGGGTTAAACCTGGGTCTAATGGCGCTGGATCCCATGGAGCTGCGCATCGTCCAAAGCTGCGGTACcgagaaagaaaagaagtaCGCGAGCAAAATCGAGCCGATCCGGCGGAAGGGAAACTACTTGCTCTGCTCGCTTCTCCTGGGGAACGTGCTGGTGAACACCACCCTCACCATCCTCCTGGACGACCTCATCGGGTCCGGGCTGGTGGCCGTTATCGCGTCGACCATCGGCATCGTCATCTTCGGCGAGATCGTCCCTCAGGCGCTCTGTTCCCGCCACGGCTTGGCGGTTGGCGCGAACACCATTCACCTCACCAAGTTCTTCATGCTGCTGACTTTACCGCTTTCTTACCCCATCAGCAAGCTCCTGGACTGCGTTCTGGGTCAGGAGATCGGCACCGTGTACAACCGAGAGAAGCTGGTGGAGATGCTGAAGGTGACCGCGCCGTATAACGACTTGGTGAAGGAGGAGGTGAACATGATCCAGGGCGCGCTGGAGCTGAGGACCAAGACGGTGCAGGACATCATGACCCCGATAAACGACTGCTTCATGATCAACAGCGACGCGGTGCTGGACTTCAACACCATGTCTGAGATCATGGAGAGCGGCTACACGAGGATCCCCGTCTACGAGGACGAGCGGAGCAACATCGTGGACATCCTCTTCGTCAAAGACCTCGCCTTCGTGGATCCGGATGACTGCACGACGCTGAAGACCATCACCAAGTTCTACAACCATCCGGTGCACTTCGTGTTTCACGACACCAAGCTGGACTCCATGCTGGAGGAGTTCAAGAAAGGTAAATCCCACCTGGCCATCGTTCAGAAGGTGAACAGCGAGGGCGAGGGAGACCCGTTCTACGAGGTGCTGGGATTGGTCACGCTGGAGGACGTCATCGAGGAGATCATCAAATCAGAGATCCTGGACGAGTCGGACCTCTACACTGATAACCGCAGCAGGAAGAAAGTGGCCCACAATAAGAACAAGCGGGACTTCTCTGCCTTCAAACACGAGAGCGAGTCCAAAGTGAAGATCTCTCCTCAGCTGCTGCTGGCCGCTCACCGCTTCCTGGCCACAGAGGTCAACCTGTTCAGTCCGTCTCAGATCTCAGAGAAAGTGCTTCTGCGTATCCTGAAGCACCCCGACGTGATCCAGGAGATCAAGTTCAACGAGAACGACAAGAAGTCAGCGCATCACTACCTGTACCTGCGCGGCAAAGCCGTGGACTTCTTCATCCTCGTCCTGCAGGGCCGTGTGGAGGTCGAGGCTGGGAACGAGAACATGAAGTTTGAGACGGGGCCCTTCTCTTACTACGGAGTCATGGCCCTCAGCACTCCCACGCtagAGTTTCGCTCTCCGTCTCACGTCGGTGGACTGAACCGCTCGGCGTCTCTGAGCTGCACGGAGCGACCCGAGCCTCCGTCCGTCAGCGGCAGTAACACGCAGCTCAGCTCCGCTCCGCAGTACACTCCTGACTTCAACGTCCGGGCGCTCGCCGACCTGCAGATCGTCAAGATCACTCGCTCTCAGTATCAGAACGGGCTGATGGCGTCTCGTCTGGACAGCTCTCCTCAGTCTCCGGACAGCGGACACGGTCACGTGGACAGCGGCACACCGGCTCTTCATCCGTCTTCAGAAAACATCACTCCTGTGGACGAGACCACCTCGCTGCTCAACGAACAGAACAGCCAGGCGCCGCTCACATAACCCCGCTTCCCACAATCCCCCTGGACATCAAGCACTTTCCACAGAACTGTTAATCAGAGCCCTTTAGCgccagcagtgtgtgtgtgtgtgtgtgtgtgagagcagtCGATGGCGGACGTGTTTCATGAAGACGTTGTGTAACACATTGtgcaagatgaaaaaaaaaaaaactaaggcGCCAAAGTGTATCTGGACCGAGAACGAGCCCTGCTTCAGGAGTTTATAGACTTTCTAGAGATGAAGAggtttattttgtcatttttctatTGAGCTTGATCAGAAAAGTCAACGAGGGAAACTGCAgatgcctttttattttatcttagtCCATAGTTCATTTGACcaaattctgtgtgtgtgtgtgtgagagagagagaggagtgtgtgtgtcatgcatgcacatacgtgtgtgtgagtgattgacATGCattcatgcgtgtgtgtgtgtgtgtgtgtgtgtgtatttgtgtgtg
>XM_043237242.1
TTTAaggacatttatattatttattattaacagtgTTTATTCAGCTGCTGGAAATCTAAAGAAAAGATGCTGTTTTAAAGAGTtgtgttttttgattattttcccCTATGATGTAATATCTAAACTGTTATTCCTTTACCAGGTCAGTTTCAGGTTACGGTTTAAAacgaaagataaaagaaaaactatgatTCAAATAGTTGTCACGTGTGTACATTTGTTTCCTAACTGAAGGTTTAGTCTAAAAGGTATACGTACGGCGCTACTGAGCATGCGCACATCAAGACGAcgtattttttataaaacgcaatataatagaaaaaaaaacaaacaggcaaAGAAGGCGGTGCCGTTCTTCCTCATTGGTTGGAGATCCGCGCTCTGATTGGACGTCCGCCGGCGCTATGTTAATGAGCGGGCGGGGCCTCGCCAAGTGAGTAGGTGACGTCAGCTTCTCATTCCGCAGAAGCGAAACAAACATGGCGACAGAATGGAGCGGTGAAGGCAGCACGCTAACTTTATTACTGATCTTCTGGATCGGGATGTCTTCTAGCCGAGCGCAGTCCCCGGGCAGCGACAGTCGGATCCTCGGCATGCGGCTGGAGAGCAGCGTCAAGCCCGCCTCCACCACCGACGACGGGATCATCCAGGTGACCGAGGAGAGCGACATCCAGCTCCGCTTCTACGGGCTGCAGATCAGCAACGACACCTGGGAGCGGATCAAGTTCGTGGAGCAGAGCGAGGAGTCCAACAGCACCTGCGCCGACTTCACCAAAGACATCTCCATCACGACCGGCATGGCCGTCCAGAGCCAGGGCACCTCTGGGGTCCTGGGGCTCAGAATCAAACCGCTTCGGAAGAGCGAGTCGCGCCGGGATTACGCGCTGTGCGTCAGGCGCAGCCCGGGAGGGAAGTGGGTCCTCCTCGGGGAAAACGACGGAAAGTTGCGCGTGGTGGAGGAGAAGAAGTCCCTCCTTCCCGTCTGGTTCCAGGTGATCTTAATATCCTGCCTTCTGGTTCTGTCGGGGATGTTCAGCGGGTTAAACCTGGGTCTAATGGCGCTGGATCCCATGGAGCTGCGCATCGTCCAAAGCTGCGGTACcgagaaagaaaagaagtaCGCGAGCAAAATCGAGCCGATCCGGCGGAAGGGAAACTACTTGCTCTGCTCGCTTCTCCTGGGGAACGTGCTGGTGAACACCACCCTCACCATCCTCCTGGACGACCTCATCGGGTCCGGGCTGGTGGCCGTTATCGCGTCGACCATCGGCATCGTCATCTTCGGCGAGATCGTCCCTCAGGCGCTCTGTTCCCGCCACGGCTTGGCGGTTGGCGCGAACACCATTCACCTCACCAAGTTCTTCATGCTGCTGACTTTACCGCTTTCTTACCCCATCAGCAAGCTCCTGGACTGCGTTCTGGGTCAGGAGATCGGCACCGTGTACAACCGAGAGAAGCTGGTGGAGATGCTGAAGGTGACCGCGCCGTATAACGACTTGGTGAAGGAGGAGGTGAACATGATCCAGGGCGCGCTGGAGCTGAGGACCAAGACGGTGCAGGACATCATGACCCCGATAAACGACTGCTTCATGATCAACAGCGACGCGGTGCTGGACTTCAACACCATGTCTGAGATCATGGAGAGCGGCTACACGAGGATCCCCGTCTACGAGGACGAGCGGAGCAACATCGTGGACATCCTCTTCGTCAAAGACCTCGCCTTCGTGGATCCGGATGACTGCACGACGCTGAAGACCATCACCAAGTTCTACAACCATCCGGTGCACTTCGTGTTTCACGACACCAAGCTGGACTCCATGCTGGAGGAGTTCAAGAAAGGTAAATCCCACCTGGCCATCGTTCAGAAGGTGAACAGCGAGGGCGAGGGAGACCCGTTCTACGAGGTGCTGGGATTGGTCACGCTGGAGGACGTCATCGAGGAGATCATCAAATCAGAGATCCTGGACGAGTCGGACCTCTACACTGATAACCGCAGCAGGAAGAAAGTGGCCCACAATAAGAACAAGCGGGACTTCTCTGCCTTCAAACACGAGAGCGAGTCCAAAGTGAAGATCTCTCCTCAGCTGCTGCTGGCCGCTCACCGCTTCCTGGCCACAGAGGTCAACCTGTTCAGTCCGTCTCAGATCTCAGAGAAAGTGCTTCTGCGTATCCTGAAGCACCCCGACGTGATCCAGGAGATCAAGTTCAACGAGAACGACAAGAAGTCAGCGCATCACTACCTGTACCTGCGCGGCAAAGCCGTGGACTTCTTCATCCTCGTCCTGCAGGAGAACAAACGGCTCTCATTTTCCTTGCAGCCTGGAAGCCGGTGGAGAGTGTTTTCTCACGCTTCAGTCTCCTCTTTATCTAGAGCAATAGTTCACCTGTGTTTGGCATCATTTCTTAccccaaaaaaaactaaaggagGGATGGAAGCGCTGGAGCTTAAgagacttgtttaaaaaaagtaccagttttcattttactttttaattctaTGTTGGTTTGGTTGTGGATTTTTtgaatatctaatatttcttatattaatatactttttaaattggaCATATTATGCCCctctttacaaaatgtattatacatcTCCAGAACGTGTCTGAAGATACAGCTCAAAGTACCCTGCGGATCATTTATTATatggttatatatttattatattgtttagaGTGAATCAGAAACACTTTTTggtgcctgtttctttaaatgcaaatgagcttttgCTGCCCGCCCCTTTTGACCAGAATAGAGCTGAGTCTTTATCTCATTTCGGTTCTGATTATCATGTTGATTatctgaaatgattttaaagcatattagtTATGTTTTTCTGAGTGGATACATGTAAAGCACAGGGACAGAGCGTCTGGCACCGAgttctcacagacacacacagacacacacagacacacacagacacacacacacacacacacacacacacacacac

Function

NR:

description
metal transporter CNNM4 isoform X2

GO: NA

KEGG:

id description
K16302 CNNM; metal transporter CNNM

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237240.1 True 3083 mRNA 0.55 8 17854701 17880596
XM_043237241.1 False 2901 mRNA 0.56 7 17854701 17880477
XM_043237242.1 False 2965 mRNA 0.50 5 17861583 17880796

Neighbor

gene id symbol gene type direction distance location
ckap2l NA coding downstream 3552 17840064 ~ 17851149 (-)
LOC122343038 LOC107698808,LOC107743352 coding downstream 123304 17728522 ~ 17731397 (-)
LOC122342227 NA coding downstream 127905 17720148 ~ 17726796 (-)
LOC122343057 NA coding downstream 134911 17717764 ~ 17719790 (-)
LOC122343083 NA coding downstream 137650 17713746 ~ 17717051 (-)
dqx1 dqx1,LOC107597950 coding upstream 3923 17884719 ~ 17898867 (-)
thnsl2 thnsl2,LOC107597948,LOC107578849,LOC107735618 coding upstream 22780 17903576 ~ 17912432 (-)
smyd1a smyd1,LOC107745315,LOC107597934 coding upstream 34775 17915571 ~ 17926697 (-)
spra LOC107597947 coding upstream 46991 17927787 ~ 17932419 (-)
rab14l Rab14,rab14,LOC105889591,LOC107566859,LOC101069277,LOC103390174,LOC103045876,LOC107670386,LOC107674917,LOC107729136 coding upstream 82793 17963589 ~ 17969568 (-)
LOC122343170 NA non-coding downstream 24758 17828586 ~ 17829943 (-)
G29445 NA non-coding downstream 30437 17823219 ~ 17824264 (-)
G29442 LOC107599601 non-coding downstream 32231 17819360 ~ 17822470 (-)
G29440 NA non-coding downstream 36768 17817562 ~ 17817933 (-)
G29425 NA non-coding downstream 49292 17796072 ~ 17805409 (-)
G29487 NA non-coding upstream 104217 17985013 ~ 17985818 (-)
G29656 NA non-coding upstream 500194 18380990 ~ 18409895 (-)
G29662 NA non-coding upstream 554849 18435645 ~ 18465837 (-)
G29663 NA non-coding upstream 555771 18436567 ~ 18461313 (-)
G29680 LOC107747644,LOC107709964,LOC107690747,LOC107687572,LOC107562152 non-coding upstream 675704 18556500 ~ 18559281 (-)
LOC122342228 scgn,LOC107693759,LOC107757885,LOC107669120,LOC107714763,LOC107747999,LOC107663245 other downstream 110158 17734606 ~ 17744543 (-)
G29417 NA other downstream 118427 17735350 ~ 17736274 (-)
srd5a3 srd5a3,LOC107755245,LOC107683999,LOC107665336,LOC107601910 other downstream 215959 17637023 ~ 17638742 (-)
xrcc3 xrcc3,LOC107755221,LOC107683971,LOC107560377 other downstream 732572 17118343 ~ 17122129 (-)
G29135 NA other downstream 836878 17006927 ~ 17017823 (-)
G29473 NA other upstream 89809 17970605 ~ 17979922 (-)
G29653 LOC107663329,LOC107575399,LOC107749046,LOC107758217,LOC107576964,LOC107665206,LOC107571858,LOC107671223,LOC107576424 other upstream 527764 18408560 ~ 18428343 (-)
LOC122343054 NA other upstream 774448 18655244 ~ 18661653 (-)
LOC122342944 LOC107581743 other upstream 812206 18693002 ~ 18735640 (-)
LOC122343082 NA other upstream 1018011 18898807 ~ 18902552 (-)

Expression


Co-expression Network