ptprr (ptprr,LOC107684538,LOC107709966,LOC107690749,LOC107747646)


Basic Information

Item Value
gene id ptprr
gene name ptprr,LOC107684538,LOC107709966,LOC107690749,LOC107747646
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18526006 ~ 18544653 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237251.1
GATTCCCCAAACGGATCCTCTCGGCGCTTGGAGAGACGCGTCGGGGTGTGTGATCCTTAGCAGATGCAGATTTATTGTATTAAACAGCCATCGTTTCGGCTTCTTAACCACAGAGACGCCGCGGCCCCGACTGGTTTCCATAAAGCCACAATGCGTTTGTAGTGCAAGAAGAATCATGTTCGCGGCGTTAGTCCTCGTTTCTTCATTGATGGGGTTGCGCGTCACAGGGGGCGTCTTTGCGGACGATGAAGTTTATCGGATACCGCATCGGCGCTTGGCTAATGGATTGACTGGCTCTGCCTACCAACACATGGGTGTTCTCAGTCAGGAAAAGCCTTTGGGATTCAACGGGGAGCTGCTTCAGGTCCAGTCCCGTGGACGGGTGGCTAAGCTGTTTCTAGAATCCCATTTCCAGAGAACTCCGCAGAGGAAATCAGATGCCGGCTTCCTGCAAAGCGTCGACCAGGCGGAGAGCAAGCCTGCATCTGCCCACCATACGGTCGAAATGGAGGAGAATGATGACATCGAGCTGTATGTGTCGTCTGTTGGAGCATCAGAACCTGTGGCTCACGAGGAAATGATCCGGTTGCTCAACATCAACACGCTTCACCACAGCCCTGGGCTGCCTGCCACCACTGAAGCGTCCACTGAGAAGACTGTTTTCAAAGATCACCATGAGAAGAACGGCATTTGGGGTAAAGACGGCTTCTATGTGCTGGTTATCTGCCTCACAATATTCATCATCGTTTTCACCTGTTTAATGGTGCTTTACCGAATAAAGGAGAAGGAATTCTTGGATCATCAGCTAAAAGACCCGTCCCAGCCTATCCGGGACGTGCAGCTGGCACCCATCCCTGTTCATGGTGCTCAGCCCCCTCTGACCCTCAAGAACAGTATGGTCCAGGCCAACCAGACGTCCAAACCCAGTGCCGCCCATTCTACCAGCAGCACTAGCGCCCCGTCCTGTAACATCAACATCCATCAGACCCATTCCATCGTGACAACGTCAGAGCCTCAGTGCCCACCTGGCCACTCTGTGGCTGAGCTCAAACCCACTGTGTCCTCCACGCATTCACCCTTCAGGATGAAGCCGGTTGCAGGCCTGCAGGAACGACGTGGATCTAATGTGTCGCTGGTTCTGGACATGAGTGCTTTGGGTTCAGTGGAGCCTTTGAGTAGTGGGGTCGTGACCCCACGTGAGCGTGTAACTCAGGAATACCTGCAGTCAGCTGGTCGGGTCCTCTCACGGCAACAGCTTCGTGAcgtcacactgaacacacagaTGTTACATGCAGAGTTTGCCGAAATTCCAATGAACTTCGTGGATCAGAAAGAACTGGATATCCCAAATCATGGATCAAAAAATAGATACAAGACCATTTTGCCAAATCCACATTCCAGAGTTATTCTGAAGACTAAGAACTCAAACGACCTCTTCAGCAGTTACATTAATGCCAACTACATAAGAGGCTATCTTAGAGATGAGAGAGCATTCATTGCCACTCAGGGTCCAATGATCAACACGGTGAACGACTTCTGGCAAATGGCCTGGCAAGAGGACTGCCCTGTCATCGTCATGATTACAAAactgaaagagaaaaatgaaaaATGTGTTCTGTACTGGCCTGAGAAGAGGGGGATCTATGGAAGGGTGGAGGTCTTTGTTAATAATGTGAAGGAATGTGACCACTATATAATCCGCTCCCTAATACTAAagCAAGGAGGCCAGAGTCGTAAAGTGCAGCACTACTGGTATACTTCATGGCCGGACCATAAGACCCCAGAGAGCGCTGGACCCCTGCTGCAGTTAGTGAATGATGTTGAGGAGGACCGGAGAGGCTTTACATCCTGTGGACCGGTTATTGTGCATTGCAGTGCTGGAATTGGTCGGACGGGGTGTTTCATAGCCACAACAATCGGCTGTCGTCAGTTGGAGCTGGAGGGAGTTGTGGATGTGTTGGGAATTGTGTGCCAACTTCGGACAGACAGGGGCGGTATGATCCAAACGGAGGAACAATATGAATTTGTGCACCATGCCTTGAGTCTCTACGAAAGCCGCCTCCCTACAGAGCCTGGACAATAAACAGTTAGAGGAGCTTCAATTTTCGTACCAAGAGATCTGCTATTGCCATGCGTTTTCAGATTCAGGAGAGAAGGCAGTGGATAATGTTTGCGAAGATGGATCTTTGTGGAATTTTGTTATGTGAGTGTCAAGGCAAGGGTTGCACACATCATGACTCAATGTTTGCCGGAAGCCGTTATTGCCGGGAAATGCATTTCGTCATGACTTTTCAATAGCCTCTGCCATGCTTTTTAAGGCCACTAGTGTTAAAAGAACATgccacttttttgaaaataggctcaatCTCCAACTCCCCCGGAGTTAAAAAGTCGAGacttactgtttttgaatccactCGATTTCCGAATCTGGCGAAAGCACTTTCAACAGTgtttagcatagatcactgaatctgtTTAAACAAGATGCgtctggtctaatcagattcaatgatctatgctaagctatgctaaaagtgttatcgCCGGACCcggagattggctgaatggattaaaaaaactCAACTTTTCAAATGGAGCTGGAGAAATAGTATTCATTTAAGTGTCATTGTACAAGGTCTAGTTCCACTAAATAGCGCTTTTTTAACAGTACACACAGCTTAAAGCCTTTCATTTagctttctctttattttatctGAATATAGCCTTGAAAACACGAACTGGGCATTTTGAAAATTCTGAATTGTCTCCATGATGCAGTATAAATGAGGCGTTAAAATTCTGTGTATCATAGTATGATCATCGGATGTTTCGTTAGaacacatatttgttttttttcacttttgtacTTATTGGTTAATGATTTCTAGgcatattttagaattttgaaaatattcagactGTGTCTCCCGTGTTGCTGCTACTGAATCTACAGTACcgcaaattaaatgttttgtttgctcTGAGGTTCGCAAATTGAATGTTATGAGAGAGAAGGACTGGATGCCTCAGAATTTCTATTGCGTTGGAGTTGCTGAATGCACATAACGACAAACCAACAGCAAACCCAgaacaaatgacttttatgaGTGGATTCCAACTGATACATATGGAATTTATGATCATTTGAATTGTTCTAGAGACTCAATAAATCGGTCAATGGTTCGTGAATTACTAAACAGATCAGAGTATAAATATCCAACCTAAAGAAATACCATCACAACATATTTGGGAaagaaatatgtaattatttaaaataacaaaaattttaTAGAgtgtatagaaataaaataattccaaaatattaataataatacagttttagtGTGAAGGTTCATGTATTCTGGGACCACAAGGGTTTTGCTGCTAATACTCCAATTGTTTATGGCTTTAGGAATTAAATATGTTGTATGAAAGTGAATATTTctaatgcatttgttttctatcgtatttattattataaaatctattgttattattacatgATACTTTTATATACTATGGTTATTGTTAATGTGCACTGTTACGCTATATATTTTCCACTGTGTGGGCTCAATGTTAGGCAGTCAGTGACTTTCCTATTTATGCTTAATGATGAGTGATGTGAGTTGAAttctgtaaataataacaatctATCATATCCACAATAGTAATATTATCAACTGCACATACGGATGCCTCAGACAGTGAGGGTAGCAGCATAAGCAACCCAAACTGATGATCTGAGCTGTTTTTATATGATACTTTGGTTGTGGTAGAACCGATTAGTTATGTGTATTGGTACAGTACGTATATTAGAAATGCGTAACATGGTCccaataaaaactttaaaagttaTTGATTAATGCTATACAGTTCTTTGTATTTACATTGTGTGTATGGTCCTATAACAATGTTAAACCATCACCTAAAGCCATAATAtctcatgtttacatttttgccaCCGCAAGTTCATCCAATATGCTTATTCTGTTATTAACCTCTGTcgtgtgaaaatgtgtttttgtaaagtgTAACTTTGCCTAGTCGGAAAGCAAAGTACAGGAATTATGATTCTGACTTTATGGTCATTACTGCCAATAAATCAACATGAGTTGTCA
>XM_043237252.1
GATTCCCCAAACGGATCCTCTCGGCGCTTGGAGAGACGCGTCGGGGTGTGTGATCCTTAGCAGATGCAGATTTATTGTATTAAACAGCCATCGTTTCGGCTTCTTAACCACAGAGACGCCGCGGCCCCGACTGGTTTCCATAAAGCCACAATGCGTTTGTAGTGCAAGAAGAATCATGTTCGCGGCGTTAGTCCTCGTTTCTTCATTGATGGGGTTGCGCGTCACAGGGGGCGTCTTTGCGGACGATGAAGTTTATCGGATACCGCATCGGCGCTTGGCTAATGGATTGACTGGCTCTGCCTACCAACACATGGGTGTTCTCAGTCAGGAAAAGCCTTTGGGATTCAACGGGGAGCTGCTTCAGGTCCAGTCCCGTGGACGGGTGGCTAAGCTGTTTCTAGAATCCCATTTCCAGAGAACTCCGCAGAGGAAATCAGATGCCGGCTTCCTGCAAAGCGTCGACCAGGCGGAGAGCAAGCCTGCATCTGCCCACCATACGGTCGAAATGGTGCTTTACCGAATAAAGGAGAAGGAATTCTTGGATCATCAGCTAAAAGACCCGTCCCAGCCTATCCGGGACGTGCAGCTGGCACCCATCCCTGTTCATGGTGCTCAGCCCCCTCTGACCCTCAAGAACAGTATGGTCCAGGCCAACCAGACGTCCAAACCCAGTGCCGCCCATTCTACCAGCAGCACTAGCGCCCCGTCCTGTAACATCAACATCCATCAGACCCATTCCATCGTGACAACGTCAGAGCCTCAGTGCCCACCTGGCCACTCTGTGGCTGAGCTCAAACCCACTGTGTCCTCCACGCATTCACCCTTCAGGATGAAGCCGGTTGCAGGCCTGCAGGAACGACGTGGATCTAATGTGTCGCTGGTTCTGGACATGAGTGCTTTGGGTTCAGTGGAGCCTTTGAGTAGTGGGGTCGTGACCCCACGTGAGCGTGTAACTCAGGAATACCTGCAGTCAGCTGGTCGGGTCCTCTCACGGCAACAGCTTCGTGAcgtcacactgaacacacagaTGTTACATGCAGAGTTTGCCGAAATTCCAATGAACTTCGTGGATCAGAAAGAACTGGATATCCCAAATCATGGATCAAAAAATAGATACAAGACCATTTTGCCAAATCCACATTCCAGAGTTATTCTGAAGACTAAGAACTCAAACGACCTCTTCAGCAGTTACATTAATGCCAACTACATAAGAGGCTATCTTAGAGATGAGAGAGCATTCATTGCCACTCAGGGTCCAATGATCAACACGGTGAACGACTTCTGGCAAATGGCCTGGCAAGAGGACTGCCCTGTCATCGTCATGATTACAAAactgaaagagaaaaatgaaaaATGTGTTCTGTACTGGCCTGAGAAGAGGGGGATCTATGGAAGGGTGGAGGTCTTTGTTAATAATGTGAAGGAATGTGACCACTATATAATCCGCTCCCTAATACTAAagCAAGGAGGCCAGAGTCGTAAAGTGCAGCACTACTGGTATACTTCATGGCCGGACCATAAGACCCCAGAGAGCGCTGGACCCCTGCTGCAGTTAGTGAATGATGTTGAGGAGGACCGGAGAGGCTTTACATCCTGTGGACCGGTTATTGTGCATTGCAGTGCTGGAATTGGTCGGACGGGGTGTTTCATAGCCACAACAATCGGCTGTCGTCAGTTGGAGCTGGAGGGAGTTGTGGATGTGTTGGGAATTGTGTGCCAACTTCGGACAGACAGGGGCGGTATGATCCAAACGGAGGAACAATATGAATTTGTGCACCATGCCTTGAGTCTCTACGAAAGCCGCCTCCCTACAGAGCCTGGACAATAAACAGTTAGAGGAGCTTCAATTTTCGTACCAAGAGATCTGCTATTGCCATGCGTTTTCAGATTCAGGAGAGAAGGCAGTGGATAATGTTTGCGAAGATGGATCTTTGTGGAATTTTGTTATGTGAGTGTCAAGGCAAGGGTTGCACACATCATGACTCAATGTTTGCCGGAAGCCGTTATTGCCGGGAAATGCATTTCGTCATGACTTTTCAATAGCCTCTGCCATGCTTTTTAAGGCCACTAGTGTTAAAAGAACATgccacttttttgaaaataggctcaatCTCCAACTCCCCCGGAGTTAAAAAGTCGAGacttactgtttttgaatccactCGATTTCCGAATCTGGCGAAAGCACTTTCAACAGTgtttagcatagatcactgaatctgtTTAAACAAGATGCgtctggtctaatcagattcaatgatctatgctaagctatgctaaaagtgttatcgCCGGACCcggagattggctgaatggattaaaaaaactCAACTTTTCAAATGGAGCTGGAGAAATAGTATTCATTTAAGTGTCATTGTACAAGGTCTAGTTCCACTAAATAGCGCTTTTTTAACAGTACACACAGCTTAAAGCCTTTCATTTagctttctctttattttatctGAATATAGCCTTGAAAACACGAACTGGGCATTTTGAAAATTCTGAATTGTCTCCATGATGCAGTATAAATGAGGCGTTAAAATTCTGTGTATCATAGTATGATCATCGGATGTTTCGTTAGaacacatatttgttttttttcacttttgtacTTATTGGTTAATGATTTCTAGgcatattttagaattttgaaaatattcagactGTGTCTCCCGTGTTGCTGCTACTGAATCTACAGTACcgcaaattaaatgttttgtttgctcTGAGGTTCGCAAATTGAATGTTATGAGAGAGAAGGACTGGATGCCTCAGAATTTCTATTGCGTTGGAGTTGCTGAATGCACATAACGACAAACCAACAGCAAACCCAgaacaaatgacttttatgaGTGGATTCCAACTGATACATATGGAATTTATGATCATTTGAATTGTTCTAGAGACTCAATAAATCGGTCAATGGTTCGTGAATTACTAAACAGATCAGAGTATAAATATCCAACCTAAAGAAATACCATCACAACATATTTGGGAaagaaatatgtaattatttaaaataacaaaaattttaTAGAgtgtatagaaataaaataattccaaaatattaataataatacagttttagtGTGAAGGTTCATGTATTCTGGGACCACAAGGGTTTTGCTGCTAATACTCCAATTGTTTATGGCTTTAGGAATTAAATATGTTGTATGAAAGTGAATATTTctaatgcatttgttttctatcgtatttattattataaaatctattgttattattacatgATACTTTTATATACTATGGTTATTGTTAATGTGCACTGTTACGCTATATATTTTCCACTGTGTGGGCTCAATGTTAGGCAGTCAGTGACTTTCCTATTTATGCTTAATGATGAGTGATGTGAGTTGAAttctgtaaataataacaatctATCATATCCACAATAGTAATATTATCAACTGCACATACGGATGCCTCAGACAGTGAGGGTAGCAGCATAAGCAACCCAAACTGATGATCTGAGCTGTTTTTATATGATACTTTGGTTGTGGTAGAACCGATTAGTTATGTGTATTGGTACAGTACGTATATTAGAAATGCGTAACATGGTCccaataaaaactttaaaagttaTTGATTAATGCTATACAGTTCTTTGTATTTACATTGTGTGTATGGTCCTATAACAATGTTAAACCATCACCTAAAGCCATAATAtctcatgtttacatttttgccaCCGCAAGTTCATCCAATATGCTTATTCTGTTATTAACCTCTGTcgtgtgaaaatgtgtttttgtaaagtgTAACTTTGCCTAGTCGGAAAGCAAAGTACAGGAATTATGATTCTGACTTTATGGTCATTACTGCCAATAAATCAACATGAGTTGTCA

Function

symbol description
ptprr Predicted to enable protein tyrosine phosphatase activity. Predicted to act upstream of or within protein dephosphorylation. Orthologous to human PTPRR (protein tyrosine phosphatase receptor type R).

NR:

description
PREDICTED: tyrosine-protein phosphatase non-receptor type 5-like

GO: NA

KEGG:

id description
K04458 PTPRR; receptor-type tyrosine-protein phosphatase R

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237251.1 True 4121 mRNA 0.43 13 18526006 18544653
XM_043237252.1 False 3866 mRNA 0.42 11 18526006 18544653

Neighbor

gene id symbol gene type direction distance location
LOC122342232 LOC107685875,LOC107749047,LOC107728228,LOC107671223 coding downstream 49247 18445452 ~ 18476759 (-)
LOC122343150 LOC107570416,LOC107749047 coding downstream 94572 18375327 ~ 18431434 (-)
wbp1 LOC107670394,LOC107728527,LOC106563291 coding downstream 307478 18213547 ~ 18218528 (-)
mtfp1 mtfp1,LOC107565646,LOC107566856 coding downstream 323875 18199050 ~ 18202131 (-)
LOC122343062 NA coding downstream 329485 18193309 ~ 18196521 (-)
LOC122343050 LOC107685395,LOC107754219,LOC107554754 coding upstream 23510 18568163 ~ 18571675 (-)
LOC122342233 LOC107685397,LOC107554760 coding upstream 27052 18571705 ~ 18579003 (-)
LOC122343042 NA coding upstream 34998 18579651 ~ 18583442 (-)
LOC122343043 LOC107724037,LOC107685393,LOC107554738 coding upstream 43010 18587663 ~ 18591387 (-)
LOC122342949 NA coding upstream 49666 18594319 ~ 18604310 (-)
G29662 NA non-coding downstream 60169 18435645 ~ 18465837 (-)
G29663 NA non-coding downstream 64693 18436567 ~ 18461313 (-)
G29656 NA non-coding downstream 116111 18380990 ~ 18409895 (-)
G29487 NA non-coding downstream 540188 17985013 ~ 17985818 (-)
G29457 NA non-coding downstream 585217 17873152 ~ 17940789 (-)
G29680 LOC107747644,LOC107709964,LOC107690747,LOC107687572,LOC107562152 non-coding upstream 11847 18556500 ~ 18559281 (-)
G29682 trim24,LOC107562152,LOC107690747,LOC107747644 non-coding upstream 18501 18563154 ~ 18564445 (-)
G29720 NA non-coding upstream 167095 18711748 ~ 18712103 (-)
LOC122343197 NA non-coding upstream 193162 18737815 ~ 18740781 (-)
G29726 NA non-coding upstream 199948 18744601 ~ 18747308 (-)
G29653 LOC107663329,LOC107575399,LOC107749046,LOC107758217,LOC107576964,LOC107665206,LOC107571858,LOC107671223,LOC107576424 other downstream 97663 18408560 ~ 18428343 (-)
G29473 NA other downstream 546084 17970605 ~ 17979922 (-)
LOC122342228 scgn,LOC107693759,LOC107757885,LOC107669120,LOC107714763,LOC107747999,LOC107663245 other downstream 781463 17734606 ~ 17744543 (-)
G29417 NA other downstream 789732 17735350 ~ 17736274 (-)
srd5a3 srd5a3,LOC107755245,LOC107683999,LOC107665336,LOC107601910 other downstream 887264 17637023 ~ 17638742 (-)
LOC122343054 NA other upstream 110591 18655244 ~ 18661653 (-)
LOC122342944 LOC107581743 other upstream 148349 18693002 ~ 18735640 (-)
LOC122343082 NA other upstream 354154 18898807 ~ 18902552 (-)
LOC122343130 NA other upstream 371673 18916326 ~ 18917533 (-)
G29787 NA other upstream 386883 18931536 ~ 18931875 (-)

Expression


Co-expression Network