LOC122342998


Basic Information

Item Value
gene id LOC122342998
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24558132 ~ 24564000 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237262.1
GTAGGAAGTGAGCTTCATATAAACAGGAGCAGGAACCCAGCGATTGTACTTCCTCCACTCAGGCACCATGTGGATTTACAAGGTGACCGTGTATAGCATGAGACAGATCATGGCCAAGGCAACGAACAGTATTTACCTGACGCTAATGGACTCGGAGCAGAAGAGCAGCGGAAAAGTCCTGGTCAACCCatccttcttttcttcttttgcaaCGGAGCTCACCCTCGAGATCCACGTGGAGAAGGAACTTACAGACAGCGTCCAGGTGAAACTTGAAAAGAAGagccattattttaattattcctgGTTCTGTAAGCATATCAGTGTGAGAAGTCCTTTTGGAGAAAGCTTGGAGTTCCCCTTTTATAGCTGGTTGGAAGACAAAAAGGAAGTGACCATCCAAAAAGGCACCGCTCGACTGCCTCAGGATGacacaaacataaaagaaagaCAAGAAGAACTGAAACATAGACGGGAAGTATTCAGATGGAAGGAACAAAACCAAGCCTTCCCTAAATGTATAGATGACACAGAGGGGGGGCTTCCTAAAGACGTTCAGTTTGATGGACAAAAAGGATTTGACTTTCAAAAGAACTTCCTAGAAGCGTCTCTGGAATTAGGTCTTGACAAAATTGAAGGATTAGTAGAGTCCTGGAAAGACATTACTGATTTTGAAAAGATATTTGAGCATTACAATATCAAGAACACTCCACTAGAGAACGTGATACAAGACTGGACCAAGGATTACATGTTCGGCTACCAGTTCTTGAACGGCTGCAATCCTGTCATGATCAAGAAGTGCACGGATCTTCCAGAGAAATTCCCCGTCACACACGAGATGGTCAAGGGCTCTCTGAAGGGACGCCAACTACATGAGGAGCTACGGAAAGGAAACATCTACATAGTGGATTATGAAATACTGAAGGACGTCCCAGCAGCCAGCCAGCGCTATCTGGCCGCACCAATCTGTCTACTGTACAAGAACGAAGTGGACCAAATGTTGCCAATCGCCATTCAGCTGAGTCAAACCTCAGGAGAAATGAGTCCAATCTTTCTTCCGAGTGATTCTAAATATGACTGGATGCTTGCCAAGATGTTTGTGAAATCCTCAGACTTCATCGTACACCAGCTGGTCACACACCTTCTCAAGACACATCTGGTGTCTGAGGTTTTTGAAATTGCCATGTACAGACAGCTGTCTGCCGTCCATCCCGTATACAAGTTACTGATGCCTCATGTTCGTTTCACGATCGCAATCAACGCAGAGGCCCGTAAACACCTTATCAGTGAAGATGGGGTCTTCAGCAAGATTAGTAGCATCAATGCAGATGGGATGGAGAAACTGGTGCAAAATGCCATGGAGGCTTTATCCTTCAAGTCCCTGAACATCCATGAGGACATAAAGGCTCGAGGAATGGAAGATACACCCAACTACTATTACAGAGACGATGGCTTGAAGATCTGGGAGGCAATCCACCATTTTGTTTCGGCCGTGGTCAAGATCTACTATGATAGCGATGAAGCAGTTCGAGAAGACGTGGAGATTCAAAGATTTGTTAAGGACGTTTCCTGCTTTGGCATGAATAACTCTCACAAGTTTCCAGAGTCTCTGGAATCTCGAGAGGAGTTGATCGAGTACCTGACCGTGGTGATTTTCACAGCTTCAGCACAACATGCCGCTGTCAACTTCGGACAGTTTGACTGGTACGGCTGGATCCCCAACAGTCCTTCCACCATGCGCAGACCACCTCCTCAACGGAAGGGGGAAGTGGATATGAAGCGTATCCTGGAGACTCTGCCGGACCGGGATTGTTCCAGCTTGGTTTTGGGTACAGTCTGGGCTCTCACTCGGATGGAGAAGAATGAGCTGTTCTTAGGCATGTATCCAGACACATTCTTCACAGAGCAACCTGTGAAGAAGGCCATAAAGACTTTCCGCAAGAGCCTCAGTGAGTTGACGGAGACAATCAAGAACCGGAATGAAAAATTAACTTTGGATTATTCTTATTTGTCCCCAGACAGAGTCCCCAACAGTGTTGCAATTTGATTGTCAAGAAGAGACGCTTCATTTGGCTATGCTTTCAAAGAGCACACACAGGTTTATGTTATGATCGGTTTATTGTTGAGTTCTAATTTCTAAAAAGTGTGTATTCATGCATCCCTGCTAtgatgttcatttattcatcttttggTTAATGTACTCAGGTTGCGGTGTACTGTaggttgttgggttttttttttactttattgatGTCTATCATTGTTCAGGCTTAATTTCTTTGGGTATGGGCTTAGCTGAAAAACGTTTAATGAATGCTTTAAAGGAATTGTTTTGCGATTGGGAACATCTCTGACTTCTGATGGTTTTGCAtttatgtttctatttttaactcTCATAAGAAAAAtagataaatgtttttcattacatcttttttttaatttcccttTCTAGTACTTTCTTGTAATTAATTAAGTATTTTCCAGATCTAAATGTAACGGTGTGTTTTCAGTGAATTCATTAATGTTCAGCTGTGCCTGCCGTGTTTGAAAATGCTagaagttgattttttttgtgataaataaaatattttaaatcaaatgaa

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0051213 dioxygenase activity molecular_function

KEGG:

id description
K15718 LOX1_5; linoleate 9S-lipoxygenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237262.1 True 2603 mRNA 0.43 14 24558132 24564000

Neighbor

gene id symbol gene type direction distance location
LOC122342346 LOC107581033 coding downstream 13962 24542138 ~ 24544170 (-)
LOC122343108 LOC107677819,LOC107725800 coding downstream 65633 24485362 ~ 24492499 (-)
ckap4 NA coding downstream 78218 24476996 ~ 24479914 (-)
LOC122342338 NA coding downstream 239020 24312842 ~ 24319112 (-)
LOC122343156 LOC107674852,LOC105007321,LOC107551422,LOC103361099,LOC107732279,LOC107677819,LOC107725800 coding downstream 291525 24265349 ~ 24266607 (-)
LOC122342983 NA coding upstream 18967 24582967 ~ 24593953 (-)
LOC122343065 NA coding upstream 63064 24627064 ~ 24631306 (-)
LOC122342349 NA coding upstream 399974 24963974 ~ 24981623 (-)
LOC122342351 NA coding upstream 468134 25032134 ~ 25034674 (-)
LOC122343864 NA coding upstream 787989 25351989 ~ 25352153 (-)
G31161 NA non-coding downstream 5277 24513956 ~ 24552855 (-)
G31115 NA non-coding downstream 17793 24298780 ~ 24540339 (-)
G31155 NA non-coding downstream 91576 24465363 ~ 24466556 (-)
G31124 NA non-coding downstream 93238 24453461 ~ 24464894 (-)
G31121 NA non-coding downstream 99873 24457414 ~ 24458259 (-)
G31179 NA non-coding upstream 72261 24636261 ~ 24639737 (-)
G31189 NA non-coding upstream 103638 24667638 ~ 24669294 (-)
G31192 NA non-coding upstream 123528 24687528 ~ 24688132 (-)
G31194 NA non-coding upstream 133907 24697907 ~ 24710380 (-)
G31199 NA non-coding upstream 146784 24710784 ~ 24711425 (-)
G31134 NA other downstream 60536 24304096 ~ 24497596 (-)
G31120 NA other downstream 62954 24306501 ~ 24495178 (-)
LOC122342340 NA other downstream 230869 24323970 ~ 24327263 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other downstream 447459 24110224 ~ 24110673 (-)
G31050 NA other downstream 786364 23745486 ~ 23771768 (-)
LOC122342407 LOC101068103,LOC105418166,LOC106522608,LOC108412963,LOC105419408,LOC108431938,LOC107395447,LOC106674638 other upstream 190056 24754056 ~ 24760786 (-)
G31314 NA other upstream 995040 25559040 ~ 25561198 (-)
G31394 NA other upstream 1609699 26173699 ~ 26175249 (-)
G31400 LOC102197881 other upstream 1760479 26324479 ~ 26325236 (-)
G31463 LOC107665166,LOC107752513,LOC107549841 other upstream 2802412 27366412 ~ 27367649 (-)

Expression


Co-expression Network