LOC122343000 (LOC107554745,LOC107700104,LOC107746770)


Basic Information

Item Value
gene id LOC122343000
gene name LOC107554745,LOC107700104,LOC107746770
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18627425 ~ 18632437 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237264.1
gtttAACGCATGCAAGGTTTTCAAAATGACACAAACAGTCCTGTACGTTTTACATGTCATAGAAagaatcattatttttacttaatctTTTTGAACCGTATCGTTTGTGATTAAAACGCATCCTCATACAAAAGATGCGTCTCTTTTTGCTCCCTGTATCACGAGTcggtttattttaaaacaaattcgGCCAATGGCAAGTAGCAACGAAATAAACGTTTTCTTATATTTAACTACTGCCCGTGTTTATGCAGAAAGAATCCAAGGAcgcatatttattaatttcgaAAATATGAGACTCTGCATGCAAACGCAAGTCATTTAACTTACGTTAGATTTATATATTCGTAGCAAGATAACGTGCCATACGAGATTATTCCCGTTTTCTTAATTGTTTTTCTCCCCATGTGCTTCATTGTAGCAGACCACGTTATCATTTATGaagtataatataatagcaCCGCCCCATAGAAGCTAATAAAGGCAACCTttcttgtattttcttttttgattgtCTGCAATATCGTGGCAAATAATATGAAGAGGAGAAACCACAGTAACACCCCAAATCATGCAGTGATAaagtttttaatgcactttttatttttcagacgTTGGTGGATGTGTAATAAGAACgttattgtttcatttaaaatgaatgattttgaaCCAGATGAACTTAACAATAACTTTGGAGCTTGAAACGGTCAGTTCAGCGAATTGCTCTGAAAAAAAAGCCGACTGCAGAACCAGGGAGCTGATTGAGAGGCATGCAAagatttggtttggttttatttttcttcccgTTAAGCTTTGTGtctaaacacacagaaaaactaTTAAGATGGCGGTTATTAAAGAGGAAAGTGAAGACATGAGGATCGAAGCGGACTTCAGAGTGAAACAAGAAGACGCCGAGGATCAAGCAGATCTGATCAtactgaaagaagaaagccaagAACTGCCTGAAACGGAAGAGAAAGATAAGTGCGAGAAGCTTCACGATTTCACAATCGGAGAGAAATCCCATCCCACCGGAAAAAAGCCCTCTCGGAAGAGGGCTCAAAAGGCGGATTCCAACAGCTATTTCACCTGCTGtcagtgcggaaagagcttcAATCAAAAGCAAAACCTCGAAGTCCACATGAGagtccacactggagagaagccctTCAGCTGCCAGCAGTGCGGAAAGTGCTTCACTCAGAAAGGAAACCTCAAAAGTCACCTgaggattcacaccggagagaagccttacaccTGCAAGctgtgcgggaagagcttcacgGCAGAACCGAACCTCAAGTACCACATGAACATTCACAATGGAGTGAAGCCGTTCACTTGcgatcagtgtggaaagagcttcacTCGTAAAGTAACCCTCAATTACCACACCAGGAGTCACACGGGGGAAAACGGTTTAATTTGCCACCACtgcggaaagagtttcagtCACAAAGTGAGCCTCAAGACTCACATGAGgcttcacaccggagagaagccctacACCTGCCCTCAGTGCGGGATGAGCTTCACGTACAAAGCATCCCTCGATTCTCACATGGGAAGCCACGCTGGGGGGAATCCTTACTCCTGCAAAgtgtgcgggaagagcttctcGCTGAAAGGAAATCTCAAGACTCACACGagaatccacaccggagagaagccgttcgTGTGCGTTCAGTGCGGAAGGTGCTTCACGCGTAAAGTAACCCTCAATTACCACATGAAGATTCACTCGAGGGAGGACTGCTTCATATGCCATGAATGTGGAAAGAGCTTCCCAGACATGAAACACCTGAACAGGCATGTGGTAATTCActccggagagaagcctttcaaATGCCAGCAGTGCGGAAAGGGATTCCAGTTCAATAAAAACCTCAAGACTCACGCGAAAATTCACACGAGAGAAAAAACGTTCAAATGCcatcagtgcgggaagagcttcagcTACAAAGTGAGCCTCAAGACTCACATGAGacttcacaccggagagaagccctacGCCTGCCCTCAGTGCGGGAAGACCTTCGCGTATACAGCGACGCTCAACGCGCACATGAGGAGCCACACCGGAGAGAGGCCGTACGCGTGCGgtcagtgtgggaagagtttcacgCGCAAAGGAAACCTCAATTACCACACGAGGATCCACTCTAGGGAGAACAGTTTTAAGTGTCTTCAGTGCGGAACGAGTTTCGCTGACGGGAACCACCTCAAGAGTCACGTGACGACTCACGTCGGGGAGAAGCCTTTCATGTGCCGTCACTGCGGAAAGAGTTGCGCCAACAAAACAAATCTCGAGGTTCACGTAAGggtccacaccggagagaggcCTTTCACCTGCCCGCAGTGCGGGAAAGGTTTTACACTCAAAGGGAATCTTAAGACGCACATAAgagtccacaccggagagaggcCGTTCACGTGTCTTCAGTGCGACAAGACCTTTACGTATCAAAGAGATCTGAAACATCATCTGCGAACGCATTCTGAGAAGAAGCTCCAGTGCTTCGAGTGCGGAAAGGGATTTCGGAAAACCGGCAACTTCAGAAAGCACCTGCGCATTCACTCGGGAGGGAGGCGatgtaataaaaaattcatttcGCCGGCGCACTTACAGATACACTTGAAGAGGCGCTATTTGTGCTCCTCGTGTGGAAAGAGGTTTAAATGGCTCAGCGGTTTAAAATGGCACCAGAAAATACGGATCTGTGTGAAATTGAAAATTTCGCCTCCGCTAAACGCGGGCCAAATCTGATTCTCCAGCTTCATGACCGCTTGCCTCCGTGTACTTTTGTCTTGAGGTTTCTTCGTTCTTTTTGTCGTGTACTCACGGGCTTTCACTTCACTTATGTAAAATATTGAGTGCTTATGTAGAGGCATCGCTCCATTCCACGTGTTTATATCTCAGAATCGTAATATTAGTTGAACTTCTGTCTTGCTGTGAATTACTGCATTATTCAGCGTAAGGAAGACtgtaaataaaagaacaaaaactgtATGAAAACCGATAAATATCTGGACTTTGACATGGATGTTGGGCATCATCTGGTGACAAAACTGTAAAAGcacttctgtatttttagcTTATACAATGGACGATGTTAACACAGCGTTACAAAAAAACGCTGGCTAAAGGTTAAAGCAGTACTTCCCTATACATATAGTATATGTATGCTAATGTATAGTATCAGCCTAGTATATTCCATCTGGTAGCGAACACAGGTGTACTAGAAAGTTTAATCTCTGTCCAGTGTCTGCGCCGTTTCTCTCCACAAGGTATAAAAATGTCTTGttaaaa
>XM_043237265.1
ACAGAGAGACGCCATCATACTCACAGAATTCAACAACTACACCCCGAAAAAAGAGTTGACCCGAAGCCCCAAGGTGCTGGAGCATCAGGTCCCTGTGATAGCACATTTGCTCTCGAGACTGGGCCAGTCGTTTATGTCCTGATGCCCACTTCCCGTAATGGCCCATGGCGCCCTCCACGATCTTTGTGAAGATGCAGGGGGACAGGGACAGCCTGAAGGGCAGTACTTTGTACTGCTGAGCTTGACCCTTGAATACAAATTAAAGAAATGGTCTGCGTCAAGGAAAAATTGAGACATGGAAGCACACATCCTTTAAGTCAACCGCTGCAAACCTGTGGCTGAACACATTTGGTAATGCATTTCTGCATCTGCATTTTGAACTGGAGCTTGCAAATGGCCCGATTCATAACACGCAGGTCCAGGATTGTCCAAAGGCCACCTCCTTTTTTTGGCATGATGACCTCGTCTCGGCTGGAGGGACCGGCTCGATTGTATCCTTTGCCAGGAGGACAGTGAGCGCCTTGGACCGCAACTGAAGTCTGGAGAACAGTGCAGGGGGAGTGTTCGCTTGAGAACCATACCAGACCGTTTCTGGCCCAAAAGACTTGCGCACAAATGACATATTTTCAAGACGTGCAGCAAATTCAAAACCAACAAATGTGTATCAGTTAATATTAATCGATTTCTGCAATGAAACGTCACAGCTTCGTCGCACGCTTTTGCTGGtagttttgaatattttcagaaacatctattttacttaatatattttgaatatactTTTCTGttcactttgttttgttttttttgaacagAACCTCTATTTTTGGACCGGCGGCGTGACGTCATAAGGCTGCGCCGCGGTCCCGCGTCAGTTGTCATTCTgctaaaaaaaagaaaaactaTTAAGATGGCGGTTATTAAAGAGGAAAGTGAAGACATGAGGATCGAAGCGGACTTCAGAGTGAAACAAGAAGACGCCGAGGATCAAGCAGATCTGATCAtactgaaagaagaaagccaagAACTGCCTGAAACGGAAGAGAAAGATAAGTGCGAGAAGCTTCACGATTTCACAATCGGAGAGAAATCCCATCCCACCGGAAAAAAGCCCTCTCGGAAGAGGGCTCAAAAGGCGGATTCCAACAGCTATTTCACCTGCTGtcagtgcggaaagagcttcAATCAAAAGCAAAACCTCGAAGTCCACATGAGagtccacactggagagaagccctTCAGCTGCCAGCAGTGCGGAAAGTGCTTCACTCAGAAAGGAAACCTCAAAAGTCACCTgaggattcacaccggagagaagccttacaccTGCAAGctgtgcgggaagagcttcacgGCAGAACCGAACCTCAAGTACCACATGAACATTCACAATGGAGTGAAGCCGTTCACTTGcgatcagtgtggaaagagcttcacTCGTAAAGTAACCCTCAATTACCACACCAGGAGTCACACGGGGGAAAACGGTTTAATTTGCCACCACtgcggaaagagtttcagtCACAAAGTGAGCCTCAAGACTCACATGAGgcttcacaccggagagaagccctacACCTGCCCTCAGTGCGGGATGAGCTTCACGTACAAAGCATCCCTCGATTCTCACATGGGAAGCCACGCTGGGGGGAATCCTTACTCCTGCAAAgtgtgcgggaagagcttctcGCTGAAAGGAAATCTCAAGACTCACACGagaatccacaccggagagaagccgttcgTGTGCGTTCAGTGCGGAAGGTGCTTCACGCGTAAAGTAACCCTCAATTACCACATGAAGATTCACTCGAGGGAGGACTGCTTCATATGCCATGAATGTGGAAAGAGCTTCCCAGACATGAAACACCTGAACAGGCATGTGGTAATTCActccggagagaagcctttcaaATGCCAGCAGTGCGGAAAGGGATTCCAGTTCAATAAAAACCTCAAGACTCACGCGAAAATTCACACGAGAGAAAAAACGTTCAAATGCcatcagtgcgggaagagcttcagcTACAAAGTGAGCCTCAAGACTCACATGAGacttcacaccggagagaagccctacGCCTGCCCTCAGTGCGGGAAGACCTTCGCGTATACAGCGACGCTCAACGCGCACATGAGGAGCCACACCGGAGAGAGGCCGTACGCGTGCGgtcagtgtgggaagagtttcacgCGCAAAGGAAACCTCAATTACCACACGAGGATCCACTCTAGGGAGAACAGTTTTAAGTGTCTTCAGTGCGGAACGAGTTTCGCTGACGGGAACCACCTCAAGAGTCACGTGACGACTCACGTCGGGGAGAAGCCTTTCATGTGCCGTCACTGCGGAAAGAGTTGCGCCAACAAAACAAATCTCGAGGTTCACGTAAGggtccacaccggagagaggcCTTTCACCTGCCCGCAGTGCGGGAAAGGTTTTACACTCAAAGGGAATCTTAAGACGCACATAAgagtccacaccggagagaggcCGTTCACGTGTCTTCAGTGCGACAAGACCTTTACGTATCAAAGAGATCTGAAACATCATCTGCGAACGCATTCTGAGAAGAAGCTCCAGTGCTTCGAGTGCGGAAAGGGATTTCGGAAAACCGGCAACTTCAGAAAGCACCTGCGCATTCACTCGGGAGGGAGGCGatgtaataaaaaattcatttcGCCGGCGCACTTACAGATACACTTGAAGAGGCGCTATTTGTGCTCCTCGTGTGGAAAGAGGTTTAAATGGCTCAGCGGTTTAAAATGGCACCAGAAAATACGGATCTGTGTGAAATTGAAAATTTCGCCTCCGCTAAACGCGGGCCAAATCTGATTCTCCAGCTTCATGACCGCTTGCCTCCGTGTACTTTTGTCTTGAGGTTTCTTCGTTCTTTTTGTCGTGTACTCACGGGCTTTCACTTCACTTATGTAAAATATTGAGTGCTTATGTAGAGGCATCGCTCCATTCCACGTGTTTATATCTCAGAATCGTAATATTAGTTGAACTTCTGTCTTGCTGTGAATTACTGCATTATTCAGCGTAAGGAAGACtgtaaataaaagaacaaaaactgtATGAAAACCGATAAATATCTGGACTTTGACATGGATGTTGGGCATCATCTGGTGACAAAACTGTAAAAGcacttctgtatttttagcTTATACAATGGACGATGTTAACACAGCGTTACAAAAAAACGCTGGCTAAAGGTTAAAGCAGTACTTCCCTATACATATAGTATATGTATGCTAATGTATAGTATCAGCCTAGTATATTCCATCTGGTAGCGAACACAGGTGTACTAGAAAGTTTAATCTCTGTCCAGTGTCTGCGCCGTTTCTCTCCACAAGGTATAAAAATGTCTTGttaaaa

Function

NR:

description
PREDICTED: gastrula zinc finger protein XlCGF26.1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237264.1 False 3313 mRNA 0.44 2 18628328 18632437
XM_043237265.1 True 3379 mRNA 0.47 3 18627425 18632437

Neighbor

gene id symbol gene type direction distance location
LOC122343002 NA coding upstream 154 18619551 ~ 18627271 (+)
trim24 trim24,LOC107709964,LOC107687572,LOC107747644,LOC107562152,LOC107690747 coding upstream 62059 18556569 ~ 18565366 (+)
rab21 rab21,zgc:154045,LOC107687573,LOC107690748,LOC106609839 coding upstream 73036 18547531 ~ 18554389 (+)
LOC122343129 LOC107565648,LOC107660365,LOC106563294,LOC108274068,LOC107733731 coding upstream 405105 18218716 ~ 18222320 (+)
lman2la lman2l,lman2la,LOC107660366,LOC107565653,LOC102299173 coding upstream 416532 18202735 ~ 18210893 (+)
si:ch211-166e11.5 LOC107685387,LOC107554747,LOC107712904 coding downstream 1672 18634109 ~ 18646928 (+)
LOC122342234 LOC107685386,LOC107554769,LOC107712902 coding downstream 14361 18646798 ~ 18655105 (+)
LOC122342235 LOC107685875,LOC107749047 coding downstream 126117 18758554 ~ 18782810 (+)
LOC122343102 LOC107747636,LOC107554732 coding downstream 173013 18805450 ~ 18809963 (+)
LOC122343011 NA coding downstream 178423 18810860 ~ 18814594 (+)
G29591 NA non-coding upstream 24109 18600428 ~ 18603316 (+)
LOC122343196 NA non-coding upstream 33309 18591447 ~ 18594116 (+)
G29548 NA non-coding upstream 161588 18441631 ~ 18465837 (+)
G29544 NA non-coding upstream 166830 18435643 ~ 18460595 (+)
G29484 tbx3a,LOC107742157,LOC107597930,LOC107687999,LOC107728866 non-coding upstream 566509 18059335 ~ 18060916 (+)
G29600 NA non-coding downstream 30423 18662860 ~ 18665083 (+)
G29627 NA non-coding downstream 152608 18785045 ~ 18785246 (+)
G29633 NA non-coding downstream 182446 18814883 ~ 18815278 (+)
LOC122343164 NA non-coding downstream 270798 18903235 ~ 18907824 (+)
G29777 NA non-coding downstream 299882 18932319 ~ 18932690 (+)
G29545 NA other upstream 166108 18436460 ~ 18461317 (+)
G29526 NA other upstream 326236 18300415 ~ 18301189 (+)
atp5mj NA other upstream 1586595 17038419 ~ 17040830 (+)
G28982 NA other upstream 2153044 16473898 ~ 16474381 (+)
G28899 NA other upstream 2641699 15985219 ~ 15985726 (+)
G29642 NA other downstream 250742 18883179 ~ 18886402 (+)
G29814 LOC107660256 other downstream 657783 19290220 ~ 19342911 (+)
G29835 NA other downstream 1098825 19731262 ~ 19786128 (+)
LOC122343071 NA other downstream 1113297 19745734 ~ 19750074 (+)
LOC122343063 NA other downstream 1405496 20037933 ~ 20043453 (+)

Expression


Co-expression Network