ckap2l


Basic Information

Item Value
gene id ckap2l
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 17840064 ~ 17851149 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237272.1
AATTCAAGCGTCAGTTAGCCGCTGTGTATGCTAACCGCTAATAGACTCGTACACGAagatataaacaaacactgtgTTTATTCCGATTTAATATTTGATGAGAGTGATCGGATAAAGAGATGGAAGCTGTGACGGATGAAGACGCGTCTAAACTGTCTAAGATAGAGCTTCGCAAACAGAAATTGTCAGAATACCTCGCCGCGAAAGGACGACTGAAAGCTCCCAATCCAAAGCCGTATCTCAAGGAGAAGCCTGTTGCCAAGAAGCAAGCTGAAAATAACCAGAAGTCCAAAACTaCGGCCGAAGGAAAAGAGAACCGTGGCATCAATGGCACAAATATAAAAGAAGTGAAGAGAGCGAAGGCTCCGGACGTTGGCACGTCCTCAAAGAAAGTGTCTGGCATCAGTTCGCTAGCCAAAGCCCAAACGCAGCCATCGAGTCGTTCCCGTAACCCTCATCAGGAAGACTCTCGTGTTTTGAGCACGAAGAGCAATAAAACCGCTTCAATTCCAACGAAAGCCCACAATGCTGAGAAAACTCGTTCTCAAAGAGTCCTTCCCAAAGCTGAGCACCCCGCTCAAACATCCAGAACCGCCGTCAGTAACCCTTCACGGTCTGGACCGGGCCGCACCGAGACGCACGTCCAGTCGGCGAGGCCTTTGAGTAAAAAACCAACacaaacgggcgtcaaatcagCCTCCGGTCTGACGGGGCGAAGGCCAGCGATGGCAACCGAGACAAAACTGCAGAGAAATGATCCTAAAGCCCACGAGAAACCCACGCGGCTGCCCAGAAGTTCTCAAAGCGACCCGAAACCAAACCCATCGGACAGATCCCGTGAGACTCTCTTTGTCGATGCCGCTAAATCTAAATCGATCTCCAGGGCCTCCACGGCTCTCTCTAAACCTCCCCAGATCCCCGGAAATAAAGAACCTGCTGCTGTTAAACGATCCAGGAGCTGTGTTCTCCCGCGGAAGACCGCTGCTCCTCCAGAGCTTCAGAAGACCTCCATCCAGACCAAGCCTGCGCTTCAGCTGCAGACGCCCAGATCCAGGCTCTGTCCCGGCGCTCAAGGGGTCCGGACGGCCCCGGTGGACGGGGCCAAGAAGCCCAGTGCCGCTCAGGAGGAGAGACTGCGGAAGCTCCAGGAGTGGCGGGAGTCGAGGGGCATCACGTATAAGCGTCCTCCGATGCCTGTCCGGCTCCTCAGGAGGAAGACGGTGTCTGCTCTTCCTCAGCCGTACTGGACGTCTATGGAGAGTGAAGATGAGGTTCACGACGTTGTCTTTGCTGTGGACCGATCGCTTGACGACTGCATTCAGTTATTACAGCAGGGTTTCCCGGCGGAGCGGGTCAGAGATGTTTTGTCTCGGCTGCCGATGGCACAGAAGTTCACCAAGTACTGGATCTGTCAGGCCAGGCTCATGGAGAGAGAGGGGAACCTGGAGGTGCTGCCCATGTTTCAGGAGGCCATCCGTGTGGTGAGAGAGCCAGTGGACGAGCTGCGATCCGTGGTTTTTGAGATCCTTAAAAAGGCACAGATTCAAGGTTCGTCTCTGACGCCTGAAGAGCCTGGAGCGTGtgatgaagaggaggatgatgatgaagggGTCGTGTGTACCCCAAAACCCATCAGTGCCCTGATCTCAGGAGCGAGGGGAGACTCGTCTGTCGTCAAGTACAAGATCACAGACACCCCGGGagGGAAGAGGAGTCAGCGAGGATCCGGACGAGTGGACGGTCATCAGCTCCGGTTCTTCACCCCGGTGCGCCGCTCGGTTCGGATCCAGACCAGCGCTCGCCGTTATCCCTCGGCTCTTCAGGAACACGAGCCCTGCGTCAGCTCCGTCTGTGAGCTGGAGcgtgaggtcaaaggtcagagctCACCCGTGTACGCGTGTACCGCGAGAACGAAGCGCTGACGGACCGCGTTCACGTCACGCTGGTTTATCCAGACGAGGAGGAAACGTGATGATGTTCATCACCCTGTCAGTAGATTTCAGGTCCAGCTGGTCAGATATGGGCTGACCGGTTCATATTTTCATCTCCGGTGTGTACAGATAACATGATGCTTGTGTGTCGCCAAAAACCTCTACATGATCTTCATAACTTCAGCTATAGCTCATGGAGTAGACTATATATAATGTTGCTGTAATTTGTTCTAATTAAACACTCTTTTTAGGAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K16769 CKAP2; cytoskeleton-associated protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237272.1 True 2185 mRNA 0.54 9 17840064 17851149

Neighbor

gene id symbol gene type direction distance location
LOC122343038 LOC107698808,LOC107743352 coding downstream 108667 17728522 ~ 17731397 (-)
LOC122342227 NA coding downstream 113268 17720148 ~ 17726796 (-)
LOC122343057 NA coding downstream 120274 17717764 ~ 17719790 (-)
LOC122343083 NA coding downstream 123013 17713746 ~ 17717051 (-)
LOC122343120 LOC107746441,LOC107599206,LOC107661202 coding downstream 126541 17711195 ~ 17713523 (-)
LOC122342984 LOC100150651,LOC107755845,LOC107668749,LOC107599606 coding upstream 3552 17854701 ~ 17880796 (-)
dqx1 dqx1,LOC107597950 coding upstream 33570 17884719 ~ 17898867 (-)
thnsl2 thnsl2,LOC107597948,LOC107578849,LOC107735618 coding upstream 52427 17903576 ~ 17912432 (-)
smyd1a smyd1,LOC107745315,LOC107597934 coding upstream 64422 17915571 ~ 17926697 (-)
spra LOC107597947 coding upstream 76638 17927787 ~ 17932419 (-)
LOC122343170 NA non-coding downstream 10121 17828586 ~ 17829943 (-)
G29445 NA non-coding downstream 15800 17823219 ~ 17824264 (-)
G29442 LOC107599601 non-coding downstream 17594 17819360 ~ 17822470 (-)
G29440 NA non-coding downstream 22131 17817562 ~ 17817933 (-)
G29420 NA non-coding downstream 26030 17749811 ~ 17814034 (-)
G29457 NA non-coding upstream 22003 17873152 ~ 17940789 (-)
G29487 NA non-coding upstream 133864 17985013 ~ 17985818 (-)
G29656 NA non-coding upstream 529841 18380990 ~ 18409895 (-)
G29662 NA non-coding upstream 584496 18435645 ~ 18465837 (-)
G29663 NA non-coding upstream 585418 18436567 ~ 18461313 (-)
LOC122342228 scgn,LOC107693759,LOC107757885,LOC107669120,LOC107714763,LOC107747999,LOC107663245 other downstream 95521 17734606 ~ 17744543 (-)
G29417 NA other downstream 103790 17735350 ~ 17736274 (-)
srd5a3 srd5a3,LOC107755245,LOC107683999,LOC107665336,LOC107601910 other downstream 201322 17637023 ~ 17638742 (-)
xrcc3 xrcc3,LOC107755221,LOC107683971,LOC107560377 other downstream 717935 17118343 ~ 17122129 (-)
G29135 NA other downstream 822241 17006927 ~ 17017823 (-)
G29473 NA other upstream 119456 17970605 ~ 17979922 (-)
G29653 LOC107663329,LOC107575399,LOC107749046,LOC107758217,LOC107576964,LOC107665206,LOC107571858,LOC107671223,LOC107576424 other upstream 557411 18408560 ~ 18428343 (-)
LOC122343054 NA other upstream 804095 18655244 ~ 18661653 (-)
LOC122342944 LOC107581743 other upstream 841853 18693002 ~ 18735640 (-)
LOC122343082 NA other upstream 1047658 18898807 ~ 18902552 (-)

Expression


Co-expression Network