LOC122343005


Basic Information

Item Value
gene id LOC122343005
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20543132 ~ 20559014 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237273.1
TAGAAACATGGGTGATGTCAAGaatctACAGAAAAGAAGCTATCAGAATCTCCCTGATGACAGTGACTCTTCAGATGAGACAGTTGAATCTCCTTTACTGAAACGAGTTTTTGAAGAACATGGATACACCAAAATAGGACAACTGGGACGAGGGATTTCAGGAATAGTGTATCAGGTGACCAACAATTCTGGAGAGCATTATGTGATTAAACAGATGAACTCCAGAGAAAGGAAGGAGCAGAACGCTGTCCAAATGGAAGTCATGATCCTAGAGAAAATGATCCATGGATATATTGTTTCTTATGTGGAATCATTTGAAGATAAAGAAACTGGACTCTTTTATATTGTGATGGAGTATTGTGCGGGAGGAGATCTTTTCAAGAGGATGAAAAAGCAGGCTGAGGAAGGCTTTTTTGAAGAACAACAGATCCTTGACTGGTTTGTTCAGATTTGTCTGGCCCTTCAGTATCTACACGAGGAGAGGAGGGATATTTGTCACAGAGACATAAAACCTCAGAATGTTTTTCTGACTGAAGATGACTACATCAATCTAGGAGACTTTGGATGCTCAAAAGTGCACACAAGAGCTGATCCTTATGCAAGCTCTGTAGTAGGTGCAGAGCTCTATGTCAGCCCAGAAGGTCGTCAGAAGAAATATAATTCCCCAAGtgaTATTTGGTCATTGGGATGGTTACTCTATAATCTCTGCATGCTGGATGTATGGTCAGATATTAAAAAACGTCGCTTTCAACAAGCATCCCACGATATGGGATATCCCCTTCACTTCTCAGACAAGTGCTCAAAGGATCTACAGGAATTAATCAAGGAAATGCTCAACTGTGACCCTAAAGCCAGACCTTCAGCTGATGAGATTCTAGCAAAACCGTTCCTTTGTGATGCAGTAAAGAGAAACAAGACAATTCCGCAAGCATTTGATCGAAGGTTTATAGTGTCTTTAAAGACCTTTGATGAGGCCTACAATGAGcactataataattttaaaactttagtTAAAGAGTGGGGAGAAACAACAGATGCACTAGAGGACATACATCGTAAATGCACAATAGGCACGCTGTCAGGTTCAGTGATCGGGACAGCTGGTGGAGTCACTGCATTAGTTGGTGCAATACTGGCTCCTTTTACCTTTGGAGCATCTCTGATTGTTACAGGCGTTGGGATTGGAGTTGGAGTTGCAGGTGGTTTAACAGGTGCTGTATCCAGCATTGCAAATACAGTCCAACAAAAATCACTCCGTGAAAACATTACAACATTTCAGAAGAAATTTACAGATGTGACACCACTTTTCGATTCACTGAGTACACTGAGAGAGCTACTGAAAACAGTCAGAAAGTTCAAAGATTTTGTCAGTGACTCTTCTGGCAATGCAGCAATGTCATGcaaaatagacaaaacaaatacattgttTGCCACAGAGCTCATTAATCTAGGTCTGCTGACAAATGTTGGCAGAATGGTTGCTCAAACCGCCAGAGTAGGACGAGCAGCAGCAGAAGCAATAGCTGCAGTCACAGGAGTGTTGAGTGGAATTCTAGTGATTGTTGATACTGTCTTTATAGCAGTGGATTCTATAGACATGCATCAGATGAGACAGGGAAAAGTGTCTGATCCTAAAAAGGTCAAATCAAGTTTACTGAAGTCCATTGCTCAAATGAGGAAAACGCATGGTGATCTTTTAACAGTCTCAAaggaaatacaaaatacaagaaATGACCTAAATGAGTATATAAAAAAGGCCTGGGGTTACAGAGATTTAGAGAGTACAAACATATAAACATGATACTAGTCAGAGACTCTCACAAGATCcttctgatttgtttttctgtttcagtgAAGATAAAGGTTTTGatgaaaattacttaaataagttaaaaaatagaAGACCTAGGACGTATAAGGTCAGACTTTTGCAATCATTCTATGTTGTAAAtatcagaaaatatattaaaggttTTAGACATAAAAAGACTAACAATCACTAATTGATAAAGTAGTGCAAAGAGGCAGTTAAAAGTTGGCCTCAGAGCTGAAATATGTGTTTTTCTGGTAAAACCGTTAATACCAAAGCCTTCATGTGCTCCAGAACTCATAATTACAACTTGCAAACTTGCAAATGTTGACTTGGACCATAAGACAGTTATACCACCTGACTGGGGTGCTATTAAATGCTTTGGCTcagtaaaatgttacatattgtGATCAAGGATTAATGGTAATTATGACATGACATGAATTCAGCTTAACATCTGTGCTTCATTCGTTGTTCATTCTGTAACATGATCATGGCCACTTCAGCTGGAAAATGTGACAACTTTTATCAGCCTTTCAGTAATAATATCTTATAATTATCTTAATGTTCTTGATAATAGGGCCTTGATTATAAACACATACAAgttgctttgttgttgttgttgttttgtgaattgttatgtaaaatgcatgctttgtGAAAAACGTCAAACACAAAGTTATACAGAGGTGCAGGCTTGTTTATGTCGTTTTTTTAAGGATTattgttaaaagaaaatctatttttgGTGTGATTTCATTACTTAATCACTTACTATTTTGATTCATgggtaaacaaaaaaagtcaaatcttaagtattttaaatagtctCATTTTAGTGTATAAGCTCttctgaaaatgattatttttgtattacttcACTGTAGTCTTTATCTTTCTTGTATAATCATGACACAATAagcataatttataataatttgccATATATTagtttgtgtgtatttcactTGATCAAAGTATTTGTGTAAAAGGTGACTTCAATAAATAGTAAGCAAATTCA

Function

GO:

id name namespace
GO:0009913 epidermal cell differentiation biological_process
GO:0008544 epidermis development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237273.1 True 2831 mRNA 0.37 10 20543132 20559014

Neighbor

gene id symbol gene type direction distance location
LOC122342276 NA coding upstream 27503 20505411 ~ 20515629 (+)
LOC122343122 NA coding upstream 66424 20470670 ~ 20476708 (+)
LOC122342275 NA coding upstream 74071 20468226 ~ 20469061 (+)
LOC122342274 NA coding upstream 96996 20443346 ~ 20446136 (+)
LOC122343110 NA coding upstream 150758 20391465 ~ 20392374 (+)
LOC122342277 LOC107741474 coding downstream 74870 20633884 ~ 20638611 (+)
LOC122343085 LOC107561645,LOC107566978,LOC107748257,LOC107741456 coding downstream 81128 20640142 ~ 20644792 (+)
LOC122342964 NA coding downstream 96201 20655215 ~ 20677909 (+)
LOC122342951 NA coding downstream 231161 20790175 ~ 20800541 (+)
LOC122343111 NA coding downstream 343205 20902219 ~ 20906726 (+)
G29927 LOC107681551 non-coding upstream 45264 20497097 ~ 20497868 (+)
LOC122343178 NA non-coding upstream 80790 20459370 ~ 20462342 (+)
LOC122343162 LOC107575631,LOC107741456,LOC107667978,LOC107575420,LOC107741609,LOC107727338,LOC107575457,LOC107566978 non-coding upstream 99907 20440548 ~ 20443225 (+)
G29918 NA non-coding upstream 101126 20323680 ~ 20442006 (+)
G29945 NA non-coding downstream 71806 20630820 ~ 20631329 (+)
G29947 LOC107709565,LOC107727338,LOC107575420,LOC107569100 non-coding downstream 86243 20645257 ~ 20645535 (+)
G30005 NA non-coding downstream 226295 20785309 ~ 20785530 (+)
G30003 NA non-coding downstream 321435 20880449 ~ 20882908 (+)
G30024 NA non-coding downstream 351140 20910154 ~ 20975778 (+)
G29921 NA other upstream 174316 20367675 ~ 20368816 (+)
LOC122342270 NA other upstream 196408 20344346 ~ 20346724 (+)
LOC122343063 NA other upstream 499679 20037933 ~ 20043453 (+)
G29835 NA other upstream 757004 19731262 ~ 19786128 (+)
G29961 NA other downstream 137658 20696672 ~ 20706846 (+)
G30058 NA other downstream 559548 21118562 ~ 21142831 (+)
LOC122342286 LOC107578117 other downstream 610179 21169193 ~ 21174340 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other downstream 809629 21368643 ~ 21761181 (+)
G30119 NA other downstream 829179 21388193 ~ 21630120 (+)

Expression


Co-expression Network