LOC122343006


Basic Information

Item Value
gene id LOC122343006
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22429074 ~ 22431623 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237275.1
CATACATCTCAGTGGTACAGGCACAAAAGTCATGGAACTAGAACAAGTTGTTGGACAAAAGACCAGTGAGGAGGAACTGGACAGAGATAAAGATATTTGTGGTAATAAGGACCACAAATCTAAAGAAAGAGCCCAAAACCACAGAATTGTTTTGAGTACAGTATGCTTTGGCATCGTATGCATTTCCATTTTGGCTGGCATTGTAGTACTGCATATCAAGCTCATGGCAGATAAAGATACACAGATGTTACTGTCCAGTTCAAGATGTCAAACTGAGAAAGACCAGCTACAGAACGACTTTAACTCTCAGAAGAATCACGAGTTGAAGAAAACAGTCAATGATACCACTTTTGAAACAAGCCAGTTACTGAAATATTGTGAGTCTGTGAATGAGAAGAATCAGGAAATGATGAAAAGAGTCAATCAGCTCTCTTTTGAAAAAACTTGTGACTCTTTGAATCAGACAAAACTGGAGCTGGAAAAGAGAATTGACAAACTTGCTTCTGAAAAAAGCCAGTTACTGGGACGTTTTGACTCTTTCAGTCAGAGGAATCAGGAGTTGGAGAAAAGAGTCAATCAGCTCTCTTTTGAAAAAAGCCAGTTGCAGGGAACTTGTGACTCTTTGAATCAGACAAAACTGGAGCTGGAAAAGAGAATCGACAATCTTGCTTCTGAAAAAAGCCAGTTAAATGGAAGTTTTGACTCTTTCAGTCAGAAGAATCAAGAGTTGGAAAAAAGAGTCCATGATCTCTCCTCTAAGAAAAGCCAGTTACAGGAAAGTTTTGACTCTGTCAGCCAGAAGAATCAAGAGTTGGAGAAAAGAGTAGATGATCTCTCCTCTAAGAAAAGCCAGTTACAGGAAAGTTTTGACTCTTTGAATCAGACAAAACTGGAGCTGGAAAAGAGAATCGACAATCTCACTTCTGAAAAAAGTCAGTTACAGGGACGTTTTGACTCTTTCAGTCAGAAGAATCAAGAGTTGGAGAAAAGAGTCAATGATCTCTCCTCTAAGAAAAGCCAATTACAGAGAAATTGTGAGTCTGTGAATGAGAAGAATCAGGAAATGATGAAAAGAGTCAATCAGCTCTCTTTTGAAAAAAGCCAGTGGCAGGGAACTTGTGACTCTTTGAATCAGACGAAACTGGAGCTGGAAAAGAGACTCGATAATCTTGCTTCTGAAAAAAGCCAGCTACAGGGACGTTTTGACTCTTTCAGTCAGAAGAATCAAGAGTTGGAGAAAAGAGTCGATGATCTCTCCTCTAAGAAAAGCCAGTTACAGGAAAGTTTTGACTCTTTGAATCAGACAAAACTGGAGCTGGAAAAGAGAATCGACAATCTCACTTCTGAAAAAAGCCAGTTACAGGGAGATTTTGACTCGTTGAGTCAGAAGAATCTGCAGTTAGAGGCAGAACtaaaaaagttacttaaaaaAGgtttTGTGTTCTGGTACAGTGACGTGATGACCTGGTCTGACAGCAGGCAGTACTGCAGGGATCAGGGTGGTGATCTGGTCATTATCAAAAGTGAAGACAAGCAGACATTAATTTCTTCAGTGGTCAAGGAGATTGTGTGGATTGGTTTGTCTGATGTAAAAATTGAGGGGGAAATGAAATGGGTGGATAATTCATCGCTGAATCAAACGTTTTGGTCTGGAAACGAGCCAAATAACGAGGGTGGAAATGAGGGCTGCGTCGAACTGATACCTTCGTACGCTATCCTGAAAAACTGGAATGATGTCCCATGCTCACAGAAGAGAAGAGGGATCTGTGAGAAGTAGCTTTGCTTCCTTTATCTTCCTGACACTTAAtagctattttaataatataattgctTTTATAATTTCTCTATTAAAAATAGGCTTTTGATTTTTACTGCAGTAATAAATCTCACAGCATTCTGCTTCTAATTTTTTCGATCTGAAGAGTTGACCATATCCTGCAAGCAAATGTTAAGCATACTGCTTACAGTATTTTAgtcaaatgaaatacaataaagtaaAAGTAGCGGCACTTCTTCTTTTGGTTTTGCCAGGAGATAATTGATCTACTATtagtttaattgatttttatttacattttgctttgttATCTTTCTTGAAAGTGATTgctttttttcatgaataaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237275.1 True 2125 mRNA 0.38 5 22429074 22431623

Neighbor

gene id symbol gene type direction distance location
LOC122342948 LOC107575457,LOC107741609 coding downstream 33474 22385863 ~ 22395600 (-)
LOC122342947 NA coding downstream 94281 22325510 ~ 22334793 (-)
LOC122343126 si:ch211-232d10.1,LOC107747635,LOC107569099,LOC107698614,LOC107574820 coding downstream 108977 22315908 ~ 22320097 (-)
LOC122343076 LOC107718513,LOC107692125 coding downstream 190067 22235757 ~ 22239007 (-)
LOC122343106 NA coding downstream 550282 21870415 ~ 21878792 (-)
LOC122343060 LOC107677814 coding upstream 63663 22495286 ~ 22499529 (-)
LOC122342313 LOC107703281,LOC107657504,LOC107693510,LOC107570418 coding upstream 136601 22568224 ~ 22577494 (-)
LOC122342314 LOC107575554,LOC107666720 coding upstream 146723 22578346 ~ 22585463 (-)
LOC122343061 LOC107677814 coding upstream 156100 22587723 ~ 22593908 (-)
LOC122342315 NA coding upstream 168923 22600546 ~ 22608778 (-)
G30506 NA non-coding downstream 317 22425592 ~ 22428757 (-)
G30499 NA non-coding downstream 7121 22359217 ~ 22421953 (-)
LOC122343195 NA non-coding downstream 31051 22396518 ~ 22398023 (-)
G30465 NA non-coding downstream 147885 22280672 ~ 22281189 (-)
G30423 LOC107575420,LOC107667978,LOC107563545 non-coding downstream 619456 21676876 ~ 21809618 (-)
G30518 NA non-coding upstream 55152 22486775 ~ 22487119 (-)
G30520 NA non-coding upstream 55797 22487420 ~ 22488169 (-)
G30525 NA non-coding upstream 68539 22500162 ~ 22501174 (-)
G30547 NA non-coding upstream 138012 22569635 ~ 22570058 (-)
G30920 NA non-coding upstream 339232 22770855 ~ 22772854 (-)
G30450 NA other downstream 183914 22128454 ~ 22245160 (-)
G30457 NA other downstream 212604 22216035 ~ 22216470 (-)
LOC122343153 NA other downstream 645483 21387853 ~ 21783591 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other upstream 985268 23416891 ~ 23437015 (-)
G31017 NA other upstream 1046902 23478525 ~ 23546369 (-)
G31050 NA other upstream 1313863 23745486 ~ 23771768 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other upstream 1678601 24110224 ~ 24110673 (-)
G31134 NA other upstream 1872473 24304096 ~ 24497596 (-)

Expression


Co-expression Network