LOC122343013


Basic Information

Item Value
gene id LOC122343013
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22759421 ~ 22769574 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237282.1
GAATCTAATCAAAATATGCTCAAaggcctgatcacacacacaaaagacacTACTGTGAGCATCAGAAAAATAAGTGCACACattaaacaattacaaaaacaggACATCTCAGATGAAACTTCAGTCAACCTATTCTACTGCTTACTTGAGCTCAAAGATCATTCATTATATGAGGAAATAAATCAATACTTAAGTTCAAATAAACGTCCAGAAAGAGACCTCTCCTCTTCAATGTGCACAGTGCTGACCTATGTATTGCTGATGTCAGAGAAGGTACTGGAGGAATTTAATCCAAAGCAGTACACGTCCTCATCTTCAAACTTCAAGAGACTTGTCCCAGCTGTGAGATGCTGCAAAAAAGCACTATTTGATGGCTGTGGTCTTGATGAAAAATACTGTGAAACTGTGTCTTCAGCTCTACAACTGACAAATTCCCATCTGACAGAGTTGGACTTAAGTAGCAATGACCTGAAGGATTCAGGAGTAAAGCTGATTTATGATGGCCTGAAGAGTCCACACTGTCAACTAGGCATACTGAGACTATGTGGATGTAATCTCACTGCAAAGTCCTGTGAAAGCTTGGCTTCTGCTCTACAATCCTCAAGCTCTGTcttgagagagctggacctgagtaacaatgacctccatgattcaggagtgaagcttcttTCTGATGGACTAAAGAGTCTAAACTGTCAACTGAATATACTGAGATGTTCTAtatgtaatctcactgcacagtcttgtgagagtttgtcttcagttttacaatcctcaaactctctcctgaaagagctggatctgagtaacaatgacctgcaggattcaggactAAAGCTTTTTTCTGATGCACtaaagagtccaaactgtcagcTGGATATATTGAGgttgtctggctgtatggtgacagaggaaggctgtcattatttgtcttcagctctgacttcaaacccctcacacctgagagagctggatctgagctacaatcatcctggagattcaggagtgaagctgctctctgaaaaactagAGGACTCAACCTGCTCATTGGACAAACTCAATGTGGATCATGGAGGAGAATCCAGGATTAAAGAAGGACTGAAAAAATacgagtgttttttcacactggatccaaacacagcataCACTTGTCTCTATCTGTCTAAGAAGAACAGAAAGGTGATGCATGTGTCTCagtcgtatcctgatcatccagacagatttgatgatGTTTGTCAGGTGTTGTgtcgagagagtgtgtgtggacgctgttactgggagactgagtggaCTGGGCTTGTGCATATATCCGTGTCCTATAAAAGAGGTGATGAGTCTGTGTTTGGACgcaatgatcagtcctggagtttgtgCTGCTCTCCTCACAGATACTCATTCATACACAATAACATAGAGACTGATCtctctgtgaagcccatcaTGAACAGAAGAATAGAAAGAACAGGAGTGTATGAATATATTTctagagtaggagtgtatgtggatgagagcgcaggaactctgtccttcttctgcatctctgacacaatgagactcatccacacagtccagaccacattcactcagacactctgtcctgggtttactgtttattataaatcatcAGTGAAtctgtgttgatgaatcagaagagactgagCAGAGATTCTACCCATAATGCTTTGAGCTGCGTGGCAAATTAGTAACAATGAGATGACATCAATACTGCAGCTCAACTTCTGTCACTGAAATAACAGAATAATGCTTGAGAAATACTCAAAGgcagataagtgtgtgtgtgagtgtgagagagggagagtcaTGCTAAGTGATGATGTGAATCTGAATTTATGAGcctacatttgtgttttaattattgtgtgcctttaataatttgtattattctcAAAATTACCTTTCAATTCAAATGTGTCTTTCACAAACATGTCATTCTCTGTTttgtacagaaataataaaagacgGTGACGGATCAACTTGAGATGAGACtgagattacatttttttaatgaataaagtcGATTCCTCACAAAAATGAAacgaacaaaaataataaaataaaatgtgctctTAAAATGTACTCTTCACCCTGATTAAGATCTGTTTATGTGCACAAGCGCTCATCTGACAAAATTTAAAAGCTGAGAGTCCTGAGACCTTGTTTAATATCAGAAGTAACATGATCTTTCATCTCTGTTGATGTGttgtcagttttctctttgctctgcgatgtatttttcactgtgtgagaaCATGTGTGTGGTTTCAGAGCTGCATTGTTTGTCGGGCATTAGCTCTTACTATGTTCGATCACAAGTAAATGATTTCGTCCAGGAAttgtaaaatcaaaatgttaaaccaaaaaaactaaGGTATTACTCACAACAATCGTTGTATCTTGCTATTTTAACTTACACTCTGTGTGTACTAATCCATGTTGCTTAAAGATGAACATGCTTTGAGCGGGATCGACTAATTTATGTGGAAACATCAACATCCTAATTTCTGCTTGGCTGATGCCATTTAACTCCATGTAACTCGGCAGAGACCTTTCTCCGTAAGTAGCTATATTTAGTCTCAAAATTGCTGAATTGGCAACACTGCATGTGAACCCGTCAAAGATAAATGTGATTGTAAGGATGACACCATTAGCATGCTGCACAAGATGTCATGTGCGTCATTCAAATTTGCTCCTCATAATACAACattctgaataaattatgcaaactgTACATAAGAACACGATAAATGTAAAACACTatagaaattaattttgattatgTTCACTCACATTTAACATTGTATAATCATTAACTCAGTTACATTCTCCCCACTGAACTTAGTATGCATCTATCAAAAATTCTGCCAATAAACACTTTCCCCACCA

Function

GO: NA

KEGG:

id description
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237282.1 True 2904 mRNA 0.39 7 22759421 22769574

Neighbor

gene id symbol gene type direction distance location
LOC122343088 znf728,LOC107572918,LOC107713773 coding downstream 66711 22690338 ~ 22692710 (-)
LOC122343051 LOC107710267,LOC107704474,LOC107730816 coding downstream 78216 22676458 ~ 22681205 (-)
LOC122342316 NA coding downstream 115641 22637421 ~ 22643780 (-)
LOC122342315 NA coding downstream 150643 22600546 ~ 22608778 (-)
LOC122343061 LOC107677814 coding downstream 165513 22587723 ~ 22593908 (-)
LOC122343143 NA coding upstream 12088 22781662 ~ 22782254 (-)
LOC122343148 NA coding upstream 70442 22840016 ~ 22856132 (-)
LOC122342322 NA coding upstream 426973 23196547 ~ 23197615 (-)
LOC122342323 NA coding upstream 431896 23201470 ~ 23219173 (-)
LOC122342324 NA coding upstream 460468 23230042 ~ 23237080 (-)
G30547 NA non-coding downstream 189363 22569635 ~ 22570058 (-)
G30525 NA non-coding downstream 258247 22500162 ~ 22501174 (-)
G30520 NA non-coding downstream 271252 22487420 ~ 22488169 (-)
G30518 NA non-coding downstream 272302 22486775 ~ 22487119 (-)
G30506 NA non-coding downstream 330664 22425592 ~ 22428757 (-)
G30920 NA non-coding upstream 1281 22770855 ~ 22772854 (-)
G30926 NA non-coding upstream 17972 22787546 ~ 22789302 (-)
G30938 NA non-coding upstream 88685 22858259 ~ 22861620 (-)
G30967 LOC107561645 non-coding upstream 282174 23051748 ~ 23053620 (-)
G30992 NA non-coding upstream 494158 23263732 ~ 23264216 (-)
G30450 NA other downstream 514261 22128454 ~ 22245160 (-)
G30457 NA other downstream 542951 22216035 ~ 22216470 (-)
LOC122343153 NA other downstream 975830 21387853 ~ 21783591 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other upstream 647317 23416891 ~ 23437015 (-)
G31017 NA other upstream 708951 23478525 ~ 23546369 (-)
G31050 NA other upstream 975912 23745486 ~ 23771768 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other upstream 1340650 24110224 ~ 24110673 (-)
G31134 NA other upstream 1534522 24304096 ~ 24497596 (-)

Expression


Co-expression Network