LOC122343024


Basic Information

Item Value
gene id LOC122343024
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21644319 ~ 21650178 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237300.1
CGTTCACTGTTGAGTAGTGATGAAGAAACCGAGcgctgctttttttaaaaatattaactattgTGATCGAAACTTGATTTTTAGTCTCCCTTAAAAGTGTAATGAGGGCATTTACAAACCACCTGCAAGTACATTCAAAGTGTAATGAATACcagatataaaacaaacaagtgcttgtcatctgtaaatatattttattcagGACAGAGCTACTGAGATCCATGTGACACCGTTATAAAGATGGAGTTTCTGAAAGTGGAGCTTGAAGACGCGTTCACGGTCGAGCCAGAAGATACTGAGACCCAGCTGAAGATGGTGTTCATTAAAGAGGAGAGTACAGACGTGAAGATCGAAGAAGCGTTCATCAAGCAGGAGGAAGCCGAGGAACAAATCAAGACCGCGTTCATCAAAGAGGAGCGTGAAGAAACTTTCAGAGTCAAACTTGAAGATGCTGAAGAACCAACAGACTCAACAGTGCTGAAAGAGGAGCAGGAAGAAACTGAAGAGAAATATCAGTATGAGAACCCTCATGATTTCCTAGAAAAATCATTTAGTAGTTTACAGTCTGAAAAGAGTTCCACACAAAAAAGGGATGGGATTCGTTTCCCCTGctttcagtgtggaaagagttttagtCGTAAGGCAACCCTCAAAAGCCACATGAAAACTCACCCTGAAGAGAATATGTTCACCTGCACACACTGTGGAAAAAGTTTCGGCACAAAATTGAAACTGAAATACCACACGAAAGTTCACAACGGAAACAAACCCTTCACGTGCAAACAGTGTGGAAGGAGCTTCACTCAGAAAGGAAGCCTTAAGAAGCACATGGCCATTCACACTGGAAAGAGGCCTTACGCGtgccctcagtgtggaaagagcttcagTCAAAAGGGAGGCCTCAAGAAGCACATCTCAACTCACACAGGGGAGAAGCCGTTCACATGCCCTCGgtgcggaaagagtttcagCCAAAAGGGAGGCCTTAAGATCCACATgaggattcacaccggagagaagccgttcacATGCcctcagtgcggaaagagttttAGTCAAAAGGAAGGTCTTAAGAAGCACGTGAcgattcacaccggagagaagccttacgcGTGCCCTCGGTGCGGAAAGAGCTTCAGTCAGCGAGGAAGCCTCGAGGgccacatgagagttcacaccggagagaagccgttcacATGCACTCACTGCTTGAAGAGTTTCAGTCACTCCGGATCCCTTAGATACCACATCATGAAAGTTTGCAATAAAGAGAAGCCCGACAGATCCCcccagtgtggaaagagttccGGTCAAAGTGGAAAACACGGGGCGCTTCAAGCCGAGAACAAGCCTTTCACGTgcaaacagtgtggaaagagtttcactcAAAAAGGAAACCTCAACAAGCACGTGAccattcacaccggagagaagccgttcacGTGCAAACAGTGCGGAAAGGGATTCACTCAAAAAGGAGGCCTTAATATGCACATGAGGATTCACACCGGGGAGAAACCTTTTACGTGcgatcagtgcgggaagagttaCCCTCGAAAAGGAGGCCTCAAGATACACATGAGAACTCACACCGGGGAGAAGCCTTTCGCTTgcaaacagtgtggaaagagtttcagtcaGCGAGGCAGCCTTGACATGCACATTGAAATTCACAACCGAGAGAAGCCTAAAGGAAAAACTGAAGAAcgaactgaactgaaatgacTTGTCTTTTTAAACTAAATCGGGCTTCTGTAAAGCAGACTCTTTGGGGAGttagttttgaattctaaacaCCTTTGAGCTACCGAGGCGGTTAGTGTGGGTGTGTTCTGAAACTCCACCTTCTTTTGACGCGGGATTTATTTTTCCCTGTTTGTTTCAGGCAAAACGGCAACGTCTCCGATTCATTATATGCATAGTGTGCTGCCACAGATATATCTGCACCTGTATGATTGCTAACGAAAGCAGTTAGTTTCTACGAAGAAATTACAACGGCGCTTGTGTCGATGGCCCGCCGTAGATTTGTAGTTATGCAAAAAGCAACAGAAACATCAGATGCAAGTTTTCCAAAACGATGGTAGCAAGTACCAAATGCATCcgtttgaaataaatactgctgctgctagTGTTCTTCATTCAAGGAGAATTTAAAAGCCATGTTTAGATGAACGTAAACCCCGCCTCCAGCAGCGCCGGAGGGTCAGAATGTTCGGAAACGGTATTATCGTCGCTCAGCCTTTCCAAGCGTCTTTTTGCCCTCAAACAAAGAAcgaaacaactttttttgacGTATATCGAGGCCTTAACAGATCCCCCTCAGTGTGAAGTTTCAGTAAACGAATATAAAACTGTTCCGgttcttgattctgattggctgagccaCATTTTAAACCGCTCTACAAACATACACCTCTTTGTTGTCCGTGTGTTGTTCGGCAACCACAACCCTTTCTGAAGAACTAAGTATGTGGGAtaactattttataaaagcaatatacctttcaaattacattaaatgacagaatattaagtGCAAGTAGCTGTGTAACGGACTCAGTCTGTAACGTGTAACAGTAGCTGTCTGTTACATTCACATAATTATCAACTTGGTTAGCAaaagtattatgtattatgacaccttaaaataaagtgttaccaaaatttgGATGGTAGATTACAATCATTTAATTATGGTTACATGCACAGAAGAAATCGGCCTCCTGCTGTAAAACTCAATGACGAAAGCAAGGATTTGGgaataaatgcaatgcagtgTTGGTGTCTACTCTGAAATGTGTCGCTAACATTTGGTGATGTTGTTATCGAAGTTGAACATTAGTacaatcaaactaaatatttctacCTTGTTTTGCCAGCGttttataaaaccaaaaatattgtCAGAAATGAATGCGTGTTACTGGTTACATCGCAGCTCAAAGTCTTTTTGCCTACAGAACTGATCGCAGACCCAGCGCTTCTCTGAACGTGAACTCGTATATTCAGATGTCCCTATGAGTCCCATCATTATTTGCTTTGCTGTACCCTACTGTAAGCATATTCTAATTTAGCGGCCACTGTCTCTGTAAAGTTAaccaatttgttttatttgttttgtatttctgcGCAACCCCTCATGATACCGACTTAACTGTTGATTGTTCATGTTTTAAAGTAGCCATTTGcccagtttttaaataaacatgagtTACTA
>XM_043237301.1
CTGCGTGACGCCATAAGCATGCGCCGCGCTCCCGCGTCTCTGATTCGGCCGAAGAAAGGACAGAGCTACTGAGATCCATGTGACACCGTTATAAAGATGGAGTTTCTGAAAGTGGAGCTTGAAGACGCGTTCACGGTCGAGCCAGAAGATACTGAGACCCAGCTGAAGATGGTGTTCATTAAAGAGGAGAGTACAGACGTGAAGATCGAAGAAGCGTTCATCAAGCAGGAGGAAGCCGAGGAACAAATCAAGACCGCGTTCATCAAAGAGGAGCGTGAAGAAACTTTCAGAGTCAAACTTGAAGATGCTGAAGAACCAACAGACTCAACAGTGCTGAAAGAGGAGCAGGAAGAAACTGAAGAGAAATATCAGTATGAGAACCCTCATGATTTCCTAGAAAAATCATTTAGTAGTTTACAGTCTGAAAAGAGTTCCACACAAAAAAGGGATGGGATTCGTTTCCCCTGctttcagtgtggaaagagttttagtCGTAAGGCAACCCTCAAAAGCCACATGAAAACTCACCCTGAAGAGAATATGTTCACCTGCACACACTGTGGAAAAAGTTTCGGCACAAAATTGAAACTGAAATACCACACGAAAGTTCACAACGGAAACAAACCCTTCACGTGCAAACAGTGTGGAAGGAGCTTCACTCAGAAAGGAAGCCTTAAGAAGCACATGGCCATTCACACTGGAAAGAGGCCTTACGCGtgccctcagtgtggaaagagcttcagTCAAAAGGGAGGCCTCAAGAAGCACATCTCAACTCACACAGGGGAGAAGCCGTTCACATGCCCTCGgtgcggaaagagtttcagCCAAAAGGGAGGCCTTAAGATCCACATgaggattcacaccggagagaagccgttcacATGCcctcagtgcggaaagagttttAGTCAAAAGGAAGGTCTTAAGAAGCACGTGAcgattcacaccggagagaagccttacgcGTGCCCTCGGTGCGGAAAGAGCTTCAGTCAGCGAGGAAGCCTCGAGGgccacatgagagttcacaccggagagaagccgttcacATGCACTCACTGCTTGAAGAGTTTCAGTCACTCCGGATCCCTTAGATACCACATCATGAAAGTTTGCAATAAAGAGAAGCCCGACAGATCCCcccagtgtggaaagagttccGGTCAAAGTGGAAAACACGGGGCGCTTCAAGCCGAGAACAAGCCTTTCACGTgcaaacagtgtggaaagagtttcactcAAAAAGGAAACCTCAACAAGCACGTGAccattcacaccggagagaagccgttcacGTGCAAACAGTGCGGAAAGGGATTCACTCAAAAAGGAGGCCTTAATATGCACATGAGGATTCACACCGGGGAGAAACCTTTTACGTGcgatcagtgcgggaagagttaCCCTCGAAAAGGAGGCCTCAAGATACACATGAGAACTCACACCGGGGAGAAGCCTTTCGCTTgcaaacagtgtggaaagagtttcagtcaGCGAGGCAGCCTTGACATGCACATTGAAATTCACAACCGAGAGAAGCCTAAAGGAAAAACTGAAGAAcgaactgaactgaaatgacTTGTCTTTTTAAACTAAATCGGGCTTCTGTAAAGCAGACTCTTTGGGGAGttagttttgaattctaaacaCCTTTGAGCTACCGAGGCGGTTAGTGTGGGTGTGTTCTGAAACTCCACCTTCTTTTGACGCGGGATTTATTTTTCCCTGTTTGTTTCAGGCAAAACGGCAACGTCTCCGATTCATTATATGCATAGTGTGCTGCCACAGATATATCTGCACCTGTATGATTGCTAACGAAAGCAGTTAGTTTCTACGAAGAAATTACAACGGCGCTTGTGTCGATGGCCCGCCGTAGATTTGTAGTTATGCAAAAAGCAACAGAAACATCAGATGCAAGTTTTCCAAAACGATGGTAGCAAGTACCAAATGCATCcgtttgaaataaatactgctgctgctagTGTTCTTCATTCAAGGAGAATTTAAAAGCCATGTTTAGATGAACGTAAACCCCGCCTCCAGCAGCGCCGGAGGGTCAGAATGTTCGGAAACGGTATTATCGTCGCTCAGCCTTTCCAAGCGTCTTTTTGCCCTCAAACAAAGAAcgaaacaactttttttgacGTATATCGAGGCCTTAACAGATCCCCCTCAGTGTGAAGTTTCAGTAAACGAATATAAAACTGTTCCGgttcttgattctgattggctgagccaCATTTTAAACCGCTCTACAAACATACACCTCTTTGTTGTCCGTGTGTTGTTCGGCAACCACAACCCTTTCTGAAGAACTAAGTATGTGGGAtaactattttataaaagcaatatacctttcaaattacattaaatgacagaatattaagtGCAAGTAGCTGTGTAACGGACTCAGTCTGTAACGTGTAACAGTAGCTGTCTGTTACATTCACATAATTATCAACTTGGTTAGCAaaagtattatgtattatgacaccttaaaataaagtgttaccaaaatttgGATGGTAGATTACAATCATTTAATTATGGTTACATGCACAGAAGAAATCGGCCTCCTGCTGTAAAACTCAATGACGAAAGCAAGGATTTGGgaataaatgcaatgcagtgTTGGTGTCTACTCTGAAATGTGTCGCTAACATTTGGTGATGTTGTTATCGAAGTTGAACATTAGTacaatcaaactaaatatttctacCTTGTTTTGCCAGCGttttataaaaccaaaaatattgtCAGAAATGAATGCGTGTTACTGGTTACATCGCAGCTCAAAGTCTTTTTGCCTACAGAACTGATCGCAGACCCAGCGCTTCTCTGAACGTGAACTCGTATATTCAGATGTCCCTATGAGTCCCATCATTATTTGCTTTGCTGTACCCTACTGTAAGCATATTCTAATTTAGCGGCCACTGTCTCTGTAAAGTTAaccaatttgttttatttgttttgtatttctgcGCAACCCCTCATGATACCGACTTAACTGTTGATTGTTCATGTTTTAAAGTAGCCATTTGcccagtttttaaataaacatgagtTACTA

Function

GO:

id name namespace
GO:0051536 iron-sulfur cluster binding molecular_function
GO:0051540 metal cluster binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237300.1 True 3217 mRNA 0.43 3 21644545 21650178
XM_043237301.1 False 3073 mRNA 0.44 3 21644319 21650178

Neighbor

gene id symbol gene type direction distance location
LOC122343031 LOC107563545,LOC107564010 coding upstream 191457 21449517 ~ 21452862 (+)
LOC122342295 LOC107573707,LOC107575631,LOC107689603,LOC107741456,LOC107667978 coding upstream 194809 21447240 ~ 21449510 (+)
LOC122342293 NA coding upstream 244171 21398817 ~ 21400148 (+)
LOC122343117 NA coding upstream 264680 21377538 ~ 21379639 (+)
LOC122342289 LOC107685875,LOC107749047,LOC107728228 coding upstream 338683 21292312 ~ 21305636 (+)
LOC122342967 LOC107569100,LOC107575457,LOC107679413,LOC107566978 coding downstream 23542 21673720 ~ 21690532 (+)
LOC122343020 LOC107667978,LOC107741456,LOC107575631,LOC107563545 coding downstream 23624 21673802 ~ 21809079 (+)
LOC122343144 NA coding downstream 91145 21741323 ~ 21742305 (+)
LOC122343035 NA coding downstream 158978 21809156 ~ 21814437 (+)
LOC122342305 LOC107697548,LOC107574116,LOC107758214 coding downstream 191003 21841181 ~ 21842230 (+)
G30133 LOC107749047,LOC107571854,LOC107728228,LOC107669894 non-coding upstream 117308 21485712 ~ 21527011 (+)
G30132 NA non-coding upstream 122066 21479557 ~ 21522253 (+)
G30136 NA non-coding upstream 144805 21498864 ~ 21499514 (+)
G30134 NA non-coding upstream 145938 21496823 ~ 21498381 (+)
G30110 LOC107718524,LOC107563870 non-coding upstream 269782 21369422 ~ 21374537 (+)
G30130 NA non-coding downstream 98832 21749010 ~ 21811284 (+)
G30205 NA non-coding downstream 491166 22141344 ~ 22255433 (+)
G30206 NA non-coding downstream 512460 22162638 ~ 22240294 (+)
G30212 NA non-coding downstream 524777 22174955 ~ 22252519 (+)
G30226 NA non-coding downstream 600257 22250435 ~ 22251792 (+)
G30115 NA other upstream 2563 21639540 ~ 21641756 (+)
G30119 NA other upstream 14199 21388193 ~ 21630120 (+)
LOC122342286 LOC107578117 other upstream 469979 21169193 ~ 21174340 (+)
G30058 NA other upstream 501488 21118562 ~ 21142831 (+)
G29961 NA other upstream 937473 20696672 ~ 20706846 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other downstream 581292 22231470 ~ 22231924 (+)
LOC122342310 LOC107685875,LOC107671223,LOC107749047,LOC107728228,LOC107576424 other downstream 646719 22296897 ~ 22305148 (+)
LOC122343019 LOC107705900 other downstream 1011648 22661826 ~ 22682712 (+)
LOC122342317 NA other downstream 1127805 22777983 ~ 22780139 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other downstream 1478928 23129106 ~ 23130189 (+)

Expression


Co-expression Network