LOC122343029 (LOC107717679,LOC107693607,LOC107575410)


Basic Information

Item Value
gene id LOC122343029
gene name LOC107717679,LOC107693607,LOC107575410
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24144732 ~ 24149459 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237309.1
ACACACTGTTATATAAAGATGGCGTTTATTAAGGAGGAGAGTGAAGACGTAAAGATTGAGGAAGATTTCAGAGTCAAACAAGAAGATCCTGAGAAACAGACAGTTCAGCTTGCTGGATTTGTGAAAGAACCAACATTGACAAGTAGTTCCAAGATCACGGTTTACACCTACCTGACGCCGCTGAAAGAGGAGAGTCAAGAACTGAATAAAATGGAacagaaaaatgagaaaagctACGACTTCATGACTGAGGAAGAATCATTTAGTTTCTCACAGCCTCATAAAACAGAAACTAGGAATACTGAAGTCCACACTGAAGAGAGTCATTTTAGCTGCCAACactgtggaaagagttttagtAGAAAACAAAGCCTGAAAATCCACTTAAaaatccacactggagagaagctgTTCATAtgccctcagtgtggaaagagttttacaatgaaaaaaacacttagtgcccacatgagagttcacactggagagaagccttactcCTGCGAACTGTGTGAGAAGGGTTTCTCACGGAAAGAAAGTCTTAACAtacacatgagaattcacaccggagagaaaccttatCCCTGCCAACACTGTGGGAAGAGCTTCTCAGTAAAAGGAAATCTAAAAATTCACCtgagagttcacaccggagagaagcccttcatctgctctcagtgtggaaagagcttctCTGTAAACAGACACCTTGAAGTCCACATGCGAGatcacaccggagagagactGTTCATCTGCTCTCAGTGTGCAAAgagttttaaacagaaaaaagaactTGAAGCCCACATAAaaattcacactggagagaagccttactcCTGCAAACTGTGTGGGAAGAGCTACAAAATCAAAGCGATCCTTAACAttcacatgagagttcacactggagagaagccgttTGCTTGCGATCGgtgtggaaagagcttcagGTACAAAGAAAGCCTTAATCATCACATGAGGATTCACTCTGGAGAGGACTGTTTCACATGCCACCAGTGTGAAACGAGTTTCCCAGACAGAAATCACCTCGAGAATCATGTAAAACTCCACACCGGAGTGAAGCTTTTCATGTGTCCTCactgtggaaagagtttcaaacAAAGAGTGAACTTTATGAATCACTTGAGAATTCACtctggagagaaacctttcTCCTGCCAAGAGTGTGGAAGGAGCTTCGCGGTCAAAGGAGGTCTTGAGTATCACATGAAACTTCACTCTGGAGAGAAGCCCTTCACCtgccctcagtgtggaaagagcttcacAAATAGAGGAAACCTTAAGACTCACATTAGggttcacactggagagaagccttacaagTGTCCTCAGTGTGACACCAGCTTCTCGTATCACACAGAACTGAAACGGCATTTGCGAACTCATTCTGGAGAGAAATTGCTGTTTTCCTCAGGGTGACAAGGTTCAGGTAAACGAGCAAATTCAACAGTCATTGTCTTTCTCAAGAGTAAATTCAGTTAAAATTGTGATTagtgtaataaaaacatcaaacaaatgGAAAGTCA
>XM_043237310.1
TTAGAGGTTTAAATCAGTGCAGAGCGCTTTAACGAATGATTCTCGAGTGTAATGTGATGTATCTAACAGCGTTCAGACAAACTCGAGTCACTGAAAAGACTCGCTCGTTCCCTTTATTGTGAAGCGGTTCATCATAAACactgtttatattcattttgGCGAATGTCTGTCAGTTTGGTCAAATGTTGTTTAAGTGCTGGACTCACAGTGTTTTATAACTCGACAGAGTTATAAAACACTCACACTGAGTTGTATATTAAATCTACAAAccaatacatacaaatattcaatattacgTCTTGTATTCAAATATTACGCCTGTGTTCTTCCGTCATTAACATTATTCTGTCTGTTAATTATTCTCGTTTTAACATGCAGACAAACTCCTGTAACACACTGTTATATAAAGATGGCGTTTATTAAGGAGGAGAGTGAAGACGTAAAGATTGAGGAAGATTTCAGAGTCAAACAAGAAGATCCTGAGAAACAGACAGTTCAGCTTGCTGGATTTGTGAAAGAACCAACATTGACAAACCTGACGCCGCTGAAAGAGGAGAGTCAAGAACTGAATAAAATGGAacagaaaaatgagaaaagctACGACTTCATGACTGAGGAAGAATCATTTAGTTTCTCACAGCCTCATAAAACAGAAACTAGGAATACTGAAGTCCACACTGAAGAGAGTCATTTTAGCTGCCAACactgtggaaagagttttagtAGAAAACAAAGCCTGAAAATCCACTTAAaaatccacactggagagaagctgTTCATAtgccctcagtgtggaaagagttttacaatgaaaaaaacacttagtgcccacatgagagttcacactggagagaagccttactcCTGCGAACTGTGTGAGAAGGGTTTCTCACGGAAAGAAAGTCTTAACAtacacatgagaattcacaccggagagaaaccttatCCCTGCCAACACTGTGGGAAGAGCTTCTCAGTAAAAGGAAATCTAAAAATTCACCtgagagttcacaccggagagaagcccttcatctgctctcagtgtggaaagagcttctCTGTAAACAGACACCTTGAAGTCCACATGCGAGatcacaccggagagagactGTTCATCTGCTCTCAGTGTGCAAAgagttttaaacagaaaaaagaactTGAAGCCCACATAAaaattcacactggagagaagccttactcCTGCAAACTGTGTGGGAAGAGCTACAAAATCAAAGCGATCCTTAACAttcacatgagagttcacactggagagaagccgttTGCTTGCGATCGgtgtggaaagagcttcagGTACAAAGAAAGCCTTAATCATCACATGAGGATTCACTCTGGAGAGGACTGTTTCACATGCCACCAGTGTGAAACGAGTTTCCCAGACAGAAATCACCTCGAGAATCATGTAAAACTCCACACCGGAGTGAAGCTTTTCATGTGTCCTCactgtggaaagagtttcaaacAAAGAGTGAACTTTATGAATCACTTGAGAATTCACtctggagagaaacctttcTCCTGCCAAGAGTGTGGAAGGAGCTTCGCGGTCAAAGGAGGTCTTGAGTATCACATGAAACTTCACTCTGGAGAGAAGCCCTTCACCtgccctcagtgtggaaagagcttcacAAATAGAGGAAACCTTAAGACTCACATTAGggttcacactggagagaagccttacaagTGTCCTCAGTGTGACACCAGCTTCTCGTATCACACAGAACTGAAACGGCATTTGCGAACTCATTCTGGAGAGAAATTGCTGTTTTCCTCAGGGTGACAAGGTTCAGGTAAACGAGCAAATTCAACAGTCATTGTCTTTCTCAAGAGTAAATTCAGTTAAAATTGTGATTagtgtaataaaaacatcaaacaaatgGAAAGTCA
>XM_043237311.1
GATTCTACCGAAGAAGACAAACTCCTGTAACACACTGTTATATAAAGATGGCGTTTATTAAGGAGGAGAGTGAAGACGTAAAGATTGAGGAAGATTTCAGAGTCAAACAAGAAGATCCTGAGAAACAGACAGACCTGACGCCGCTGAAAGAGGAGAGTCAAGAACTGAATAAAATGGAacagaaaaatgagaaaagctACGACTTCATGACTGAGGAAGAATCATTTAGTTTCTCACAGCCTCATAAAACAGAAACTAGGAATACTGAAGTCCACACTGAAGAGAGTCATTTTAGCTGCCAACactgtggaaagagttttagtAGAAAACAAAGCCTGAAAATCCACTTAAaaatccacactggagagaagctgTTCATAtgccctcagtgtggaaagagttttacaatgaaaaaaacacttagtgcccacatgagagttcacactggagagaagccttactcCTGCGAACTGTGTGAGAAGGGTTTCTCACGGAAAGAAAGTCTTAACAtacacatgagaattcacaccggagagaaaccttatCCCTGCCAACACTGTGGGAAGAGCTTCTCAGTAAAAGGAAATCTAAAAATTCACCtgagagttcacaccggagagaagcccttcatctgctctcagtgtggaaagagcttctCTGTAAACAGACACCTTGAAGTCCACATGCGAGatcacaccggagagagactGTTCATCTGCTCTCAGTGTGCAAAgagttttaaacagaaaaaagaactTGAAGCCCACATAAaaattcacactggagagaagccttactcCTGCAAACTGTGTGGGAAGAGCTACAAAATCAAAGCGATCCTTAACAttcacatgagagttcacactggagagaagccgttTGCTTGCGATCGgtgtggaaagagcttcagGTACAAAGAAAGCCTTAATCATCACATGAGGATTCACTCTGGAGAGGACTGTTTCACATGCCACCAGTGTGAAACGAGTTTCCCAGACAGAAATCACCTCGAGAATCATGTAAAACTCCACACCGGAGTGAAGCTTTTCATGTGTCCTCactgtggaaagagtttcaaacAAAGAGTGAACTTTATGAATCACTTGAGAATTCACtctggagagaaacctttcTCCTGCCAAGAGTGTGGAAGGAGCTTCGCGGTCAAAGGAGGTCTTGAGTATCACATGAAACTTCACTCTGGAGAGAAGCCCTTCACCtgccctcagtgtggaaagagcttcacAAATAGAGGAAACCTTAAGACTCACATTAGggttcacactggagagaagccttacaagTGTCCTCAGTGTGACACCAGCTTCTCGTATCACACAGAACTGAAACGGCATTTGCGAACTCATTCTGGAGAGAAATTGCTGTTTTCCTCAGGGTGACAAGGTTCAGGTAAACGAGCAAATTCAACAGTCATTGTCTTTCTCAAGAGTAAATTCAGTTAAAATTGTGATTagtgtaataaaaacatcaaacaaatgGAAAGTCA
>XM_043237312.1
GGCGTTTATTAAGGAGGAGAGTGAAGACGTAAAGATTGAGGAAGATTTCAGAGTCAAACAAGAAGATCCTGAGAAACAGACAGTTCAGCTTGCTGGATTTGTGAAAGAACCAACATTGACAAGTAGTTCCAAGATCACGACCTGACGCCGCTGAAAGAGGAGAGTCAAGAACTGAATAAAATGGAacagaaaaatgagaaaagctACGACTTCATGACTGAGGAAGAATCATTTAGTTTCTCACAGCCTCATAAAACAGAAACTAGGAATACTGAAGTCCACACTGAAGAGAGTCATTTTAGCTGCCAACactgtggaaagagttttagtAGAAAACAAAGCCTGAAAATCCACTTAAaaatccacactggagagaagctgTTCATAtgccctcagtgtggaaagagttttacaatgaaaaaaacacttagtgcccacatgagagttcacactggagagaagccttactcCTGCGAACTGTGTGAGAAGGGTTTCTCACGGAAAGAAAGTCTTAACAtacacatgagaattcacaccggagagaaaccttatCCCTGCCAACACTGTGGGAAGAGCTTCTCAGTAAAAGGAAATCTAAAAATTCACCtgagagttcacaccggagagaagcccttcatctgctctcagtgtggaaagagcttctCTGTAAACAGACACCTTGAAGTCCACATGCGAGatcacaccggagagagactGTTCATCTGCTCTCAGTGTGCAAAgagttttaaacagaaaaaagaactTGAAGCCCACATAAaaattcacactggagagaagccttactcCTGCAAACTGTGTGGGAAGAGCTACAAAATCAAAGCGATCCTTAACAttcacatgagagttcacactggagagaagccgttTGCTTGCGATCGgtgtggaaagagcttcagGTACAAAGAAAGCCTTAATCATCACATGAGGATTCACTCTGGAGAGGACTGTTTCACATGCCACCAGTGTGAAACGAGTTTCCCAGACAGAAATCACCTCGAGAATCATGTAAAACTCCACACCGGAGTGAAGCTTTTCATGTGTCCTCactgtggaaagagtttcaaacAAAGAGTGAACTTTATGAATCACTTGAGAATTCACtctggagagaaacctttcTCCTGCCAAGAGTGTGGAAGGAGCTTCGCGGTCAAAGGAGGTCTTGAGTATCACATGAAACTTCACTCTGGAGAGAAGCCCTTCACCtgccctcagtgtggaaagagcttcacAAATAGAGGAAACCTTAAGACTCACATTAGggttcacactggagagaagccttacaagTGTCCTCAGTGTGACACCAGCTTCTCGTATCACACAGAACTGAAACGGCATTTGCGAACTCATTCTGGAGAGAAATTGCTGTTTTCCTCAGGGTGACAAGGTTCAGGTAAACGAGCAAATTCAACAGTCATTGTCTTTCTCAAGAGTAAATTCAGTTAAAATTGTGATTagtgtaataaaaacatcaaacaaatgGAAAGTCA

Function

NR:

description
PREDICTED: gastrula zinc finger protein XlCGF26.1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237309.1 False 1544 mRNA 0.42 3 24145145 24149459
XM_043237310.1 True 1908 mRNA 0.41 3 24144754 24149459
XM_043237311.1 False 1507 mRNA 0.42 3 24144732 24149459
XM_043237312.1 False 1514 mRNA 0.43 3 24145165 24149459

Neighbor

gene id symbol gene type direction distance location
LOC122342945 LOC107563545 coding upstream 161 23633798 ~ 24144571 (+)
kdm5a kdm5a,LOC107710764 coding upstream 31820 24093880 ~ 24112912 (+)
LOC122343046 NA coding upstream 53380 24084959 ~ 24091352 (+)
LOC122342330 LOC101883771,LOC101885620,LOC108191338 coding upstream 529802 23613478 ~ 23614930 (+)
LOC122343152 NA coding upstream 768861 23351927 ~ 23375871 (+)
LOC122343033 NA coding downstream 3297 24152756 ~ 24156499 (+)
LOC122342331 NA coding downstream 72618 24222077 ~ 24225829 (+)
LOC122342332 NA coding downstream 82907 24232366 ~ 24244625 (+)
LOC122343090 NA coding downstream 95316 24244775 ~ 24252528 (+)
LOC122342333 NA coding downstream 103208 24252667 ~ 24259516 (+)
G30748 NA non-coding upstream 113991 23907305 ~ 24030741 (+)
G30754 NA non-coding upstream 134841 24003642 ~ 24009891 (+)
G30751 LOC107671223,LOC107569100,LOC107575457,LOC107747635,LOC107679413,LOC107566978,LOC107670352 non-coding upstream 143168 23978432 ~ 24001564 (+)
LOC122343177 NA non-coding upstream 168212 23967713 ~ 23976520 (+)
G30746 NA non-coding upstream 315148 23801556 ~ 23829584 (+)
G30819 NA non-coding downstream 160880 24310339 ~ 24314288 (+)
LOC122343172 NA non-coding downstream 268384 24417843 ~ 24419568 (+)
G30812 NA non-coding downstream 306563 24456022 ~ 24486887 (+)
G30877 NA non-coding downstream 565238 24714697 ~ 24714998 (+)
G31223 NA non-coding downstream 839408 24988867 ~ 24989274 (+)
LOC122342990 NA other upstream 3286 24133050 ~ 24141446 (+)
LOC122342976 usp15,LOC107685889 other upstream 13245 24117289 ~ 24131487 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other upstream 976725 23163695 ~ 23168007 (+)
G30632 NA other upstream 984976 23157559 ~ 23159756 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other upstream 1014543 23129106 ~ 23130189 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other downstream 304811 24454270 ~ 24466400 (+)
LOC122343023 LOC107568558,LOC107685877,LOC107725785,LOC107728057 other downstream 315995 24465454 ~ 24471450 (+)
LOC122343159 NA other downstream 486893 24636352 ~ 24638654 (+)
LOC122343125 NA other downstream 489630 24639089 ~ 24646601 (+)
LOC122343086 NA other downstream 523432 24672891 ~ 24674412 (+)

Expression


Co-expression Network