LOC122343034


Basic Information

Item Value
gene id LOC122343034
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18923263 ~ 18927380 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237328.1
ATCTACAAAGAAGAAGAGCCTGGTCTTTACAAAAACAACGCAGCTGCTGCAATGTTTTGAGGCGTTTGTTTCTAAACAGACAGTGGATCATTATGATTCTCGATTCACTTTTGAAAGCTTAGAAAGTGAGGGTTCATGTTGTTGGGGCTGAAAGCGTGAAAATGGATTTGCTAACTGTGGAAGATCTTTCCTGTCCTGTGTGTGGTGAGATCTTCAAGTCTCCTGTTGTTTTGTCATGCAGCCACAGCGTGTGTAAAGAGTGTCTTCAACAGTTCTGGAAAACAAAGGAAACTCAGGAGTGTCCTTACTGTGGGAGCAAACTATCAAAATGTGATCCTCCAGATAATCTCGCATTGCAAAACTTGTGCGAGATGTACCTgaaggagagaaaagagaaatgtCTATCAGAAGCTGAGGAGATCTGCGGCTTACACAGTGAGAAACACAAACTCTTCTGTCTGGAGGACAAACAGCCTGCTTGTGCAGAGTGTTTTACTTCTCAAACACATGTTAATAACACATGTGAAGTTGTTCCATCGTATAAGGAGCAGCTCGCTGCAGCACTTAAGTCCTTGCATGAAAGACTTCTACAGAGTGAAAACATTATAGGAGAGTTTGAGAAAACCCTTCAACACATCTGGtctCAAGCCGACAACACGGAGCATCAGATTAAACAGCAGTTCGAAAAGCTTCATCAGTTTCTTAGAGACGAAGAAGCAGCTATAATCACTGCCctgagggaggaggaggagctgaAGAAGCAGATGATGAGGGAGAAGCTGGACGAGATGAACAGACACATACTGATTCTTTCACACACGATCAAAGACACAGAAGAGATGATGATAGCCAATGACGTCTGCTTCCTAAAGGAGTTTCCAGTCTCAGTCGAAAGACTCCAGATCTTATCACAGCCAGATCTTCAGTTGACTCCTGGAGCTTTGATTCACGTGCCACGCTACTTGGGCAACCTGCCCTTCAGGATCTGGAAGAAGATGCAGGACATCATCCAAAACACTCCTGTGATCCTGGATCCAAACACTGCAAATCCACGCCTCACCTTGTCTGATGATCTGACCGGCGTGAGACGGAGCAACTATCAACCCGTTCCTGACAATCCGGAGAGATTTGACTGTTATCGCTGTGTCCTGGGTTCGGAGGGGTTTAACTCAGGAACACACTACTGGGATGTGGAGGTCAAAGAAGGTTCAGTCTGGACTCTTGGAGTAACTACAGCATCCAATCAGAGGAAAGGATGGGATTTTTTCAACACCGATGTCTGGAGCTTGCAATACAATATGTCTAGACAGTCTGGCTTCCCTGTCTTGCAGCAGCTTGACCGTGTGAGAGTGGTTCTGGACTATGATGGAGGAACGGTGTCATTCATTGATCCTGTAACCAGCATGCATCTACACACGTTCAAGACCACCTTCACTCACACACTATTTCCATTCTTCAGTACTCCGGACACTCTGAGGATTTTACCGGTCAGTAGCCAGTGATTGTTACTCCTGTAGGTCTGGATCTTTCTGCTTTCATCTGATCAGATCTTCTGAATTCTTTTTCCAGTGTTTAACCACTGaaatagttaaattaaaacattttcagttgtgaattatttttcatCGTATTAAATGGATGTAAAAGATTCTTGCTGGCCCACAACAGCGTAGAATGAAATAGAAATGGACCTTTTTCACAGTTGTGTGTTCAAAAAGCGGACGTTTGAATAGTTgtgcaatttattattatttattttccttccGATACAATCATCATGCATTCAATTGggtgtgttaaaataaattgacacttttttttgtgtgtgattggACAGCGTTGTACTTTAGATAATATTGGAGATGAATCTTCATGAAGATGGTGCAATATTACAAACtattaaagtgaattaaaatgaatattccTCCAGCAGTGCCCACACCAACCATCTCGCTTACATATGGAGTTAAACTCCAGCAGGAACAGCTTAcgttttcaaaaacctgcaatactAGTTCGTACGTCCGCTTCTCCACGTcggtttttataaatatgagcaTTGGTGTGAATTAAAGTGTACGCACACTCTACGAACAAATCTGAGCGTTCGCACATTTTATGAATCTGGCCCCAGAAGGGCAGAATATCTAAATTCAAATATGACGAGTTTCCAAAGTCTAATCATGTCTAAGTGCAACGTTACCTTCAAATAATACCTTCAAGTCAGTATTAAACCTTCAAAGACCTTGGAGTTAAATGGAGTGATGAAGGCAGTTCACTCAACAGCATTTAGGGTAGGTTTAATGTCATTTCACAAGCTTGCTTATTTCATTTGGCCTTGGCTTTACAGACAGGGTTTAGATTTAGTTCCGTTAGGACATTTTAAGCAGATTTTATATGCGTGCCTTAGGAAAAAATACTATTGCGCATCATCAAAACCAAAGCCCTGACATATTTTAAGAACTATCAGTGCTTTGGCTGTCTGTGAAACAGGGATTGatgttttataatgattttaacGACAAAAAAAAGAGCTCTCTGATGTTTGAGGATCTTCTGACATTCATGGCCAGGTGCCCTCCTCTTGGCTTTCCCAAAAAAGCTGAAATGGACTTTTGCGCTCAAAAAGATGGATGCCAAAGACTGCCTTGTGGATCAACTTGCTCACTGGTGCTTTTCCTTCCAAGAGGGGTAGTTGGTTACCAAACCTGCTGTGGTAAAAAGATCAGTTTTGTTCTTTGATCATGCTGCCCTGGTTTTCCaaattctcaaaatattaaactacTCTACACAAAAATAGACATGTTTGTCCAAAGGCTGTAGTCCACATCTAAAATGGACATTAttcacactttaaaatgtatggtTGGTGTACCGTAGTTGGAACACAattgtatttgtgtataaaatatttggACAAAA

Function

GO: NA

KEGG:

id description
ko04136 Autophagy - other

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237328.1 True 2922 mRNA 0.41 6 18923263 18927380

Neighbor

gene id symbol gene type direction distance location
LOC122342975 LOC107571373 coding downstream 70637 18843947 ~ 18852626 (-)
LOC122342979 LOC107694482,LOC107578888 coding downstream 82547 18836618 ~ 18840716 (-)
scgn scgn,LOC107747999,LOC107663245,LOC107693759,LOC107757885 coding downstream 254454 18662858 ~ 18668809 (-)
LOC122342949 NA coding downstream 318953 18594319 ~ 18604310 (-)
LOC122343043 LOC107724037,LOC107685393,LOC107554738 coding downstream 331876 18587663 ~ 18591387 (-)
LOC122342237 NA coding upstream 39881 18967261 ~ 18970537 (-)
LOC122343103 NA coding upstream 87705 19015085 ~ 19017227 (-)
LOC122342247 NA coding upstream 544053 19471433 ~ 19474667 (-)
LOC122342252 LOC107695509,LOC107701922 coding upstream 735518 19662898 ~ 19677320 (-)
LOC122342256 NA coding upstream 825034 19752414 ~ 19754123 (-)
LOC122343202 NA non-coding downstream 62093 18857887 ~ 18861170 (-)
G29753 NA non-coding downstream 65542 18857474 ~ 18857721 (-)
G29741 NA non-coding downstream 116595 18800904 ~ 18806668 (-)
G29738 LOC107710542 non-coding downstream 136571 18786196 ~ 18786692 (-)
G29736 NA non-coding downstream 139348 18783605 ~ 18783915 (-)
LOC122343185 NA non-coding upstream 28838 18956218 ~ 18958048 (-)
G29796 NA non-coding upstream 39396 18966776 ~ 18967064 (-)
G29806 NA non-coding upstream 118437 19045817 ~ 19053531 (-)
LOC122343199 NA non-coding upstream 298594 19225974 ~ 19226499 (-)
LOC122343183 NA non-coding upstream 405542 19332922 ~ 19333726 (-)
LOC122343130 NA other downstream 5730 18916326 ~ 18917533 (-)
LOC122343082 NA other downstream 20711 18898807 ~ 18902552 (-)
LOC122342944 LOC107581743 other downstream 187623 18693002 ~ 18735640 (-)
LOC122343054 NA other downstream 261610 18655244 ~ 18661653 (-)
G29653 LOC107663329,LOC107575399,LOC107749046,LOC107758217,LOC107576964,LOC107665206,LOC107571858,LOC107671223,LOC107576424 other downstream 494920 18408560 ~ 18428343 (-)
G29787 NA other upstream 4156 18931536 ~ 18931875 (-)
LOC122342243 NA other upstream 406349 19333729 ~ 19337492 (-)
LOC122343146 NA other upstream 1073608 20000988 ~ 20009712 (-)
G29902 NA other upstream 1309757 20237137 ~ 20238554 (-)
G29906 NA other upstream 1353726 20281106 ~ 20282400 (-)

Expression


Co-expression Network