ckap4


Basic Information

Item Value
gene id ckap4
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24476996 ~ 24479914 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237349.1
TGTGAAGAAAATCAGTGCCACGTCTGAAGAAGGGCGGGGCGAGCGAggacgcgacgcgacgcgacgcCCTTCATCATCCTTCATCATCCTTCAGCGCGTCGGAGATCAACTTCGCTGACTCTTCCGGGACTCTGAAGAAGTTGTCGAGCGCGCAACGCGTCGCTCCGGGTCCTCCGAGGAGTCAAGGAACGCGAGAACGCGCGGAACGATGGCCGCGAAGAACCGAAACAAGAGCGGCTCGCAGCCGAGCAGCGGCGACAGAGCACCGGCGAGCGCGCAGCCCGACGACGCGCCGAAGAACCGGAGCCCGAGAGCGGTGCGCGCGGACGGCGGCGCGTCGGGCTCGCTCGTGAAGCTCGTGTCCGCGCTGTCCTACCTGGGCTTCGTGGCCGGGACCGTGATCGCGTCCGTGAGCTTCTACCAGGAGCTGTCAAACATCAAACAGACGAGCTCCCGGCACGAGGAGTCCGTCCAGAAGTGCGCGGACGCGGCCGACGCGCTGCAACAGATCCGGTCCATGCAGGCGTCTCTGGAGGCTCTGGAGAGCGCGGTACTCGGCGTCAGGACTGATCTGGAGCGCACTGGCCGAGCCGTGCAGACGGGAGAAGACAACACCCGGCGGCTGGAGGACACGCTCCAGAAGCTCCAGAGCGATGTCTCCCAGGAGCTGAGGCAGGCTGTCCAGGAGGTGAAGGGGACGCGGGAGCAGGATGCCTCGTCCCTGGAGGAGCGCCTGTCCCAGCTGAGCCGCTCCACGGCTGAGGCCTCGGTGCAGCAGAGCCGCTTCCAGAGCGAACTACAGGAGCTCAGGGCCCGTGTGGAGAAGCAGGACGCCCCGGCAGACCTCCGGCAAGAGCTGACGGCCCTCGGCGGCACCGTGGAGCGTCTGAGCACCGCCAGCGAGGTGTCCGAGGGGAACACGGCCGTGCTGCGTGAGCACATCGCAGCAGTCAGCGCCGAGCTGCAGACCAGGAACAAGGAGGTGGCGTCTGTGTCCGAGGACGTGGAGGCTGTGAGGACGCTGCTGCAGAGCGCCGTCGGGAGCCTCCGGGACGAGGTGTCCACGGCCAGAGCCAGTGCTCAGAGCGCCTCCGACCACATCCAGAGCCTCGCCGACCGGCTGGAGATGAGCACCACCGCCCTGCAGAGCCTAGAGACCCAGACCCGAGAACAGCTGAGCCAGCTGGACAAACACAGAGAGGACGCCGAGGTCCGGCTGAAGAGTGTGGAGGAGAGCCAGGAGGCCGCTGTGTCCTCGCTCACGGAGCAGACCAACAGACTGAACGCTCTCGAGGCCGAGCAGCAATCTCTCCGGCGCTCACTGGACGACCACAAGACCAGTGCAGAGAAACAGAGCCGGGCGCTGAGAGACGGTCTGGAGGAGCTGCAGGCCAGAGCTTCTGAGGCCCAGGAGCTAGAGAGAGAACCTGAACGTTTAGATTAGCGGGGTTCAGGAGGGTGGAGGGCTGTGGGTGGTGGAAAGGTCAAAGCTCTTGATCAGAGCACTGAACTGCTGTTTCTTCGGGCGACACGTACCTGCACTGTAGTTTGTAGATGTTGTCCAGGGTTTTTGGTCATTTCAGACACACTTCTGAACTCATCACGATTGTAGTTGTTttccaataaaatgtttaaaactctTCCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237349.1 True 1647 mRNA 0.63 2 24476996 24479914

Neighbor

gene id symbol gene type direction distance location
LOC122342338 NA coding downstream 157884 24312842 ~ 24319112 (-)
LOC122343156 LOC107674852,LOC105007321,LOC107551422,LOC103361099,LOC107732279,LOC107677819,LOC107725800 coding downstream 210389 24265349 ~ 24266607 (-)
LOC122342994 LOC107749047,LOC107685875,LOC107728228,LOC107570416,LOC107671223 coding downstream 256988 24207655 ~ 24220008 (-)
LOC122343128 LOC107728228,LOC107569032,LOC107685875,LOC107705465,LOC107574018 coding downstream 547462 23816849 ~ 23929534 (-)
LOC122343107 LOC107566978,LOC107575457,LOC107561645,LOC107655025 coding downstream 749078 23725752 ~ 23727918 (-)
LOC122343108 LOC107677819,LOC107725800 coding upstream 5448 24485362 ~ 24492499 (-)
LOC122342346 LOC107581033 coding upstream 62224 24542138 ~ 24544170 (-)
LOC122342998 NA coding upstream 78218 24558132 ~ 24564000 (-)
LOC122342983 NA coding upstream 103053 24582967 ~ 24593953 (-)
LOC122343065 NA coding upstream 147150 24627064 ~ 24631306 (-)
G31155 NA non-coding downstream 10440 24465363 ~ 24466556 (-)
G31124 NA non-coding downstream 12102 24453461 ~ 24464894 (-)
G31121 NA non-coding downstream 18737 24457414 ~ 24458259 (-)
LOC122343161 LOC107743936,LOC101883431 non-coding downstream 28706 24445529 ~ 24448290 (-)
G31152 NA non-coding downstream 43595 24424927 ~ 24433401 (-)
G31161 NA non-coding upstream 34042 24513956 ~ 24552855 (-)
G31165 LOC107685875,LOC107671223,LOC107570416,LOC107728228,LOC107749047 non-coding upstream 73504 24553418 ~ 24683082 (-)
G31179 NA non-coding upstream 156347 24636261 ~ 24639737 (-)
G31189 NA non-coding upstream 187724 24667638 ~ 24669294 (-)
G31192 NA non-coding upstream 207614 24687528 ~ 24688132 (-)
LOC122342340 NA other downstream 149733 24323970 ~ 24327263 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other downstream 366323 24110224 ~ 24110673 (-)
G31050 NA other downstream 705228 23745486 ~ 23771768 (-)
G31017 NA other downstream 930627 23478525 ~ 23546369 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other downstream 1039981 23416891 ~ 23437015 (-)
LOC122342407 LOC101068103,LOC105418166,LOC106522608,LOC108412963,LOC105419408,LOC108431938,LOC107395447,LOC106674638 other upstream 274142 24754056 ~ 24760786 (-)
G31314 NA other upstream 1079126 25559040 ~ 25561198 (-)
G31394 NA other upstream 1693785 26173699 ~ 26175249 (-)
G31400 LOC102197881 other upstream 1844565 26324479 ~ 26325236 (-)
G31463 LOC107665166,LOC107752513,LOC107549841 other upstream 2886498 27366412 ~ 27367649 (-)

Expression


Co-expression Network