LOC122343048 (LOC107698963)


Basic Information

Item Value
gene id LOC122343048
gene name LOC107698963
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18918600 ~ 18922510 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237353.1
TTGtggtttaaacatttatttgaaggaAATGTACTCTAGCTAGTTAACTTTTCAGGGCCGTTTCAGGCATATTCGGGATGTATTTTAGcatgtaatatttagtttgtaaCGGTATCTGTTCTGTGTCTCGGAGCGTTGGGTTTCGTGGTAGGACAGTTTTCTGGGAATACAGTAAACACATTGTCACTGAATCACATGAGAGATGAGATCGTTCTTCTGGAAGGTTCCCACAGAGACCACCTCGGCGAAGGCtgtgaagattttttttaatcaggcaGACATCTTTCGTTGTCCTCATGGGGTGTTGTTTGTAGGATAGACCGAACAGACTGAATCAAGCGTGTTCATATCTTTTCAATCCCAAACCGATGTGTCAGTGTGGACTTCGGGGGTCTACGGATCTCGCCGGATCTCTCCGAGGCTGAGCTTGAATGCAAAGATGATATTGGGAAAATGTTGAAAGAATGGGGAGGCTCGATTCATGCGTTTTCCACCAAGAAAGTGGGTTTTCTGTGGCGTTGGTCTCTGTCAGCTGGCATATGTAGATGTTCTCTCCCAGCTTCACATTTATCTTTTTGCTTCCCAGACACACTCGTTGATAGGAGGCTACCTGAGTCAAAGTGTCCAGATACTCCAGCTGAAACAAAAAGATCGATGCGACACGCTATTATAAAGATGGCGTTCATTAAAGAGGAGAGCAAAGACATGAGGATTGAAGAAGCGTTCACAGTAAAGCAAGAAGATAAtgaggaacaaacagatgCGACGGCGTTGAAAGAGGAGAGTCGAGATCCGAATGAAACGGTAGAGGAAGATCTGCATGAAAAACACGATTTCATATCTTTTGAAAAGGATCCAAAGACTGGAGCTCTGAGTCGTTTCATTTGCCAACATTGcggaaagattttaaaaaacagagaaaacctTAAAATCCATACCAGGATTCACACTGGGGAGAAGCCTTTTATCTGCCAagagtgcgggaagagcttcccGCGAAAAGATAATCTGAGAATTCACGTGAGGGTTCACACCGGGGAGAAACCTTACACCTGCCagcagtgtggaaagagtttcccGCGAAAAGATAACCTCAAGAttcacatgagaattcacaccggagagaaaccgttcaTATGTGGTCAATGCGGAAAGCGTTTCCCGCACAAAGCGACCTTTTACACCCACGTgagaattcacaccggagagaagccttacaccTGCCAACTGTGCGGGAAAACGGTGAACCGAAAAGGAAATCTTAAGGCTCATatgagagttcacaccggagagaagcctttcgcTTGTGAACGGTGTGGGAGACGTTTCGTACGCAAGGAAGGCCTCGGCAAGCACTTGGAGACGCACTCGAGTGAGAGCTCTTTTACGTGCCAGAGGTGCGGAAGGGCATTCACAGACGGCGGCCGCTTTAAGAGCCACGTACTCGCTCACATGGGGCAGGAGCCTTTCATGTGTCTTCACTGCGGGAAGACTCTCGCGAAAAAAGCAAACCTCAAGACTCACATGagaatccacaccggagagaagcctttcgcgtgtgatcagtgcgggaagagtttcagaCAGAAAACCACTCTTTATACtcacatgagagttcacaccgCAGAGAGGCCTGTTCGAATATGTATAGTGTGAGTTTCCCACGTCAGATCTGACGAGTTATTTGGGAAATCACTCTGGGAAAGGAGCACCCGTGCGCTCGGGAGAAAGTACGATGCTTGTAGGCTTTGGATTCGTATCCTGGCAaggatttctgtatttctttgGTTCAGAGTACCTCGAGATCGTCACGAACCCAAACGAAGCCATAACCTAGACATTTTAAGCAATGTAGAAACCCTGGCCAGGACACATCCGTGAAAAATGGCACGTATCTTATAGTCTTCGAAAAGGCCGTAACAGCATTATATTCTCTTTTAACAAGAAATCCGTAAAAGTCCTAAATATTCGAAATTATAAAGTCTTAACCTTTGGCAAAGGTTTTAAACATTTGGCGCACAAACAGAGGAGATGCTTGGAAAAAGCAAACCTGTTTTCGATTGCCATCGAAACTGATTTTCAAGGAGCTGTCGTAGtcttgtaatatataattttttcaaggGTGTTTAAACGCAATAGGCTTTTCTATTTTCGTTTACCGTTTTTATATAGGCCATTCTACAGAACTGGTCCGAAGTCATTGGAAAcatcttggaaaaaaaatagtattttctaaattatttgtatgtatgcaaGTCGAGCGATTTCCAAGGTACAAATTTGTAGTAATTGTGCAGTAAGTTCTCATATTGTATTTTCAGAAAGTTTTGGAATACGTCATTATGTGAAACgcagtaataatttaattatttaataaaaaaacaattacattttaaacaatatttcaaGTATAATTTGTGAGATTTCAATTGcagatttttcatattttgaacgCTTTTACCTCAAAACGATGAGACCGCATATTGTAGCTATGAGAGATATATGATCGTAAATatatgggtgtttttttttcagataaaactTCCCAGTGTTATGGAAATTgcaatgatatttattttaataactatcACTATCAGAGGTGGACTTAACCTTAGCTAGGTGACCATCTTGGGCCCGCACAAAATGTCCGCACAAcacttttcagaaataaaagatGTGCATTAACCATGGAGACGGTTGCTGTGTTGCCAGGACAACCACTGGCATGGCTGCAGTAAATGTACTTCTTTTGTCTTCAGCTTGtagcaaatgaaaacaatggatctaaagtgtaattaaacattaagcAACATTA
>XM_043237354.1
TTGtggtttaaacatttatttgaaggaAATGTACTCTAGCTAGTTAACTTTTCAGGGCCGTTTCAGGCATATTCGGGATGTATTTTAGcatgtaatatttagtttgtaaCGGTATCTGTTCTGTGTCTCGGAGCGTTGGGTTTCGTGGTAGGACAGTTTTCTGGGAATACAGTAAACACATTGTCACTGAATCACATGAGAGATGAGATCGTTCTTCTGGAAGGTTCCCACAGAGACCACCTCGGCGAAGGCtgtgaagattttttttaatcaggcaGACATCTTTCGTTGTCCTCATGGGGTGTTGTTTGTAGGATAGACCGAACAGACTGAATCAAGCGTGTTCATATCTTTTCAATCCCAAACCGATGTGTCAGTGTGGACTTCGGGGGTCTACGGATCTCGCCGGATCTCTCCGAGGCTGAGCTTGAATGCAAAGATGATATTGGGAAAATGTTGAAAGAATGGGGAGGCTCGATTCATGCGTTTTCCACCAAGAAAACACACTCGTTGATAGGAGGCTACCTGAGTCAAAGTGTCCAGATACTCCAGCTGAAACAAAAAGATCGATGCGACACGCTATTATAAAGATGGCGTTCATTAAAGAGGAGAGCAAAGACATGAGGATTGAAGAAGCGTTCACAGTAAAGCAAGAAGATAAtgaggaacaaacagatgCGACGGCGTTGAAAGAGGAGAGTCGAGATCCGAATGAAACGGTAGAGGAAGATCTGCATGAAAAACACGATTTCATATCTTTTGAAAAGGATCCAAAGACTGGAGCTCTGAGTCGTTTCATTTGCCAACATTGcggaaagattttaaaaaacagagaaaacctTAAAATCCATACCAGGATTCACACTGGGGAGAAGCCTTTTATCTGCCAagagtgcgggaagagcttcccGCGAAAAGATAATCTGAGAATTCACGTGAGGGTTCACACCGGGGAGAAACCTTACACCTGCCagcagtgtggaaagagtttcccGCGAAAAGATAACCTCAAGAttcacatgagaattcacaccggagagaaaccgttcaTATGTGGTCAATGCGGAAAGCGTTTCCCGCACAAAGCGACCTTTTACACCCACGTgagaattcacaccggagagaagccttacaccTGCCAACTGTGCGGGAAAACGGTGAACCGAAAAGGAAATCTTAAGGCTCATatgagagttcacaccggagagaagcctttcgcTTGTGAACGGTGTGGGAGACGTTTCGTACGCAAGGAAGGCCTCGGCAAGCACTTGGAGACGCACTCGAGTGAGAGCTCTTTTACGTGCCAGAGGTGCGGAAGGGCATTCACAGACGGCGGCCGCTTTAAGAGCCACGTACTCGCTCACATGGGGCAGGAGCCTTTCATGTGTCTTCACTGCGGGAAGACTCTCGCGAAAAAAGCAAACCTCAAGACTCACATGagaatccacaccggagagaagcctttcgcgtgtgatcagtgcgggaagagtttcagaCAGAAAACCACTCTTTATACtcacatgagagttcacaccgCAGAGAGGCCTGTTCGAATATGTATAGTGTGAGTTTCCCACGTCAGATCTGACGAGTTATTTGGGAAATCACTCTGGGAAAGGAGCACCCGTGCGCTCGGGAGAAAGTACGATGCTTGTAGGCTTTGGATTCGTATCCTGGCAaggatttctgtatttctttgGTTCAGAGTACCTCGAGATCGTCACGAACCCAAACGAAGCCATAACCTAGACATTTTAAGCAATGTAGAAACCCTGGCCAGGACACATCCGTGAAAAATGGCACGTATCTTATAGTCTTCGAAAAGGCCGTAACAGCATTATATTCTCTTTTAACAAGAAATCCGTAAAAGTCCTAAATATTCGAAATTATAAAGTCTTAACCTTTGGCAAAGGTTTTAAACATTTGGCGCACAAACAGAGGAGATGCTTGGAAAAAGCAAACCTGTTTTCGATTGCCATCGAAACTGATTTTCAAGGAGCTGTCGTAGtcttgtaatatataattttttcaaggGTGTTTAAACGCAATAGGCTTTTCTATTTTCGTTTACCGTTTTTATATAGGCCATTCTACAGAACTGGTCCGAAGTCATTGGAAAcatcttggaaaaaaaatagtattttctaaattatttgtatgtatgcaaGTCGAGCGATTTCCAAGGTACAAATTTGTAGTAATTGTGCAGTAAGTTCTCATATTGTATTTTCAGAAAGTTTTGGAATACGTCATTATGTGAAACgcagtaataatttaattatttaataaaaaaacaattacattttaaacaatatttcaaGTATAATTTGTGAGATTTCAATTGcagatttttcatattttgaacgCTTTTACCTCAAAACGATGAGACCGCATATTGTAGCTATGAGAGATATATGATCGTAAATatatgggtgtttttttttcagataaaactTCCCAGTGTTATGGAAATTgcaatgatatttattttaataactatcACTATCAGAGGTGGACTTAACCTTAGCTAGGTGACCATCTTGGGCCCGCACAAAATGTCCGCACAAcacttttcagaaataaaagatGTGCATTAACCATGGAGACGGTTGCTGTGTTGCCAGGACAACCACTGGCATGGCTGCAGTAAATGTACTTCTTTTGTCTTCAGCTTGtagcaaatgaaaacaatggatctaaagtgtaattaaacattaagcAACATTA
>XM_043237355.1
GACGCGTCGCGCTACCGCACCTGCGCTTTAAAAAGACACACTCGTTGATAGGAGGCTACCTGAGTCAAAGTGTCCAGATACTCCAGCTGAAACAAAAAGATCGATGCGACACGCTATTATAAAGATGGCGTTCATTAAAGAGGAGAGCAAAGACATGAGGATTGAAGAAGCGTTCACAGTAAAGCAAGAAGATAAtgaggaacaaacagatgCGACGGCGTTGAAAGAGGAGAGTCGAGATCCGAATGAAACGGTAGAGGAAGATCTGCATGAAAAACACGATTTCATATCTTTTGAAAAGGATCCAAAGACTGGAGCTCTGAGTCGTTTCATTTGCCAACATTGcggaaagattttaaaaaacagagaaaacctTAAAATCCATACCAGGATTCACACTGGGGAGAAGCCTTTTATCTGCCAagagtgcgggaagagcttcccGCGAAAAGATAATCTGAGAATTCACGTGAGGGTTCACACCGGGGAGAAACCTTACACCTGCCagcagtgtggaaagagtttcccGCGAAAAGATAACCTCAAGAttcacatgagaattcacaccggagagaaaccgttcaTATGTGGTCAATGCGGAAAGCGTTTCCCGCACAAAGCGACCTTTTACACCCACGTgagaattcacaccggagagaagccttacaccTGCCAACTGTGCGGGAAAACGGTGAACCGAAAAGGAAATCTTAAGGCTCATatgagagttcacaccggagagaagcctttcgcTTGTGAACGGTGTGGGAGACGTTTCGTACGCAAGGAAGGCCTCGGCAAGCACTTGGAGACGCACTCGAGTGAGAGCTCTTTTACGTGCCAGAGGTGCGGAAGGGCATTCACAGACGGCGGCCGCTTTAAGAGCCACGTACTCGCTCACATGGGGCAGGAGCCTTTCATGTGTCTTCACTGCGGGAAGACTCTCGCGAAAAAAGCAAACCTCAAGACTCACATGagaatccacaccggagagaagcctttcgcgtgtgatcagtgcgggaagagtttcagaCAGAAAACCACTCTTTATACtcacatgagagttcacaccgCAGAGAGGCCTGTTCGAATATGTATAGTGTGAGTTTCCCACGTCAGATCTGACGAGTTATTTGGGAAATCACTCTGGGAAAGGAGCACCCGTGCGCTCGGGAGAAAGTACGATGCTTGTAGGCTTTGGATTCGTATCCTGGCAaggatttctgtatttctttgGTTCAGAGTACCTCGAGATCGTCACGAACCCAAACGAAGCCATAACCTAGACATTTTAAGCAATGTAGAAACCCTGGCCAGGACACATCCGTGAAAAATGGCACGTATCTTATAGTCTTCGAAAAGGCCGTAACAGCATTATATTCTCTTTTAACAAGAAATCCGTAAAAGTCCTAAATATTCGAAATTATAAAGTCTTAACCTTTGGCAAAGGTTTTAAACATTTGGCGCACAAACAGAGGAGATGCTTGGAAAAAGCAAACCTGTTTTCGATTGCCATCGAAACTGATTTTCAAGGAGCTGTCGTAGtcttgtaatatataattttttcaaggGTGTTTAAACGCAATAGGCTTTTCTATTTTCGTTTACCGTTTTTATATAGGCCATTCTACAGAACTGGTCCGAAGTCATTGGAAAcatcttggaaaaaaaatagtattttctaaattatttgtatgtatgcaaGTCGAGCGATTTCCAAGGTACAAATTTGTAGTAATTGTGCAGTAAGTTCTCATATTGTATTTTCAGAAAGTTTTGGAATACGTCATTATGTGAAACgcagtaataatttaattatttaataaaaaaacaattacattttaaacaatatttcaaGTATAATTTGTGAGATTTCAATTGcagatttttcatattttgaacgCTTTTACCTCAAAACGATGAGACCGCATATTGTAGCTATGAGAGATATATGATCGTAAATatatgggtgtttttttttcagataaaactTCCCAGTGTTATGGAAATTgcaatgatatttattttaataactatcACTATCAGAGGTGGACTTAACCTTAGCTAGGTGACCATCTTGGGCCCGCACAAAATGTCCGCACAAcacttttcagaaataaaagatGTGCATTAACCATGGAGACGGTTGCTGTGTTGCCAGGACAACCACTGGCATGGCTGCAGTAAATGTACTTCTTTTGTCTTCAGCTTGtagcaaatgaaaacaatggatctaaagtgtaattaaacattaagcAACATTA

Function

NR:

description
PREDICTED: gastrula zinc finger protein XlCGF8.2DB-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237353.1 True 2815 mRNA 0.42 2 18918644 18922510
XM_043237354.1 False 2730 mRNA 0.42 3 18918644 18922510
XM_043237355.1 False 2264 mRNA 0.42 3 18918600 18922510

Neighbor

gene id symbol gene type direction distance location
LOC122342974 NA coding upstream 3578 18908916 ~ 18915022 (+)
LOC122343078 LOC107730199 coding upstream 20810 18894901 ~ 18897790 (+)
LOC122343055 LOC107554755,LOC107730198,LOC107663244 coding upstream 48817 18865853 ~ 18869783 (+)
LOC122342961 NA coding upstream 86007 18823925 ~ 18832593 (+)
LOC122343011 NA coding upstream 104006 18810860 ~ 18814594 (+)
LOC122343092 NA coding downstream 11197 18933707 ~ 18937665 (+)
LOC122343037 LOC107698808,LOC107743352 coding downstream 28217 18950727 ~ 18953599 (+)
LOC122342236 NA coding downstream 38152 18960662 ~ 18962974 (+)
LOC122342238 NA coding downstream 141515 19064025 ~ 19067883 (+)
LOC122342239 NA coding downstream 224491 19147001 ~ 19150635 (+)
LOC122343164 NA non-coding upstream 10776 18903235 ~ 18907824 (+)
G29633 NA non-coding upstream 103322 18814883 ~ 18815278 (+)
G29627 NA non-coding upstream 133354 18785045 ~ 18785246 (+)
G29600 NA non-coding upstream 253517 18662860 ~ 18665083 (+)
G29591 NA non-coding upstream 315284 18600428 ~ 18603316 (+)
G29777 NA non-coding downstream 9809 18932319 ~ 18932690 (+)
G29797 NA non-coding downstream 44877 18967387 ~ 18967714 (+)
G29803 NA non-coding downstream 123200 19045710 ~ 19053414 (+)
G29809 NA non-coding downstream 157258 19079768 ~ 19080189 (+)
LOC122343175 NA non-coding downstream 447261 19369771 ~ 19371889 (+)
G29642 NA other upstream 32198 18883179 ~ 18886402 (+)
G29545 NA other upstream 457283 18436460 ~ 18461317 (+)
G29526 NA other upstream 617411 18300415 ~ 18301189 (+)
atp5mj NA other upstream 1877770 17038419 ~ 17040830 (+)
G28982 NA other upstream 2444219 16473898 ~ 16474381 (+)
G29814 LOC107660256 other downstream 367710 19290220 ~ 19342911 (+)
G29835 NA other downstream 808752 19731262 ~ 19786128 (+)
LOC122343071 NA other downstream 823224 19745734 ~ 19750074 (+)
LOC122343063 NA other downstream 1115423 20037933 ~ 20043453 (+)
LOC122342270 NA other downstream 1421836 20344346 ~ 20346724 (+)

Expression


Co-expression Network