LOC122343058


Basic Information

Item Value
gene id LOC122343058
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 19981179 ~ 19990088 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237363.1
TAAGTTTGTAAATCAACGCCAAGTCTTTTGTCAGCGGGAGGGTTTTCAGAAGTTGCTGTAATACTTGagttaaattcaaatataacgTTATTTTCGCGAGTAAAGCGCGTCCTCGTATTAATAACAGAAAAGGACAAAGTTTCCAAACACCTAGAAAAACTGCCGAAGCGACCGACGTCCATGTGACGCAATAATAAAGATGCCGTTTATTAAAAAGGAGAGTGAAGACGTGAAGGTCGAAGAAACGTCCAACCGTGAAGATACAGAGGAGCGCGCGAAGACGGCGTTCTTCAAAGAGGAATGCGAAAACGTGAAGATAGAAGATGCATTCAGAGTCAAACAAGAAGATGAGGAGCAAATAGACCTAATGGCACCTAAAGAGGAGAGGGACGTGTTGAATGAAATTGAGGAGAACGATCAGAACGGGAATCTTCATGATTTCATCAGTGGAGAAAAATCACTTCGTTCCTTACAGTCCGAAAAGACTGCCACGCGAAAAAGAGCCCAAAAGAAAGGTGCTGGGAATTATTTCACTTGCTTTCAGTGTGGAAAGGCTTTCAATCAGCAAGGAAAGCTTAACAGGCACATGAAAATTCACAACAGCTCTCCTCAGTCTGGAACGAGTTCCAATCGAAATGGAAACCTTGACGTCCAAAGCCCTTTTACCTGTAAACAGTGTGGAAACACTTTCACGTACAAAGGAAGCCTTACCAAgcacatgagagttcacactggagaaAAGCCTTACACCTGCAAACAGTGTGGAAAGGGGTTCAGTTTTCACGGAAACCTGAAAGtccacatgagagttcacaccggagagaagcccttcaTCTGCCAGtggtgtggaaagagtttcagtcaGCACGTGAATCTGGAATCTCACATGagaatccacaccggagagaagcctttcgGCTGCAAacagtgcggaaagagtttcagtCAAAATGGAAACCTCATTCACCATCTGagaatccacaccggagagagaccTTTCACCTGCAAACAGTGCGGAAAAGGTTTCAGTCAACTCGGAACCCTCAATTACCATAAGAGAGTCCACTCTAGAAAGAAACCCCTCGCCTGTCTCAATGCCCACAGGCGAGTACACGCTACGGAGAAACTTTTTACCTGCCAACTGTGTGGAAACAATTTTACTCATAAAGGAAGTCTCAACAGGCACATGAAAATCCACATTAAGGAGAAGCCTTGCGCGTGCTCTcggtgtggaaagagtttcggTCAAAAACGATACCTTGACGttcacatgagaattcacactaAAGAGAAGTTTCTGCTGAAAAGacacacccacacatacacacctgaGTTCTGAGAAAGAGAAACTTAAGTGTAGCTGTGCGGGAAACAGAAGTCATCATGGAAAGAGAAACTCTCTCTGGATGATTTATAAACACGTACCCACAATACTGCATCAGCAGCAATACAGAGGACCGAGAAAAAGTTCTATTCAGCAACATGGATCCCAGAACCAGAAACAACTTCCTGCAGTATTCCAGTCCTCTCACCCTGGACCTGAACACAGTGAACAAACACCTCTGTCTGTCTGACAGGAACCGAGAGATTTTTGGTACTCTCACAGAGCAGCCGTAtactgatcatccagacagatttgatggaTATAATCTTCAGGTGTTGTGTCGAGAGAGTGTGTGCGGACGCAGTTACTGGGAGATTGAGTGGAGCGGGATGTTTGGTGTGGACATATCGGTGTCGTATAAGAGCATCGGCAGGAAGACAGGTGGCGACGAGTGCCTGTTTGGAcgtaatgatcagtcctggagtttgttaTGCTCTCCTGACAGATGCTCATTTGTTCATAATAACAAACGGACTGAACTGCCTGTAGCGTCCAGCCGTAAAGTAGGAGTGTACgtggatgagagcgcaggaactctgtccttctacagcatCTCGGACacaatgagactcatccacacagtccagacaaCATTCACTCAGAGCCTCTATCCTGggttttatgcatttgttggatcatcagtgaaactgtcTTGATGAATCGTTTTAGCCATTTCTATGTAATTTCTTTGCACATGCTCTCTTTTGCACCGGAAGCTCCTGACAGCTCAACGTATCACAATGAAGATTTAAATCGGGATCACAGAACACTTTCATGCGGTAATGCCTCAACCTCCTCGCACTTAACCGAATCACTGAAGGACACCTGGTCCCATGCCTGAACCAACAAATCAGACCGTTCAGCTAATCCTTCCTTATCATAGTCTTGCTTGGTAAAAAGAATAACAAcaatcattaatttaaataaaataaaagtccaaCATAAAACGTAATAAGCATAAACGTAATTCATCTCTGAAGTCTTTAAGTGAGTGGTAGCGCTAAAAGTTACATGTTAATGAACTCGAACAACTTTTGCTATTTAACtgttcagagtgtgtgtgtgtgtgggtggatcctgaaaatgaataattaaaaacccAATAACTACCAGTAGGTGGTAGCCTAAGACCACAAAGCTTTAGCAGGCTATTCGTGTTGATGGTTTGTATTTGGTCGGTGATACGTTAGATCTTGATGGTTGAGATCAGTAGGTGGTAGGCTAGATGTTTGAGGGGTTGATGTGGGTGGAGGGATGGATGTAGATGGTGTGGTTCGCAAAAATTCTTAAACGAAAGAATGTATGGCATGAAACTGACGCTTATTGGTTTACACCTTTTTCATCACAGATTGCAATATGCTTTGTTTCTGGTGAGGTGTGTTTGAATGAGCAATGTGTAGCTTCACGGAGTGGCAAGGACAGTACacgataaaaaaacaaataaatgtaaaaaatcttaaaaaatcttaaaaaaaaaaactaaatgcagcAGGGGCGCCAGAAAATGGcttgaaacaaaaaacaaacaaaaaaactaatttcttgTTCCATAATTACAGGTTATTACTGTaagtataattttaatatacataaaatcttttttacttttgacaaCAATTTTCAGAATACATTAATACACCTTTGAAATAAAACGATTGTCTTTTAtagaatgattaaaaaaaaagcttaggTACAGATAATTActgttgttattataaaaaaaacagtaaatctAAGTGTCGATACAAATTATGATATTGTTTGTATACattaactgtaaaattactTTACTGTAAACTTTATTCTAGGCTTCATTTTCACTGATAATAAACTCAACTCAACTTTGTTAT
>XM_043237364.1
ggtcttGTGGTGTGACGCCATAAAGGCGCGCCGCGCGTCTGCGTCTGTTTCTGATTCGCCCGAAGAAAGGACAAAGTTTCCAAACACCTAGAAAAACTGCCGAAGCGACCGACGTCCATGTGACGCAATAATAAAGATGCCGTTTATTAAAAAGGAGAGTGAAGACGTGAAGGTCGAAGAAACGTCCAACCGTGAAGATACAGAGGAGCGCGCGAAGACGGCGTTCTTCAAAGAGGAATGCGAAAACGTGAAGATAGAAGATGCATTCAGAGTCAAACAAGAAGATGAGGAGCAAATAGACCTAATGGCACCTAAAGAGGAGAGGGACGTGTTGAATGAAATTGAGGAGAACGATCAGAACGGGAATCTTCATGATTTCATCAGTGGAGAAAAATCACTTCGTTCCTTACAGTCCGAAAAGACTGCCACGCGAAAAAGAGCCCAAAAGAAAGGTGCTGGGAATTATTTCACTTGCTTTCAGTGTGGAAAGGCTTTCAATCAGCAAGGAAAGCTTAACAGGCACATGAAAATTCACAACAGCTCTCCTCAGTCTGGAACGAGTTCCAATCGAAATGGAAACCTTGACGTCCAAAGCCCTTTTACCTGTAAACAGTGTGGAAACACTTTCACGTACAAAGGAAGCCTTACCAAgcacatgagagttcacactggagaaAAGCCTTACACCTGCAAACAGTGTGGAAAGGGGTTCAGTTTTCACGGAAACCTGAAAGtccacatgagagttcacaccggagagaagcccttcaTCTGCCAGtggtgtggaaagagtttcagtcaGCACGTGAATCTGGAATCTCACATGagaatccacaccggagagaagcctttcgGCTGCAAacagtgcggaaagagtttcagtCAAAATGGAAACCTCATTCACCATCTGagaatccacaccggagagagaccTTTCACCTGCAAACAGTGCGGAAAAGGTTTCAGTCAACTCGGAACCCTCAATTACCATAAGAGAGTCCACTCTAGAAAGAAACCCCTCGCCTGTCTCAATGCCCACAGGCGAGTACACGCTACGGAGAAACTTTTTACCTGCCAACTGTGTGGAAACAATTTTACTCATAAAGGAAGTCTCAACAGGCACATGAAAATCCACATTAAGGAGAAGCCTTGCGCGTGCTCTcggtgtggaaagagtttcggTCAAAAACGATACCTTGACGttcacatgagaattcacactaAAGAGAAGTTTCTGCTGAAAAGacacacccacacatacacacctgaGTTCTGAGAAAGAGAAACTTAAGTGTAGCTGTGCGGGAAACAGAAGTCATCATGGAAAGAGAAACTCTCTCTGGATGATTTATAAACACGTACCCACAATACTGCATCAGCAGCAATACAGAGGACCGAGAAAAAGTTCTATTCAGCAACATGGATCCCAGAACCAGAAACAACTTCCTGCAGTATTCCAGTCCTCTCACCCTGGACCTGAACACAGTGAACAAACACCTCTGTCTGTCTGACAGGAACCGAGAGATTTTTGGTACTCTCACAGAGCAGCCGTAtactgatcatccagacagatttgatggaTATAATCTTCAGGTGTTGTGTCGAGAGAGTGTGTGCGGACGCAGTTACTGGGAGATTGAGTGGAGCGGGATGTTTGGTGTGGACATATCGGTGTCGTATAAGAGCATCGGCAGGAAGACAGGTGGCGACGAGTGCCTGTTTGGAcgtaatgatcagtcctggagtttgttaTGCTCTCCTGACAGATGCTCATTTGTTCATAATAACAAACGGACTGAACTGCCTGTAGCGTCCAGCCGTAAAGTAGGAGTGTACgtggatgagagcgcaggaactctgtccttctacagcatCTCGGACacaatgagactcatccacacagtccagacaaCATTCACTCAGAGCCTCTATCCTGggttttatgcatttgttggatcatcagtgaaactgtcTTGATGAATCGTTTTAGCCATTTCTATGTAATTTCTTTGCACATGCTCTCTTTTGCACCGGAAGCTCCTGACAGCTCAACGTATCACAATGAAGATTTAAATCGGGATCACAGAACACTTTCATGCGGTAATGCCTCAACCTCCTCGCACTTAACCGAATCACTGAAGGACACCTGGTCCCATGCCTGAACCAACAAATCAGACCGTTCAGCTAATCCTTCCTTATCATAGTCTTGCTTGGTAAAAAGAATAACAAcaatcattaatttaaataaaataaaagtccaaCATAAAACGTAATAAGCATAAACGTAATTCATCTCTGAAGTCTTTAAGTGAGTGGTAGCGCTAAAAGTTACATGTTAATGAACTCGAACAACTTTTGCTATTTAACtgttcagagtgtgtgtgtgtgtgggtggatcctgaaaatgaataattaaaaacccAATAACTACCAGTAGGTGGTAGCCTAAGACCACAAAGCTTTAGCAGGCTATTCGTGTTGATGGTTTGTATTTGGTCGGTGATACGTTAGATCTTGATGGTTGAGATCAGTAGGTGGTAGGCTAGATGTTTGAGGGGTTGATGTGGGTGGAGGGATGGATGTAGATGGTGTGGTTCGCAAAAATTCTTAAACGAAAGAATGTATGGCATGAAACTGACGCTTATTGGTTTACACCTTTTTCATCACAGATTGCAATATGCTTTGTTTCTGGTGAGGTGTGTTTGAATGAGCAATGTGTAGCTTCACGGAGTGGCAAGGACAGTACacgataaaaaaacaaataaatgtaaaaaatcttaaaaaatcttaaaaaaaaaaactaaatgcagcAGGGGCGCCAGAAAATGGcttgaaacaaaaaacaaacaaaaaaactaatttcttgTTCCATAATTACAGGTTATTACTGTaagtataattttaatatacataaaatcttttttacttttgacaaCAATTTTCAGAATACATTAATACACCTTTGAAATAAAACGATTGTCTTTTAtagaatgattaaaaaaaaagcttaggTACAGATAATTActgttgttattataaaaaaaacagtaaatctAAGTGTCGATACAAATTATGATATTGTTTGTATACattaactgtaaaattactTTACTGTAAACTTTATTCTAGGCTTCATTTTCACTGATAATAAACTCAACTCAACTTTGTTAT
>XM_043237365.1
TAAGTTTGTAAATCAACGCCAAGTCTTTTGTCAGCGGGAGGGTTTTCAGAAGTTGCTGTAATACTTGagttaaattcaaatataacgTTATTTTCGCGAGTAAAGCGCGTCCTCGTATTAATAACAGAAAAGGACAAAGTTTCCAAACACCTAGAAAAACTGCCGAAGCGACCGACGTCCATGTGACGCAATAATAAAGATGCCGTTTATTAAAAAGGAGAGTGAAGACGTGAAGGTCGAAGAAACGTCCAACCGTGAAGATACAGAGGAGCGCGCGAAGACGGCGTTCTTCAAAGAGGAATGCGAAAACGTGAAGATAGAAGATGCATTCAGAGTCAAACAAGAAGATGAGGAGCAAATAGACCTAATGGCACCTAAAGAGGAGAGGGACGTGTTGAATGAAATTGAGGAGAACGATCAGAACGGGAATCTTCATGATTTCATCAGTGGAGAAAAATCACTTCGTTCCTTACAGTCCGAAAAGACTGCCACGCGAAAAAGAGCCCAAAAGAAAGGTGCTGGGAATTATTTCACTTGCTTTCAGTGTGGAAAGGCTTTCAATCAGCAAGGAAAGCTTAACAGGCACATGAAAATTCACAACAGCTCTCCTCAGTCTGGAACGAGTTCCAATCGAAATGGAAACCTTGACGTCCAAAGCCCTTTTACCTGTAAACAGTGTGGAAACACTTTCACGTACAAAGGAAGCCTTACCAAgcacatgagagttcacactggagaaAAGCCTTACACCTGCAAACAGTGTGGAAAGGGGTTCAGTTTTCACGGAAACCTGAAAGtccacatgagagttcacaccggagagaagcccttcaTCTGCCAGtggtgtggaaagagtttcagtcaGCACGTGAATCTGGAATCTCACATGagaatccacaccggagagaagcctttcgGCTGCAAacagtgcggaaagagtttcagtCAAAATGGAAACCTCATTCACCATCTGagaatccacaccggagagagaccTTTCACCTGCAAACAGTGCGGAAAAGGTTTCAGTCAACTCGGAACCCTCAATTACCATAAGAGAGTCCACTCTAGAAAGAAACCCCTCGCCTGTCTCAATGCCCACAGGCGAGTACACGCTACGGAGAAACTTTTTACCTGCCAACTGTGTGGAAACAATTTTACTCATAAAGGAAGTCTCAACAGGCACATGAAAATCCACATTAAGGAGAAGCCTTGCGCGTGCTCTcggtgtggaaagagtttcggTCAAAAACGATACCTTGACGttcacatgagaattcacactaAAGAGAAGTTTCTGCTGAAAAGGTAACCTTGGGCACCTCATGGAGATGTTACGTGTTTTACATACAAGAACATCCAAGGAGTCTTCCCGGGAAAGCCTGTCATGTACCATCACTGTAGAGTAACACTCTCGCAAATTGTCACATAATGGGGATAGAAAAGGACTCTTTTCTAATTTACAgacaaacatttctaaaaaggAACGCTCGTATCTTGAGGTCGGTGTTGTTCTTGTATGTTGTATACTGTCAGACACGCGTTACGATAGAACCACTAGTTAACGTAACCTCACCTGTATCGTGTTTGGTGTCTATGAATTCTGTCAATGATCtaaatgcaagaaaataaactttctttaaagttttatgaGACCTCTTCATCGTCACACACGGTGCTCCAGATTTTTCTCCTTGGTAAGAGACTCTGGACATCTCATATTTGTCTcctttaggaaaaaaaataaacaacatcacACACCGTGCTTCGATTACTTACCTTAGCTACAGACGCCGGACCTCTCAAGATGAAAATGCTCTCATTAATTACtgaccctcatgtcatttcaaactcgCATAGACTCGTCGCtcctcagaacacaaattaagatattttatgcCATGTGAAATGTTGAGGGAAAAGCGGGTTTCACTTTCAATTCACGGCTGATGAAATTATGGTGGCTATCTGATACTACTGGTTAAAGacacacccacacatacacacctgaGTTCTGAGAAAGAGAAACTTAAGTGTAGCTGTGCGGGAAACAGAAGTCATCATGGAAAGAGAAACTCTCTCTGGATGATTTATAAACACGTACCCACAATACTGCATCAGCAGCAATACAGAGGACCGAGAAAAAGTTCTATTCAGCAACATGGATCCCAGAACCAGAAACAACTTCCTGCAGTATTCCAGTCCTCTCACCCTGGACCTGAACACAGTGAACAAACACCTCTGTCTGTCTGACAGGAACCGAGAGATTTTTGGTACTCTCACAGAGCAGCCGTAtactgatcatccagacagatttgatggaTATAATCTTCAGGTGTTGTGTCGAGAGAGTGTGTGCGGACGCAGTTACTGGGAGATTGAGTGGAGCGGGATGTTTGGTGTGGACATATCGGTGTCGTATAAGAGCATCGGCAGGAAGACAGGTGGCGACGAGTGCCTGTTTGGAcgtaatgatcagtcctggagtttgttaTGCTCTCCTGACAGATGCTCATTTGTTCATAATAACAAACGGACTGAACTGCCTGTAGCGTCCAGCCGTAAAGTAGGAGTGTACgtggatgagagcgcaggaactctgtccttctacagcatCTCGGACacaatgagactcatccacacagtccagacaaCATTCACTCAGAGCCTCTATCCTGggttttatgcatttgttggatcatcagtgaaactgtcTTGATGAATCGTTTTAGCCATTTCTATGTAATTTCTTTGCACATGCTCTCTTTTGCACCGGAAGCTCCTGACAGCTCAACGTATCACAATGAAGATTTAAATCGGGATCACAGAACACTTTCATGCGGTAATGCCTCAACCTCCTCGCACTTAACCGAATCACTGAAGGACACCTGGTCCCATGCCTGAACCAACAAATCAGACCGTTCAGCTAATCCTTCCTTATCATAGTCTTGCTTGGTAAAAAGAATAACAAcaatcattaatttaaataaaataaaagtccaaCATAAAACGTAATAAGCATAAACGTAATTCATCTCTGAAGTCTTTAAGTGAGTGGTAGCGCTAAAAGTTACATGTTAATGAACTCGAACAACTTTTGCTATTTAACtgttcagagtgtgtgtgtgtgtgggtggatcctgaaaatgaataattaaaaacccAATAACTACCAGTAGGTGGTAGCCTAAGACCACAAAGCTTTAGCAGGCTATTCGTGTTGATGGTTTGTATTTGGTCGGTGATACGTTAGATCTTGATGGTTGAGATCAGTAGGTGGTAGGCTAGATGTTTGAGGGGTTGATGTGGGTGGAGGGATGGATGTAGATGGTGTGGTTCGCAAAAATTCTTAAACGAAAGAATGTATGGCATGAAACTGACGCTTATTGGTTTACACCTTTTTCATCACAGATTGCAATATGCTTTGTTTCTGGTGAGGTGTGTTTGAATGAGCAATGTGTAGCTTCACGGAGTGGCAAGGACAGTACacgataaaaaaacaaataaatgtaaaaaatcttaaaaaatcttaaaaaaaaaaactaaatgcagcAGGGGCGCCAGAAAATGGcttgaaacaaaaaacaaacaaaaaaactaatttcttgTTCCATAATTACAGGTTATTACTGTaagtataattttaatatacataaaatcttttttacttttgacaaCAATTTTCAGAATACATTAATACACCTTTGAAATAAAACGATTGTCTTTTAtagaatgattaaaaaaaaagcttaggTACAGATAATTActgttgttattataaaaaaaacagtaaatctAAGTGTCGATACAAATTATGATATTGTTTGTATACattaactgtaaaattactTTACTGTAAACTTTATTCTAGGCTTCATTTTCACTGATAATAAACTCAACTCAACTTTGTTAT

Function

GO:

id name namespace
GO:0042611 MHC protein complex cellular_component
GO:0042613 MHC class II protein complex cellular_component
GO:0097367 carbohydrate derivative binding molecular_function
GO:0017076 purine nucleotide binding molecular_function
GO:0035639 purine ribonucleoside triphosphate binding molecular_function
GO:0043168 anion binding molecular_function
GO:0032553 ribonucleotide binding molecular_function
GO:0032555 purine ribonucleotide binding molecular_function

KEGG:

id description
ko04612 Antigen processing and presentation
ko04672 Intestinal immune network for IgA production
ko05320 Autoimmune thyroid disease
ko05330 Allograft rejection
ko05332 Graft-versus-host disease

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237363.1 False 3234 mRNA 0.41 6 19981179 19990007
XM_043237364.1 False 3171 mRNA 0.42 6 19981179 19990088
XM_043237365.1 True 3913 mRNA 0.41 6 19981179 19990007

Neighbor

gene id symbol gene type direction distance location
LOC122342256 NA coding downstream 227056 19752414 ~ 19754123 (-)
LOC122342252 LOC107695509,LOC107701922 coding downstream 303859 19662898 ~ 19677320 (-)
LOC122342247 NA coding downstream 506512 19471433 ~ 19474667 (-)
LOC122343103 NA coding downstream 963952 19015085 ~ 19017227 (-)
LOC122342237 NA coding downstream 1010642 18967261 ~ 18970537 (-)
LOC122343115 NA coding upstream 596 19990684 ~ 19994596 (-)
trnal-aag NA coding upstream 70501 20060589 ~ 20060671 (-)
trnal-cag NA coding upstream 71264 20061352 ~ 20061432 (-)
trnal-aag_1 NA coding upstream 72387 20062475 ~ 20062557 (-)
trnal-cag_1 NA coding upstream 73168 20063256 ~ 20063338 (-)
G29853 NA non-coding downstream 456 19980489 ~ 19980723 (-)
G29851 NA non-coding downstream 820 19979957 ~ 19980359 (-)
G29847 NA non-coding downstream 5038 19975231 ~ 19976141 (-)
G29849 NA non-coding downstream 7732 19944294 ~ 19973447 (-)
LOC122343200 NA non-coding downstream 183922 19796736 ~ 19797257 (-)
G29896 NA non-coding upstream 55026 20045114 ~ 20196427 (-)
LOC122343174 NA non-coding upstream 152615 20142703 ~ 20144488 (-)
G29889 NA non-coding upstream 155619 20145707 ~ 20147299 (-)
G29900 NA non-coding upstream 162806 20152894 ~ 20153445 (-)
trnal-aag_25 NA non-coding upstream 220468 20210556 ~ 20210638 (-)
LOC122342243 NA other downstream 643687 19333729 ~ 19337492 (-)
G29787 NA other downstream 1049304 18931536 ~ 18931875 (-)
LOC122343130 NA other downstream 1063646 18916326 ~ 18917533 (-)
LOC122343082 NA other downstream 1078627 18898807 ~ 18902552 (-)
LOC122342944 LOC107581743 other downstream 1245539 18693002 ~ 18735640 (-)
LOC122343146 NA other upstream 10900 20000988 ~ 20009712 (-)
G29902 NA other upstream 247049 20237137 ~ 20238554 (-)
G29906 NA other upstream 291018 20281106 ~ 20282400 (-)
LOC122343123 NA other upstream 868335 20858423 ~ 20864406 (-)
LOC122343098 NA other upstream 1058769 21048857 ~ 21053725 (-)

Expression


Co-expression Network