LOC122343061 (LOC107677814)


Basic Information

Item Value
gene id LOC122343061
gene name LOC107677814
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22587723 ~ 22593908 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237368.1
TTCAAATGAACACACTTCCAGAGAAACAAAGACCAGGCATGAGAGCAGAGATATCAATTGCATAGTTTGAGGCGTCAAACAGAAACATCAGACTCAGGACAGAAACACATCCTATCAAAAATGGGCCAAACtctatattttcttcttcttctaattGCTCTCTGTTCTGTATCTGAATGTGTTCGGCGTCAGTATGACTTTATAAATGAGAAGAAGACCTGGAATGAGGCTCAGAGATACTGCAGAGAGAGATACACAGATCTGGCCACCGTTGACAACATGAATGACTTGAATGAGCTGATCAAGAGTGTGAGTGATATAAGTCTTCAGTATGTCTGGATTGGGCTGCAGAAGACCGGTCTTAATAAATGGCAGTGGTCTTCAGGAGAACCTGCGCTCTATTTGAACTGGGCTCCTGGAAAACCAAATGGTGTAGATGACTGTGGAATAATTGCAAATGGACAATGGAATAATACACCGTGTGGTTCTAACCAGCAGTTCATCTGCAACGGGAGTACAGGACTCGTCTTTGTCAATCAGGCAATGAATTGGAGAGACGCTCAGAGTTACTGCAGACAGAATCACATTGATCTGGTCAGTGTGAGGAACCAGAATGAGAATCAACAGATCATCAGTGATATAACGTTATCTGGTTCATGCATCTGGATTGGTCTGTTCAGAGACTCATGGCAGTGGTCAGATCTGAGTAACTCTTCATTCAGATATTGGAAACCTGGTCAACCTGATAATTCTGGAGGTAATGAAGGCTGTGTAGTGACTGAACCGAACGCTCAGGGACAATGGCATGACATCTCTTGCACCAATCAGTTTTCCTTTGTGTGTCATGAAGACGCTGAACTGATTCTGATCAGAGAGAATCTGACGTGGGCCGAAGCTCTGAGATACTGCAGACAGAATCACGTGGATCTGGTCTCAGTTCATTCAGAAGAGATGCAGCATCGTGTGAAGAACGTGGTTAAACGGGCGTCTACTGCAGTGGTGTGGATGGGTTTACACAACTACTGCGTCATGAACATGTGGCTCTGGCTGAGTGGAGAGATCGTGTGTTATCAGAACTGGGCTCCAGGGAACGGAACGACGCAAGAAAACTGCAAACTCGAGAAGAGAAAAGGAGCCGTTCAGTCTGGAGGAGATCAGCGCTGGATCAGCCTTCCTGAATCTTACAAACTCAACTTCGTCTGCAGCAGAAATTAAGAGCTTTGCTTACATTCACGGTTTTTATGAGttacttttacatttgatttaggAATTTCTGAGTTAATCTGCTTATTGGGTTTAAAAGTGGCCAGAagtctgtttatttctgtaCCGTAAAATTAGGGCTGGTAATTTAACacattaattagattaaataacTACAGTAAAATTGAACAcgttaaaatgtattcatgcatttaaaatacttgcCCTGCCCCAGACCTACGTGGGTCATCTGACATTTCATGCAGTTAACTGATGACGAATATGAGGCAGGGCATGGAGTCTAGAGAATGCAGCTCATTTGTGCTGTGGAGTTGTGCAAGGAAGAAATAGGTATATTTAGAAAAACCCAAAATGAGTCAACAGTTTGGAATCATTTAATGTGGTGTCTAAGAGATACAGGATTGTATATGGTTATATagagttttttaaatatttatttagttttactaaaTTTTTGAAGCTAATCACTTCACTCTCCTGTCCAGTTGGTGGCAGTAAACGCAGCATCCATAGATACATAAGATCAAGTGACCTCTGCCTTCTCTTAATTCACAAAATCAAACTTAAAAATTGCGAGAACAAAGCTTTGGAAAAGCCTtagttgtgttttaaatgtgctctgtgcataaataaatattgctgttGTTAATGAAGAGAGTTCATGTGGTCAAACTACAAATTCGAATAAACCAGATATGCTTTGCAAATTTACGTTTAACTTTTCAGAAGACAACATCTATCGTGACATCCAACTCAGTCACTTCTATTTATCAATCTTTGCGCTTCATCCATTCAATGTAACTATTTAGTAGTCGTTAGTTACTCTTGTCTATgccttttgttaataaaatccCTTTTTATTACACATGTGTGTTCC
>XM_043237369.1
CAAAGACCAGGCATGAGAGCAGAGATATCAATTGCATAGTTTGAGGCGTCAAACAGAAACATCAGACTCAGGACAGAAACACATCCTATCAAAAATGGGCCAAACtctatattttcttcttcttctaattGAACGCTGGCCATCAAACGTGAATGTCTAGAAACCTAAAACTAACTTCACTACACTTTTTGAGCCAAAGCGCTAAATCCGACCCTCACTTTCTCAGCTCTCTGTTCTGTATCTGAATGTGTTCGGCGTCAGTATGACTTTATAAATGAGAAGAAGACCTGGAATGAGGCTCAGAGATACTGCAGAGAGAGATACACAGATCTGGCCACCGTTGACAACATGAATGACTTGAATGAGCTGATCAAGAGTGTGAGTGATATAAGTCTTCAGTATGTCTGGATTGGGCTGCAGAAGACCGGTCTTAATAAATGGCAGTGGTCTTCAGGAGAACCTGCGCTCTATTTGAACTGGGCTCCTGGAAAACCAAATGGTGTAGATGACTGTGGAATAATTGCAAATGGACAATGGAATAATACACCGTGTGGTTCTAACCAGCAGTTCATCTGCAACGGGAGTACAGGACTCGTCTTTGTCAATCAGGCAATGAATTGGAGAGACGCTCAGAGTTACTGCAGACAGAATCACATTGATCTGGTCAGTGTGAGGAACCAGAATGAGAATCAACAGATCATCAGTGATATAACGTTATCTGGTTCATGCATCTGGATTGGTCTGTTCAGAGACTCATGGCAGTGGTCAGATCTGAGTAACTCTTCATTCAGATATTGGAAACCTGGTCAACCTGATAATTCTGGAGGTAATGAAGGCTGTGTAGTGACTGAACCGAACGCTCAGGGACAATGGCATGACATCTCTTGCACCAATCAGTTTTCCTTTGTGTGTCATGAAGACGCTGAACTGATTCTGATCAGAGAGAATCTGACGTGGGCCGAAGCTCTGAGATACTGCAGACAGAATCACGTGGATCTGGTCTCAGTTCATTCAGAAGAGATGCAGCATCGTGTGAAGAACGTGGTTAAACGGGCGTCTACTGCAGTGGTGTGGATGGGTTTACACAACTACTGCGTCATGAACATGTGGCTCTGGCTGAGTGGAGAGATCGTGTGTTATCAGAACTGGGCTCCAGGGAACGGAACGACGCAAGAAAACTGCAAACTCGAGAAGAGAAAAGGAGCCGTTCAGTCTGGAGGAGATCAGCGCTGGATCAGCCTTCCTGAATCTTACAAACTCAACTTCGTCTGCAGCAGAAATTAAGAGCTTTGCTTACATTCACGGTTTTTATGAGttacttttacatttgatttaggAATTTCTGAGTTAATCTGCTTATTGGGTTTAAAAGTGGCCAGAagtctgtttatttctgtaCCGTAAAATTAGGGCTGGTAATTTAACacattaattagattaaataacTACAGTAAAATTGAACAcgttaaaatgtattcatgcatttaaaatacttgcCCTGCCCCAGACCTACGTGGGTCATCTGACATTTCATGCAGTTAACTGATGACGAATATGAGGCAGGGCATGGAGTCTAGAGAATGCAGCTCATTTGTGCTGTGGAGTTGTGCAAGGAAGAAATAGGTATATTTAGAAAAACCCAAAATGAGTCAACAGTTTGGAATCATTTAATGTGGTGTCTAAGAGATACAGGATTGTATATGGTTATATagagttttttaaatatttatttagttttactaaaTTTTTGAAGCTAATCACTTCACTCTCCTGTCCAGTTGGTGGCAGTAAACGCAGCATCCATAGATACATAAGATCAAGTGACCTCTGCCTTCTCTTAATTCACAAAATCAAACTTAAAAATTGCGAGAACAAAGCTTTGGAAAAGCCTtagttgtgttttaaatgtgctctgtgcataaataaatattgctgttGTTAATGAAGAGAGTTCATGTGGTCAAACTACAAATTCGAATAAACCAGATATGCTTTGCAAATTTACGTTTAACTTTTCAGAAGACAACATCTATCGTGACATCCAACTCAGTCACTTCTATTTATCAATCTTTGCGCTTCATCCATTCAATGTAACTATTTAGTAGTCGTTAGTTACTCTTGTCTATgccttttgttaataaaatccCTTTTTATTACACATGTGTGTTCC
>XM_043237370.1
AGGCATGAGAGCAGAGATATCAATTGCATAGTTTGAGGCGTCAAACAGAAACATCAGACTCAGGACAGAAACACATCCTATCAAAAATGGGCCAAACtctatattttcttcttcttctaattGTATGACTTTATAAATGAGAAGAAGACCTGGAATGAGGCTCAGAGATACTGCAGAGAGAGATACACAGATCTGGCCACCGTTGACAACATGAATGACTTGAATGAGCTGATCAAGAGTGTGAGTGATATAAGTCTTCAGTATGTCTGGATTGGGCTGCAGAAGACCGGTCTTAATAAATGGCAGTGGTCTTCAGGAGAACCTGCGCTCTATTTGAACTGGGCTCCTGGAAAACCAAATGGTGTAGATGACTGTGGAATAATTGCAAATGGACAATGGAATAATACACCGTGTGGTTCTAACCAGCAGTTCATCTGCAACGGGAGTACAGGACTCGTCTTTGTCAATCAGGCAATGAATTGGAGAGACGCTCAGAGTTACTGCAGACAGAATCACATTGATCTGGTCAGTGTGAGGAACCAGAATGAGAATCAACAGATCATCAGTGATATAACGTTATCTGGTTCATGCATCTGGATTGGTCTGTTCAGAGACTCATGGCAGTGGTCAGATCTGAGTAACTCTTCATTCAGATATTGGAAACCTGGTCAACCTGATAATTCTGGAGGTAATGAAGGCTGTGTAGTGACTGAACCGAACGCTCAGGGACAATGGCATGACATCTCTTGCACCAATCAGTTTTCCTTTGTGTGTCATGAAGACGCTGAACTGATTCTGATCAGAGAGAATCTGACGTGGGCCGAAGCTCTGAGATACTGCAGACAGAATCACGTGGATCTGGTCTCAGTTCATTCAGAAGAGATGCAGCATCGTGTGAAGAACGTGGTTAAACGGGCGTCTACTGCAGTGGTGTGGATGGGTTTACACAACTACTGCGTCATGAACATGTGGCTCTGGCTGAGTGGAGAGATCGTGTGTTATCAGAACTGGGCTCCAGGGAACGGAACGACGCAAGAAAACTGCAAACTCGAGAAGAGAAAAGGAGCCGTTCAGTCTGGAGGAGATCAGCGCTGGATCAGCCTTCCTGAATCTTACAAACTCAACTTCGTCTGCAGCAGAAATTAAGAGCTTTGCTTACATTCACGGTTTTTATGAGttacttttacatttgatttaggAATTTCTGAGTTAATCTGCTTATTGGGTTTAAAAGTGGCCAGAagtctgtttatttctgtaCCGTAAAATTAGGGCTGGTAATTTAACacattaattagattaaataacTACAGTAAAATTGAACAcgttaaaatgtattcatgcatttaaaatacttgcCCTGCCCCAGACCTACGTGGGTCATCTGACATTTCATGCAGTTAACTGATGACGAATATGAGGCAGGGCATGGAGTCTAGAGAATGCAGCTCATTTGTGCTGTGGAGTTGTGCAAGGAAGAAATAGGTATATTTAGAAAAACCCAAAATGAGTCAACAGTTTGGAATCATTTAATGTGGTGTCTAAGAGATACAGGATTGTATATGGTTATATagagttttttaaatatttatttagttttactaaaTTTTTGAAGCTAATCACTTCACTCTCCTGTCCAGTTGGTGGCAGTAAACGCAGCATCCATAGATACATAAGATCAAGTGACCTCTGCCTTCTCTTAATTCACAAAATCAAACTTAAAAATTGCGAGAACAAAGCTTTGGAAAAGCCTtagttgtgttttaaatgtgctctgtgcataaataaatattgctgttGTTAATGAAGAGAGTTCATGTGGTCAAACTACAAATTCGAATAAACCAGATATGCTTTGCAAATTTACGTTTAACTTTTCAGAAGACAACATCTATCGTGACATCCAACTCAGTCACTTCTATTTATCAATCTTTGCGCTTCATCCATTCAATGTAACTATTTAGTAGTCGTTAGTTACTCTTGTCTATgccttttgttaataaaatccCTTTTTATTACACATGTGTGTTCC
>XM_043237371.1
ATTCAAATGAACACACTTCCAGAGAAACAAAGACCAGGCATGAGAGCAGAGATATCAATTGCATAGTTTGAGGCGTCAAACAGAAACATCAGACTCAGGACAGAAACACATCCTATCAATATGACTTTATAAATGAGAAGAAGACCTGGAATGAGGCTCAGAGATACTGCAGAGAGAGATACACAGATCTGGCCACCGTTGACAACATGAATGACTTGAATGAGCTGATCAAGAGTGTGAGTGATATAAGTCTTCAGTATGTCTGGATTGGGCTGCAGAAGACCGGTCTTAATAAATGGCAGTGGTCTTCAGGAGAACCTGCGCTCTATTTGAACTGGGCTCCTGGAAAACCAAATGGTGTAGATGACTGTGGAATAATTGCAAATGGACAATGGAATAATACACCGTGTGGTTCTAACCAGCAGTTCATCTGCAACGGGAGTACAGGACTCGTCTTTGTCAATCAGGCAATGAATTGGAGAGACGCTCAGAGTTACTGCAGACAGAATCACATTGATCTGGTCAGTGTGAGGAACCAGAATGAGAATCAACAGATCATCAGTGATATAACGTTATCTGGTTCATGCATCTGGATTGGTCTGTTCAGAGACTCATGGCAGTGGTCAGATCTGAGTAACTCTTCATTCAGATATTGGAAACCTGGTCAACCTGATAATTCTGGAGGTAATGAAGGCTGTGTAGTGACTGAACCGAACGCTCAGGGACAATGGCATGACATCTCTTGCACCAATCAGTTTTCCTTTGTGTGTCATGAAGACGCTGAACTGATTCTGATCAGAGAGAATCTGACGTGGGCCGAAGCTCTGAGATACTGCAGACAGAATCACGTGGATCTGGTCTCAGTTCATTCAGAAGAGATGCAGCATCGTGTGAAGAACGTGGTTAAACGGGCGTCTACTGCAGTGGTGTGGATGGGTTTACACAACTACTGCGTCATGAACATGTGGCTCTGGCTGAGTGGAGAGATCGTGTGTTATCAGAACTGGGCTCCAGGGAACGGAACGACGCAAGAAAACTGCAAACTCGAGAAGAGAAAAGGAGCCGTTCAGTCTGGAGGAGATCAGCGCTGGATCAGCCTTCCTGAATCTTACAAACTCAACTTCGTCTGCAGCAGAAATTAAGAGCTTTGCTTACATTCACGGTTTTTATGAGttacttttacatttgatttaggAATTTCTGAGTTAATCTGCTTATTGGGTTTAAAAGTGGCCAGAagtctgtttatttctgtaCCGTAAAATTAGGGCTGGTAATTTAACacattaattagattaaataacTACAGTAAAATTGAACAcgttaaaatgtattcatgcatttaaaatacttgcCCTGCCCCAGACCTACGTGGGTCATCTGACATTTCATGCAGTTAACTGATGACGAATATGAGGCAGGGCATGGAGTCTAGAGAATGCAGCTCATTTGTGCTGTGGAGTTGTGCAAGGAAGAAATAGGTATATTTAGAAAAACCCAAAATGAGTCAACAGTTTGGAATCATTTAATGTGGTGTCTAAGAGATACAGGATTGTATATGGTTATATagagttttttaaatatttatttagttttactaaaTTTTTGAAGCTAATCACTTCACTCTCCTGTCCAGTTGGTGGCAGTAAACGCAGCATCCATAGATACATAAGATCAAGTGACCTCTGCCTTCTCTTAATTCACAAAATCAAACTTAAAAATTGCGAGAACAAAGCTTTGGAAAAGCCTtagttgtgttttaaatgtgctctgtgcataaataaatattgctgttGTTAATGAAGAGAGTTCATGTGGTCAAACTACAAATTCGAATAAACCAGATATGCTTTGCAAATTTACGTTTAACTTTTCAGAAGACAACATCTATCGTGACATCCAACTCAGTCACTTCTATTTATCAATCTTTGCGCTTCATCCATTCAATGTAACTATTTAGTAGTCGTTAGTTACTCTTGTCTATgccttttgttaataaaatccCTTTTTATTACACATGTGTGTTCC

Function

NR:

description
PREDICTED: C-type mannose receptor 2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237368.1 False 2101 mRNA 0.40 5 22587723 22593907
XM_043237369.1 True 2170 mRNA 0.41 5 22587723 22593881
XM_043237370.1 False 2032 mRNA 0.40 5 22587723 22593873
XM_043237371.1 False 2028 mRNA 0.40 4 22587723 22593908

Neighbor

gene id symbol gene type direction distance location
LOC122342314 LOC107575554,LOC107666720 coding downstream 2260 22578346 ~ 22585463 (-)
LOC122342313 LOC107703281,LOC107657504,LOC107693510,LOC107570418 coding downstream 10229 22568224 ~ 22577494 (-)
LOC122343060 LOC107677814 coding downstream 88194 22495286 ~ 22499529 (-)
LOC122343006 NA coding downstream 156100 22429074 ~ 22431623 (-)
LOC122342948 LOC107575457,LOC107741609 coding downstream 192123 22385863 ~ 22395600 (-)
LOC122342315 NA coding upstream 6638 22600546 ~ 22608778 (-)
LOC122342316 NA coding upstream 43513 22637421 ~ 22643780 (-)
LOC122343051 LOC107710267,LOC107704474,LOC107730816 coding upstream 82550 22676458 ~ 22681205 (-)
LOC122343088 znf728,LOC107572918,LOC107713773 coding upstream 96430 22690338 ~ 22692710 (-)
LOC122343013 NA coding upstream 165513 22759421 ~ 22769574 (-)
G30547 NA non-coding downstream 17665 22569635 ~ 22570058 (-)
G30525 NA non-coding downstream 86549 22500162 ~ 22501174 (-)
G30520 NA non-coding downstream 99554 22487420 ~ 22488169 (-)
G30518 NA non-coding downstream 100604 22486775 ~ 22487119 (-)
G30506 NA non-coding downstream 158966 22425592 ~ 22428757 (-)
G30920 NA non-coding upstream 176947 22770855 ~ 22772854 (-)
G30926 NA non-coding upstream 193638 22787546 ~ 22789302 (-)
G30938 NA non-coding upstream 264351 22858259 ~ 22861620 (-)
G30967 LOC107561645 non-coding upstream 457840 23051748 ~ 23053620 (-)
G30992 NA non-coding upstream 669824 23263732 ~ 23264216 (-)
G30450 NA other downstream 342563 22128454 ~ 22245160 (-)
G30457 NA other downstream 371253 22216035 ~ 22216470 (-)
LOC122343153 NA other downstream 804132 21387853 ~ 21783591 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other upstream 822983 23416891 ~ 23437015 (-)
G31017 NA other upstream 884617 23478525 ~ 23546369 (-)
G31050 NA other upstream 1151578 23745486 ~ 23771768 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other upstream 1516316 24110224 ~ 24110673 (-)
G31134 NA other upstream 1710188 24304096 ~ 24497596 (-)

Expression


Co-expression Network