LOC122343062


Basic Information

Item Value
gene id LOC122343062
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18193309 ~ 18196521 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237372.1
AATGACGTAGATGTTTATAAGTTAATGAGACTCAGCTGCTGGGAAACTGAAGAGCAGGCTCGGTTAAAGAGACGCGTTCGCTGGCGTTCGGCTGAAGATGGGTTCAGAACGGCTGCTGTTGATGATGTTCGCCGTCGCTGCAGCGGCACAGAACGATGTGTCGGTGGACTGCGGCCGGGACTCGGTGACGGTCCGCTGGAGTCCGGTCTCTCCTCAGAAGCCGGATCCGTCCAGAGCTCTTCTGGGAGCCTGTCCTCCGAGCTCGAGCTCCGCGGAGTCCGGTCACGAGCTGCTCTTCTCCTCGTCTCTGCTCGACTGCGGCTTTCAGCGGAAGGTCACTCAGGACCGGGTCACTTACAGTAACCTGCTGACCTACGACCGGCGGCCGGCGGGGCCCTTCCTCTCTCGCTCCGTCCAGTGCGTCTATGAGCTAGCTGTGAGCGGTGCtgaggaagaggatgaaggAGTGGTGACCTTCAGCTTGGAGCTCATGAACAGTGATTTCAGCGCTCCGGCCGAGTCTCTGCGCTTCCGGCTGGGCTCCGCTCTTCAGGTCAGAGCCGCGGTGGAGTCTCGGAGCCGCAGGCCGCTCTGGATCTACATGCAGAGCTGTATAGCTTCCACAGATGCAGACATTGGCCGCGCCGCTCGAGTACATCCCGTCATCAGCAACGACGGGTGTCTGATGGAGAGTAAATGGGGAAACTCCAGCTTTCTGCCGAGGCGGCATCCTGCTGAAATACGCCTCCATCTCCAAGCCTTCAAGTTTGCTCTTGGACAGAAAATCTTTCTTCTCTGTGATCTGGAGGCGTGGGATGTCCAGCGCATCGACCGGAGAGAGTGTCACTACATCAAGCAGCAGCGCAggtGGGAGCTGCTGGATGATCGGTCTCAGAGCTACATCTGCTCTTCCTGTGATTCCAGTTTCTTCCAGAGGACCGAAGCAGAGAGAGGCATGTCGGCTCACAAAGTCCTGGGGCCGTTTGTGATGGAGGAGGAATCTCTGGAGACACAGTCAAGCAGCGAGCGTGGTCTCAGTGATGTTCCGGTCTGGCTGATGCTGCTGTTGGTTTCGGTGGCGCTGGGGACTGTCATGGGTGCTTTAGCCATCAGTTATTACCTGTGTTTCTGGAGAGGAGGACGCTTGGGCTACAGGCCCAGCAGAGATCTTCTCACCAAATACTGACTCTGAGCTTCACAATAAACCTGCTGAAGTGA

Function

GO:

id name namespace
GO:0008406 gonad development biological_process
GO:0045137 development of primary sexual characteristics biological_process
GO:0007548 sex differentiation biological_process
GO:0061458 reproductive system development biological_process
GO:0048608 reproductive structure development biological_process
GO:0061134 peptidase regulator activity molecular_function
GO:0061135 endopeptidase regulator activity molecular_function
GO:0030414 peptidase inhibitor activity molecular_function
GO:0004857 enzyme inhibitor activity molecular_function
GO:0004866 endopeptidase inhibitor activity molecular_function
GO:0030234 enzyme regulator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237372.1 True 1218 mRNA 0.57 10 18193309 18196521

Neighbor

gene id symbol gene type direction distance location
tbx3a LOC107742157,LOC107597930,LOC107687999,LOC107728866,LOC107566860,LOC107670392 coding downstream 126144 18059325 ~ 18067165 (-)
tbx5a tbx5,LOC107670381,LOC107729059,LOC107745406,LOC107688016 coding downstream 151361 18028498 ~ 18041948 (-)
rab14l Rab14,rab14,LOC105889591,LOC107566859,LOC101069277,LOC103390174,LOC103045876,LOC107670386,LOC107674917,LOC107729136 coding downstream 223741 17963589 ~ 17969568 (-)
spra LOC107597947 coding downstream 260890 17927787 ~ 17932419 (-)
smyd1a smyd1,LOC107745315,LOC107597934 coding downstream 266612 17915571 ~ 17926697 (-)
mtfp1 mtfp1,LOC107565646,LOC107566856 coding upstream 2529 18199050 ~ 18202131 (-)
wbp1 LOC107670394,LOC107728527,LOC106563291 coding upstream 17026 18213547 ~ 18218528 (-)
LOC122343150 LOC107570416,LOC107749047 coding upstream 178806 18375327 ~ 18431434 (-)
LOC122342232 LOC107685875,LOC107749047,LOC107728228,LOC107671223 coding upstream 248931 18445452 ~ 18476759 (-)
ptprr ptprr,LOC107684538,LOC107709966,LOC107690749,LOC107747646 coding upstream 329485 18526006 ~ 18544653 (-)
G29487 NA non-coding downstream 207491 17985013 ~ 17985818 (-)
G29457 NA non-coding downstream 252520 17873152 ~ 17940789 (-)
LOC122343170 NA non-coding downstream 363366 17828586 ~ 17829943 (-)
G29445 NA non-coding downstream 369045 17823219 ~ 17824264 (-)
G29442 LOC107599601 non-coding downstream 370839 17819360 ~ 17822470 (-)
G29656 NA non-coding upstream 184469 18380990 ~ 18409895 (-)
G29662 NA non-coding upstream 239124 18435645 ~ 18465837 (-)
G29663 NA non-coding upstream 240046 18436567 ~ 18461313 (-)
G29680 LOC107747644,LOC107709964,LOC107690747,LOC107687572,LOC107562152 non-coding upstream 359979 18556500 ~ 18559281 (-)
G29682 trim24,LOC107562152,LOC107690747,LOC107747644 non-coding upstream 366633 18563154 ~ 18564445 (-)
G29473 NA other downstream 213387 17970605 ~ 17979922 (-)
LOC122342228 scgn,LOC107693759,LOC107757885,LOC107669120,LOC107714763,LOC107747999,LOC107663245 other downstream 448766 17734606 ~ 17744543 (-)
G29417 NA other downstream 457035 17735350 ~ 17736274 (-)
srd5a3 srd5a3,LOC107755245,LOC107683999,LOC107665336,LOC107601910 other downstream 554567 17637023 ~ 17638742 (-)
xrcc3 xrcc3,LOC107755221,LOC107683971,LOC107560377 other downstream 1071180 17118343 ~ 17122129 (-)
G29653 LOC107663329,LOC107575399,LOC107749046,LOC107758217,LOC107576964,LOC107665206,LOC107571858,LOC107671223,LOC107576424 other upstream 212039 18408560 ~ 18428343 (-)
LOC122343054 NA other upstream 458723 18655244 ~ 18661653 (-)
LOC122342944 LOC107581743 other upstream 496481 18693002 ~ 18735640 (-)
LOC122343082 NA other upstream 702286 18898807 ~ 18902552 (-)
LOC122343130 NA other upstream 719805 18916326 ~ 18917533 (-)

Expression


Co-expression Network