LOC122343067


Basic Information

Item Value
gene id LOC122343067
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22103318 ~ 22104932 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237385.1
AACTCGGGCCGAGCAGGTTCAGGTTTAGACACCTTGATGTAGGATCCTGCATAGATGCGTTACACAGCTACAAGGTTGATGTTGTTTGCTCTGTGCTATTGAACTGGGGTTAACTTTTATTTGTTCGGTCTTCCACCTTAGACTCAACAGTGCTGAAAGAGGAGCAGGAAGAAACTGAAGAGAAATATCAGTATGAGAACCCTCATGATTTCCTAGAAAAATCGTTTAGTAGTTTACAGTCCGAAAAGAGTTCCACACAAAAAAGGGATGGGATTCGTTTCCCCTGctttcagtgtggaaagagttttagtCGTAAGGCAACCCTCAAAAGCCACATGAAAACTCACCCTGAAGAGAATATGTTCACCTGCACACACTGTGGAAAAAGTTTCGGCACAAAATTGAAACTGAAATACCACACGAAAGTTCACAATGGAAACAAACCCTTCACGTGCAAACAGTGTGGAAGGAGCTTCACTCAGAAAGGAAGCCTTAAGAAGCACATGGCCATTCACACTGGAAAGAGGCCTTACGCGtgccctcagtgtggaaagagcttcagTCAAAAGGGAGGCCTCAAGAAGCACATCTCAACTCACACAGGGGAGAAGCCTTTCACATGCCCTCGgtgcggaaagagtttcagCCAAAAGGGAGGCCTTAAGATCCACATgaggattcacaccggagagaagccgttcacATGCcctcagtgcggaaagagtttcagtCAAAAGGAAGGTCTTAAGAAGCACGTGAcgattcacaccggagagaagccttacgcGTGCCCTCGGTGCGGAAAGAGCTTCAGTCAGCGAGGAAGCCTCGAGGgccacatgagagttcacaccggagagaagccgttcacATGCACTCACTGCTTGAAGAGTTTCAGTCACTCCGGATCCCTCAGATACCACATCATGAAAGTTTGCAATAAAGAGAAGCCCGACAGATCCCcccagtgtggaaagagttccGGTCAAAGTGGAAAACACGGGACGCTTCAAGCCGGAGACAAGCCTTTCACGTgcaaacagtgtggaaagagtttcactcAAAAAGGAAACCTCAACAAGCACGTGAccattcacaccggagagaagccgttcacGTGCAAACAGTGCGGAAAGGGATTCACTCAAAAAGGAGGCCTTAATATGCACATGAGGATTCACACCGGGGAGAAACCTTTTACGTGcgatcagtgcgggaagagttaCCCTCGAAAAGGAGGCCTCAAGATACACATGAGAACTCACACCGGGGAGAAGCCTTTCGCTTgcaaacagtgtggaaagagtttcagtcaGCGAGGCAGCCTTGACATGCACATTGAAATTCACAACCGAGAGAAGCCTAAAGGAAAAACTGAAGAAcgaactgaactgaaatgacTTGTCTTTTTAAACTAAATCGGGCTTCTGTAAAGCAGACTCTTTGGGGAGttagttttgaattctaaacaCCTTTGAGCTACCGAGGCGGTTAGTGTGGGTGTGTTCTGAAACTCCACCTTCTTTTGACGCGGGATTTATTTTCCCCTGTTTGTTTCAGGCAAAACGGCAACGTCTCCGATTCATTATATGCATAGTGTGCTGCCACAGATATA

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237385.1 True 1615 mRNA 0.47 1 22103318 22104932

Neighbor

gene id symbol gene type direction distance location
LOC122342305 LOC107697548,LOC107574116,LOC107758214 coding upstream 261088 21841181 ~ 21842230 (+)
LOC122343035 NA coding upstream 288881 21809156 ~ 21814437 (+)
LOC122343020 LOC107667978,LOC107741456,LOC107575631,LOC107563545 coding upstream 294239 21673802 ~ 21809079 (+)
LOC122343144 NA coding upstream 361013 21741323 ~ 21742305 (+)
LOC122342967 LOC107569100,LOC107575457,LOC107679413,LOC107566978 coding upstream 412786 21673720 ~ 21690532 (+)
LOC122343041 zbtb24,LOC107736039 coding downstream 304 22105236 ~ 22107457 (+)
LOC122342312 NA coding downstream 299121 22404053 ~ 22405822 (+)
LOC122343018 LOC107705900 coding downstream 329122 22434054 ~ 22446278 (+)
LOC122343138 si:ch211-133h13.1,LOC107574515,LOC107574820 coding downstream 443685 22548617 ~ 22561763 (+)
LOC122342965 NA coding downstream 508183 22613115 ~ 22621886 (+)
G30130 NA non-coding upstream 292034 21749010 ~ 21811284 (+)
G30133 LOC107749047,LOC107571854,LOC107728228,LOC107669894 non-coding upstream 576307 21485712 ~ 21527011 (+)
G30132 NA non-coding upstream 581065 21479557 ~ 21522253 (+)
G30205 NA non-coding downstream 36412 22141344 ~ 22255433 (+)
G30206 NA non-coding downstream 57706 22162638 ~ 22240294 (+)
G30212 NA non-coding downstream 70023 22174955 ~ 22252519 (+)
G30226 NA non-coding downstream 145503 22250435 ~ 22251792 (+)
G30233 NA non-coding downstream 168879 22273811 ~ 22280970 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other upstream 342137 21368643 ~ 21761181 (+)
G30115 NA other upstream 461562 21639540 ~ 21641756 (+)
G30119 NA other upstream 473198 21388193 ~ 21630120 (+)
LOC122342286 LOC107578117 other upstream 928978 21169193 ~ 21174340 (+)
G30058 NA other upstream 960487 21118562 ~ 21142831 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other downstream 126538 22231470 ~ 22231924 (+)
LOC122342310 LOC107685875,LOC107671223,LOC107749047,LOC107728228,LOC107576424 other downstream 191965 22296897 ~ 22305148 (+)
LOC122343019 LOC107705900 other downstream 556894 22661826 ~ 22682712 (+)
LOC122342317 NA other downstream 673051 22777983 ~ 22780139 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other downstream 1024174 23129106 ~ 23130189 (+)

Expression


Co-expression Network