LOC122343076 (LOC107718513,LOC107692125)


Basic Information

Item Value
gene id LOC122343076
gene name LOC107718513,LOC107692125
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22235757 ~ 22239007 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237393.1
CATAAGACCGCGCCGCGCTCCTGCGTCTGCGGCTCAGCTGGAGAAAGGACAAAGTGTTCAAACACGGAAAAACCTGACTGACGCGCGGTTGTAAAGATGGagcgtataaaaaaaaagagtgaagaaGTGAAGAGTAAAGAAACATTCAGACATGAAGAAgctgaggaacaaacagACCCGATGGCACTGAAAGAGAAGAGTGAAGAACTCAATGAAGCGGATGAGAAAGATCGTGATTTCATGAATGGGGAAAAATCCTTTAACTGTTCACAGACAGAAAAGACTTCAAGAAAAATGGCTCAAACGACGGGAGGAAGTTATATCGCCTGCCAACCGTTTGAAAAGGGTTTCAGTCAAACAGAAAGCATTAACAGGTCTGTGAGTATCCACACAGGAGAGAAACTATACGCGTGTCAACAGTGTGGAAGGAGTTTCACTCAACATCGACACCTTGAAGtccacatgagagttcacaccggagagaagccctttGCCTGCCAGCAGTGTGGAAAGCATTTCAGTCATAGAGTAAGTCTTAAAAGACACATgaggattcacaccggagagaagccgtacaCCTGTCAGCAGTGTGGGAGGAGTTTCACTCAGTCTGGACAGCTCGGGCTTCACATGAgcgttcacaccggagagaagccctacAAGTGCCCGCAGTGCGGAAGGAGTTTCAACCGAAAAGGAAACCTTCACTGCCACATGAAAATTCACACCGGAGAGCAGCCGTACACATACGATCAGTGTGAGAAGAGTTTTGATCAACAGGACGTCCTCGACGTCCACATGAGAACTCGTCGAGAGAAGCCCTACATCTGTCCTCAGTGTGGAAAGTGGTTTAATCATAAAGGACGCTTTGAGGACCACATAAGaactcacaccggagagaagcctttcaccTGCCAGCAGTGTGGGAAATGCTTCAGCCAAAAAGGAAACCTCGACAGgcacatgagagttcacaccggagagaagccctgTATATGTGGTCACTGCGGAAAGAGATTCAGATATAGAGCAGGACTTAAGTACCACATGAGGTTTCACATTTGAGAGCTTGGGTTACGCCTTTTCAGGCCCTGAAAACCATCCTAGCTGATTTTATGCTGCCAATGTAACATGGGTCATGTAATAACACCAGAGAGAAGCCTTTGCTCTGTGGAAAGACTTGCAGAAACCAGACAATCTTGAGCTTAACAGAAGCACCCCTGATATAATTCAATGCAGCCAAGCGGTGCATTTGGGCGTGTTGTCCCGCACTGGTCTCAAACTTGATT

Function

NR:

description
PREDICTED: gastrula zinc finger protein XlCGF8.2DB-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237393.1 True 1289 mRNA 0.47 3 22235757 22239007

Neighbor

gene id symbol gene type direction distance location
LOC122343106 NA coding downstream 356965 21870415 ~ 21878792 (-)
LOC122342306 LOC107749047,LOC107728228 coding downstream 375473 21847120 ~ 21860284 (-)
LOC122342303 NA coding downstream 455138 21775098 ~ 21780619 (-)
LOC122342300 LOC107575420,LOC107563545,LOC107575457,LOC107741456 coding downstream 499216 21714679 ~ 21736541 (-)
LOC122343036 LOC107563870,LOC107718524 coding downstream 572924 21655902 ~ 21662833 (-)
LOC122343126 si:ch211-232d10.1,LOC107747635,LOC107569099,LOC107698614,LOC107574820 coding upstream 76901 22315908 ~ 22320097 (-)
LOC122342947 NA coding upstream 86503 22325510 ~ 22334793 (-)
LOC122342948 LOC107575457,LOC107741609 coding upstream 146856 22385863 ~ 22395600 (-)
LOC122343006 NA coding upstream 190067 22429074 ~ 22431623 (-)
LOC122343060 LOC107677814 coding upstream 256279 22495286 ~ 22499529 (-)
G30423 LOC107575420,LOC107667978,LOC107563545 non-coding downstream 426139 21676876 ~ 21809618 (-)
G30425 NA non-coding downstream 559626 21673723 ~ 21676131 (-)
LOC122343179 LOC107667978,LOC107563545,LOC107741456 non-coding downstream 562333 21668810 ~ 21673424 (-)
G30408 NA non-coding downstream 735759 21499638 ~ 21499998 (-)
G30406 NA non-coding downstream 742850 21492264 ~ 21492907 (-)
G30465 NA non-coding upstream 41665 22280672 ~ 22281189 (-)
G30499 NA non-coding upstream 120210 22359217 ~ 22421953 (-)
LOC122343195 NA non-coding upstream 157511 22396518 ~ 22398023 (-)
G30506 NA non-coding upstream 186585 22425592 ~ 22428757 (-)
G30518 NA non-coding upstream 247768 22486775 ~ 22487119 (-)
G30457 NA other downstream 19287 22216035 ~ 22216470 (-)
LOC122343153 NA other downstream 452166 21387853 ~ 21783591 (-)
G30396 NA other downstream 458951 21629617 ~ 21776806 (-)
LOC122342302 NA other downstream 463358 21769124 ~ 21772399 (-)
G30372 NA other downstream 495427 21737091 ~ 21740330 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other upstream 1177884 23416891 ~ 23437015 (-)
G31017 NA other upstream 1239518 23478525 ~ 23546369 (-)
G31050 NA other upstream 1506479 23745486 ~ 23771768 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other upstream 1871217 24110224 ~ 24110673 (-)
G31134 NA other upstream 2065089 24304096 ~ 24497596 (-)

Expression


Co-expression Network