LOC122343092


Basic Information

Item Value
gene id LOC122343092
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18933707 ~ 18937665 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237417.1
CATTGAGTTGAACTTCCTTTTTACATTAATACGtgaaacattttcacaaaaggAGTTCCTTTCTGCTTAAATACCGGTCACTATGGGAGAGAAACTAGTGTTAGTTGGTTGATATTGAAGCTGTCCGATAGCGTAAGTCTAAATACAGAAAAGgataaaactccaaaaatatGCAAAGAAGAACCTCATTAACTTCTAAGGAAATGAGGAAGCTGTAAGAGTCATCCAAGTCATCCAAGAAGCGACTGTAACCATTTCATCTGCACCAAAAATGTCTGGAACTGTGAATGGTGGTATGGATAAAGGTTCAATAATGGACTCGGAAGACCGGATAGAAAAGACTGTCGATATCTACATCACTGCAGAAGCTGTAAGAGACATGAAACATAAGAAAGACACTGAGGACATCAATGCAACAACCCTTAAAACAGCCCAACCTACAGGAAGTGATGGTGTGAAGATCAGGAGCTCCAGAGCAGCTGTGGTGTGTTTGGTGTTGCTGTGTGTTCTTCTGCTGACCGCGGTCACTGCACTGGGGGTGTACATCCATAAGACGGGCGCAAACTACGCAGAAGAGAGGCGGCAGCTGTTAAGCAACATCACCAACTTCGCAGAAGAGAGTCAACTGCTGTCAAGCGAAATCGCCAACCTCACAAAAGAGAAACAGTGGCTTCTAACCAACATTACCAACTTAATTCAGCTAAATGTACAGTTCAATCAAGAGAAAAACGAACTGATAAAGTTTTTTCAAGATGGATGGATTTACTATCAGTTCGGTCTTTACTACGTTTCCAATGAGACGAAGAACTGGACCGAGAGCAGAAGATACTGtacagagagaggagcagatcTAGTGATCATAgagaacagacaaaaacaaGATTATGTGAAGAAGATATCCAATGGAAGTGACGTCTGGATTGGTCTGACCGACAGTGAAGTAGAGGGAACATGGAAATGGGTTGATAACAGCACCCTGCCCTCTGGCTCTGGGTTCTGGAAACAAGGAGAACCTAATGGAGGTACAGATGAGAACTGCGCTTTCAGTGGTTCAGCAGGACTGTTTGATTATATATGTTCTAACCTTTTAAAATGGATCTGCGagaggaaaaatataaaatgacattattatttgcatatatgctggaacatttaaacatttttgacattttctatttttcactTACTACCATTAGCctataatgtaaaatactttttttaatattcaagtcttaggaatagtttaccccaaaattataattctgccattaattactgACACTCATGTTCTTCCAAATCCGTAAGATCTTCATCTATCTTTGGAACACAACTTAACATCATTTTGATAAAATCCGAGAGCTCTCTGATCCCCCCACAAGATCCTAACACAATCAAGGTCCGGAAACGTAGCAAGGACATCGGGTTCAACCAGAATTTTAGGAAGCTActagaatactttttgttttttcttgcattttcttttcagttttgttaCTGAATGATTCagcattttgaacaaatcagttcaATCAATGACTCACAagtgacttactgccacctactggtggttTAGGATGTTTAGGACAATTTCTTTTTGACGTGACATAATGACGCAGTACTGTGCTCGAATatcctgcaaaaaaaacaatgcataatTTTTCGCCACATACCACAAAAAATGATAGACCTGGAGTTGCCCAGATCCAGATTAAAGAGTTGACGGTGACTAGCCACTGGTGACGTTATCAATGAAACACAAAGATGCGAATGTTTTGCAACATGCCACAATTTGCTAATTTATTAGAAGGAAAAAAGATACAAGTTCTGTCATACATCTCGTGAAAAAGTAGCAAAAACAATGCAACGTTAGCACTGAATagtttttgtgcaaaacaaTTGCATAGTCAACACTGTTCGTATCACTAACAACGTAACTCACAAAATACAAAGTCTATAAGCCTACTCACTGTCAGAGTGATATCTTCAATTCGTATAAACCAATGAAAGgttagataaataaaataaaagatgaaaatgattaacaatgcagattcgTTTTCACTGTTTTCTGTGGACATATTTTCCAggggtgccaatacttttggcCATAAGTGTTTTTCAGCCacaattcgttttttttttccagcttcatctttagaaaaatatttccaCACACTTGATATGCCTCCGCTGCTTTGCTGCAATGTTGTTTCTGTCAAAATCACAGCAAAAAGCCTCATGTCGGAGCAGTAAAGTTGAGCAGTCTCCACACCCATGATTTGGTTTATTAGCAGGGGGCAtatcattggaaaaaaaattaagaatacattttagtacGAAAGTTTTTGATGAATCATGAGTTATTTGTGAAAACATGtttagtgaatgagacccattattttgtgtatttggtgtaaagCAGTTATATATCACTTTCCACATATTGTACATtgttgtttctcctctaagccttGCCTTTCTGTAATGCTTCAATCTGTACAAAGCTCATCTCAAGTGTGCGATAGAAATGTTACTCTCCTTCCTATAATGTGATGCTGTGTGCCAGcgctatgacacaaaaacaataaaagccattcaaaagagg

Function

GO:

id name namespace
GO:0042116 macrophage activation biological_process
GO:0002274 myeloid leukocyte activation biological_process
GO:0002376 immune system process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237417.1 True 2605 mRNA 0.38 6 18933707 18937665

Neighbor

gene id symbol gene type direction distance location
LOC122343048 LOC107698963 coding upstream 11197 18918600 ~ 18922510 (+)
LOC122342974 NA coding upstream 18685 18908916 ~ 18915022 (+)
LOC122343078 LOC107730199 coding upstream 35917 18894901 ~ 18897790 (+)
LOC122343055 LOC107554755,LOC107730198,LOC107663244 coding upstream 63924 18865853 ~ 18869783 (+)
LOC122342961 NA coding upstream 101114 18823925 ~ 18832593 (+)
LOC122343037 LOC107698808,LOC107743352 coding downstream 13062 18950727 ~ 18953599 (+)
LOC122342236 NA coding downstream 22997 18960662 ~ 18962974 (+)
LOC122342238 NA coding downstream 126360 19064025 ~ 19067883 (+)
LOC122342239 NA coding downstream 209336 19147001 ~ 19150635 (+)
LOC122342242 NA coding downstream 327690 19265355 ~ 19268050 (+)
G29777 NA non-coding upstream 1017 18932319 ~ 18932690 (+)
LOC122343164 NA non-coding upstream 25883 18903235 ~ 18907824 (+)
G29633 NA non-coding upstream 118429 18814883 ~ 18815278 (+)
G29627 NA non-coding upstream 148461 18785045 ~ 18785246 (+)
G29600 NA non-coding upstream 268624 18662860 ~ 18665083 (+)
G29797 NA non-coding downstream 29722 18967387 ~ 18967714 (+)
G29803 NA non-coding downstream 108045 19045710 ~ 19053414 (+)
G29809 NA non-coding downstream 142103 19079768 ~ 19080189 (+)
LOC122343175 NA non-coding downstream 432106 19369771 ~ 19371889 (+)
LOC122343189 NA non-coding downstream 468238 19405903 ~ 19406459 (+)
G29642 NA other upstream 47305 18883179 ~ 18886402 (+)
G29545 NA other upstream 472390 18436460 ~ 18461317 (+)
G29526 NA other upstream 632518 18300415 ~ 18301189 (+)
atp5mj NA other upstream 1892877 17038419 ~ 17040830 (+)
G28982 NA other upstream 2459326 16473898 ~ 16474381 (+)
G29814 LOC107660256 other downstream 352555 19290220 ~ 19342911 (+)
G29835 NA other downstream 793597 19731262 ~ 19786128 (+)
LOC122343071 NA other downstream 808069 19745734 ~ 19750074 (+)
LOC122343063 NA other downstream 1100268 20037933 ~ 20043453 (+)
LOC122342270 NA other downstream 1406681 20344346 ~ 20346724 (+)

Expression


Co-expression Network