LOC122343093


Basic Information

Item Value
gene id LOC122343093
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24661829 ~ 24665576 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237418.1
gtcccACCCACTTGTTAAAAGTGATCTGCTCTACTAAAGACTataagagcatttctgaccactGAGAAGCACGGATTACTTCTTCTCTTTGTTTATCGGACATGCAGAAATGAGCTGGAAAATCCGCGTGATTGCGAAATTACGGCAAGACCGCTGTAGGGAAGCCAAACAAACTGCATCTATCTTCAGTCAACAACAGAATTCATGTAGAAGTGGTGAAGAGCACTGTCTaccaaaaattattaaacatGTCCGTAGGAGGATGTCTCAGACGGTCATCCCCATGACTTCTTCAACCCTCGTCATCCAGCTGCAGCCGGCGACACAAGCAGCTTCTCCTCTTCAAGGCCTTCAGGCGTTTCTCAAAGGACAACCCAAAGCCCTCGGGACGGTCCAGGTAATGATCGGTGTGCTGACTCTCCTGATGGGCATCGTGTCTACGGTTTATGGAGAAATCATCATTACCTACACGGCTCTTCCTTACTGGGGATCTCTCAGCtACATCATCGCAGGCTCGTTCTGCATCGCCgcagaaaacaaaatcaattccCCCTCCAGTTTGTGTTTGGTGAATGCTTCACTGGGAACAAATGTTTTCAGTACTGTAGTCGCAGGCatcatcattatttttctttcactggATTTTGTCGTATGGCCACACGTTTATTGCCAAGATAACTGTCAATTGTTCACGAAAGACCATGAGATCTTCTACAATGGAATCAGAGGTGTGTATATGTTACTCAACGTGTCTGAGTTTATCATCTCTATCTGTCTGGCAGCGTTTGCTTGTAAAGCCAACCCCTGCTGTGTTTCTCCGgTGCCGTTTACTCTGTTACCTTCCCAGTCGTCTGATGTCATTCACTTCCAGAATATTAACCACTCAGAGATACCAGAGTCCGTTCATCATAATGCAGACGCTCCTCCACAATACTGTGAAAGCAAACCGCATGAATAATGCATTGTATCACCttgagaaataataatactaatactacaaataaacaagatggtatattgaataaaaaatgtctGGACTTCCCATGTAACTAAGTCATCATATTTCAGTATGTGATAATTAAAGAGTAATGTATATGTTAATAATTTGTCAAGTACAACCATTATAATTAAATGAGAGGCTGAAAATAGCATTACTCTGCATGCAATTATCAATAGAACAGTGTATTTCAACGGTTTTGACGAATTTGATTGCTTTTTacctattttatatatttttatgatctAATTTTGGCCTGATTTATGGTCAAAAGTCCATGTGGCATCTGTTTCCTGTATTCATGACGCCGATGTGTGACCTCCTGTGACGAGATGTTCTTGCTTCTTACTGTTGGACCGACCCACCCCAGATTGCTTCATATCAAATGGTCAAAAAACAAACCATGCTGTAATAAAACAAGCGCTCTGGTTGTTCCACATCTTTGAATAAGAACAAGTATGACTGAGATGGGAGAAATTGTATTCGTTTGTTTTGGGTTGAAAGAGTCTTCCAGCCCTATTGTGAGCAATGTCTGGTGAACcgattaaaatgactaaacagTGAAAAGGTGA
>XM_043237419.1
ATTAAGACGctttcacaacacacacacacacacacacacacacacacacacacgtgtcccACCCACTTGTTAAAAGTGATCTGCTCTACTAAAGACTataagagcatttctgaccactGAGAAGCACGGATTACTTCTTCTCTTTGTTTATCGGTCCGTAGGAGGATGTCTCAGACGGTCATCCCCATGACTTCTTCAACCCTCGTCATCCAGCTGCAGCCGGCGACACAAGCAGCTTCTCCTCTTCAAGGCCTTCAGGCGTTTCTCAAAGGACAACCCAAAGCCCTCGGGACGGTCCAGGTAATGATCGGTGTGCTGACTCTCCTGATGGGCATCGTGTCTACGGTTTATGGAGAAATCATCATTACCTACACGGCTCTTCCTTACTGGGGATCTCTCAGCtACATCATCGCAGGCTCGTTCTGCATCGCCgcagaaaacaaaatcaattccCCCTCCAGTTTGTGTTTGGTGAATGCTTCACTGGGAACAAATGTTTTCAGTACTGTAGTCGCAGGCatcatcattatttttctttcactggATTTTGTCGTATGGCCACACGTTTATTGCCAAGATAACTGTCAATTGTTCACGAAAGACCATGAGATCTTCTACAATGGAATCAGAGGTGTGTATATGTTACTCAACGTGTCTGAGTTTATCATCTCTATCTGTCTGGCAGCGTTTGCTTGTAAAGCCAACCCCTGCTGTGTTTCTCCGgTGCCGTTTACTCTGTTACCTTCCCAGTCGTCTGATGTCATTCACTTCCAGAATATTAACCACTCAGAGATACCAGAGTCCGTTCATCATAATGCAGACGCTCCTCCACAATACTGTGAAAGCAAACCGCATGAATAATGCATTGTATCACCttgagaaataataatactaatactacaaataaacaagatggtatattgaataaaaaatgtctGGACTTCCCATGTAACTAAGTCATCATATTTCAGTATGTGATAATTAAAGAGTAATGTATATGTTAATAATTTGTCAAGTACAACCATTATAATTAAATGAGAGGCTGAAAATAGCATTACTCTGCATGCAATTATCAATAGAACAGTGTATTTCAACGGTTTTGACGAATTTGATTGCTTTTTacctattttatatatttttatgatctAATTTTGGCCTGATTTATGGTCAAAAGTCCATGTGGCATCTGTTTCCTGTATTCATGACGCCGATGTGTGACCTCCTGTGACGAGATGTTCTTGCTTCTTACTGTTGGACCGACCCACCCCAGATTGCTTCATATCAAATGGTCAAAAAACAAACCATGCTGTAATAAAACAAGCGCTCTGGTTGTTCCACATCTTTGAATAAGAACAAGTATGACTGAGATGGGAGAAATTGTATTCGTTTGTTTTGGGTTGAAAGAGTCTTCCAGCCCTATTGTGAGCAATGTCTGGTGAACcgattaaaatgactaaacagTGAAAAGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237418.1 True 1569 mRNA 0.41 9 24661884 24665576
XM_043237419.1 False 1472 mRNA 0.41 8 24661829 24665576

Neighbor

gene id symbol gene type direction distance location
LOC122343105 NA coding upstream 8614 24648967 ~ 24653215 (+)
LOC122342946 NA coding upstream 42438 24607037 ~ 24619391 (+)
LOC122342982 NA coding upstream 56012 24595853 ~ 24605817 (+)
LOC122343010 NA coding upstream 80035 24577163 ~ 24581794 (+)
LOC122343032 NA coding upstream 87397 24568994 ~ 24574432 (+)
LOC122343104 NA coding downstream 2130 24667706 ~ 24672151 (+)
LOC122342991 LOC107685875,LOC107570416,LOC107671223,LOC107749047,LOC107728228,LOC107569032 coding downstream 14346 24679922 ~ 24687980 (+)
LOC122342420 LOC107667978,LOC107563545 coding downstream 105056 24770632 ~ 24782341 (+)
zmp:0000000926 LOC107754864,LOC107661991,LOC107568831,LOC104958731 coding downstream 851820 25517396 ~ 25553833 (+)
l1camb LOC107661992,LOC107746188,LOC107598812,LOC107568828 coding downstream 907501 25573077 ~ 25609845 (+)
G30812 NA non-coding upstream 174942 24456022 ~ 24486887 (+)
LOC122343172 NA non-coding upstream 242261 24417843 ~ 24419568 (+)
G30819 NA non-coding upstream 347541 24310339 ~ 24314288 (+)
G30754 NA non-coding upstream 651938 24003642 ~ 24009891 (+)
G30751 LOC107671223,LOC107569100,LOC107575457,LOC107747635,LOC107679413,LOC107566978,LOC107670352 non-coding upstream 660265 23978432 ~ 24001564 (+)
G30877 NA non-coding downstream 49121 24714697 ~ 24714998 (+)
G31223 NA non-coding downstream 323291 24988867 ~ 24989274 (+)
G31226 NA non-coding downstream 648647 25314223 ~ 25314596 (+)
G31228 NA non-coding downstream 649603 25315179 ~ 25315553 (+)
G31380 NA non-coding downstream 1121804 25787380 ~ 25787901 (+)
LOC122343125 NA other upstream 15228 24639089 ~ 24646601 (+)
LOC122343159 NA other upstream 23175 24636352 ~ 24638654 (+)
LOC122343023 LOC107568558,LOC107685877,LOC107725785,LOC107728057 other upstream 190379 24465454 ~ 24471450 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other upstream 195429 24454270 ~ 24466400 (+)
LOC122342990 NA other upstream 520383 24133050 ~ 24141446 (+)
LOC122343086 NA other downstream 7315 24672891 ~ 24674412 (+)
G30882 NA other downstream 55848 24721424 ~ 24728447 (+)
LOC122342408 NA other downstream 78272 24743848 ~ 24767552 (+)
LOC122342771 ss18l1,LOC102784650 other downstream 969466 25635042 ~ 25688230 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other downstream 1028226 25693802 ~ 25695381 (+)

Expression


Co-expression Network