CI01000004_09779903_09780536



Basic Information


Item Value
gene id CI01000004_09779903_09780536
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 9779235 ~ 9780878 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000004_09779903_09780536.mRNA
ACGTCGCAGTCTATCTGAAACACAGGTCTCTTGTGTTTACCAAGGTAAAGGTGCCACACTTACAAGATGTTTTGAGTCTGAGGATGAGTTAATGGCATTGTCAAGTTGTAAAAGGGCCTTCAGGGTAGAACACACAATAAATATCAACTATGATACGAAAAAGAGTCTGTTTGACTTTGACAGCCTCTGCAAACTCTATTAACAACGTGTTTGTGATTTGCGTATTTGTCAGTCGTGGAAGTGACAAGTAAACAAGCACGCATGTAAACACGCACGCACAAAACAACCAGACGCAGAGACATTTGCATTGCAATGGGAGCTGCATTCCAGGGCTGAATCACAATGCTGAAGGGAGGCTGCTGTCTCGTAGGCTCCCGCGGAGCTCTTTACACAGGCCGTAAAACTGCGGTTCCCACGGCTTCTCCTCTGCCTCGTGAGGGGAACCCTAAACAAACACCTCACAATGCTGTTATGGGATTACAGGGGAACCTTTCCAGCTCCACTGTAAACGCCAGGGCCACACTGACACAAAGGTTAACAGGTGTTTTGTGCTATCTATTTGAACAGTCTGCACCAATTGACAAAGGAAGGACAAGCTGCAGTCTATCACGCGATGCTCTCGCAATTTGTGTGGCAAAAACACACGCTTTCACCGTCTTTATGGCCGACCAGGAAAAGCAGATTCTAAGTCAGTGGCACAACATTGCTTCCAGATCACATTATGGCCTCTCTCGTTACGTAATTAAGAGGACCCATCTGGTACGGGCAGCGCTCCCTGACACTAATTGTGTTGGTGTGCACATGGCCATCCCATTGAGCAAAAAAAGACCTCCAACATTTGAATCCATTATCTCCTACTGTTCAGATTAAGGCGCACATGTTTCCAGGGAGATTATGGTGCAGGGTCGGGGGACGCCTGTGTCTTGTGGGGTCGAGACTTGAGGATTAAGTCTATGGTGTTGGTTAAGCACTTCCAGCAATCTAGTCACATGCCGGGAGTATGTTACAATGTGCTGTGTTATAACAAGTGACTCTTATATGTGTGTGTAGAGTTAATCGGTTTTTACTGATATTCATACTTTTCATACTTTTTAGCTTAATCAGTTAGGGGGTTCTTTAACATTGGGCCTGTTTGGCAAGTCTCTAAAGAATAGCACCCAATAATAGGTAATGTAATTTAATGTACTATTTTGATGATTTATAATACTAATGATAATAATTATTATTATTATAGCAAAATATATGGCATTTTGTTCATAATAATAATAATAATTATTATTATCATTATTACTGTTGTTATTGTTAGCTAAATTATGTGCATTATATTTTTGTTATAATAACAATAATTATTCTTATTGCAAATTAAAATAAAAAAAATAAAAGTGATACAAATAATAATAAAAAGTGATTTAATGTTATTGTTATAATTAACACAGCACAATCATATTAATTATATTTTATCATAATAATAATTATAATAAAAATAATAATGCATATGTTGTAGACTTAGATCATTTGTGTCAAATAGCAGAAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000004_09779903_09780536.mRNA True 1538 mRNA 0.38 2 9779235 9780878

Neighbor


gene id symbol gene type direction distance location
CI01000004_09754664_09774588 CDH6 coding downstream 4162 9753467 ~ 9775073 (-)
CI01000004_09703159_09711600 NA coding downstream 67237 9701926 ~ 9711998 (-)
CI01000004_09639469_09656035 NA coding downstream 123200 9638825 ~ 9656035 (-)
CI01000004_09616639_09622200 RNF31 coding downstream 156575 9616639 ~ 9622660 (-)
CI01000004_09609822_09616099 RNF31 coding downstream 163136 9609575 ~ 9616099 (-)
CI01000004_10271350_10272027 NA coding upstream 490320 10271198 ~ 10272206 (-)
CI01000004_10290550_10295288 CAHZ coding upstream 508985 10289863 ~ 10295357 (-)
CI01000004_10436514_10438365 NA coding upstream 655621 10436499 ~ 10439459 (-)
CI01000004_10458668_10465442 NA coding upstream 677784 10458662 ~ 10465703 (-)
CI01000004_10553379_10573352 PAXIP1 coding upstream 772159 10553037 ~ 10575243 (-)
G30412 NA non-coding downstream 30675 9748346 ~ 9748560 (-)
G30377 NA non-coding downstream 89729 9689274 ~ 9689506 (-)
G30376 NA non-coding downstream 90119 9688891 ~ 9689116 (-)
G30370 NA non-coding downstream 120175 9658748 ~ 9659060 (-)
G30369 NA non-coding downstream 120713 9657924 ~ 9658522 (-)
G30432 NA non-coding upstream 16496 9797374 ~ 9797603 (-)
G30448 NA non-coding upstream 34980 9815858 ~ 9816154 (-)
G30572 NA non-coding upstream 84419 9865297 ~ 9866231 (-)
G30593 NA non-coding upstream 108651 9889529 ~ 9889756 (-)
G30600 NA non-coding upstream 116258 9897136 ~ 9897400 (-)
G30316 NA other downstream 372314 9377937 ~ 9406921 (-)
G29746 NA other downstream 1421108 8354498 ~ 8358127 (-)
G29656 NA other downstream 1813735 7964364 ~ 7965500 (-)
G29388 NA other downstream 3147328 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 3233663 6538904 ~ 6541252 (-)
G31203 NA other upstream 965559 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 1626587 11406957 ~ 11412907 (-)
G32150 NA other upstream 1995641 11776519 ~ 11780951 (-)
G32207 NA other upstream 2595290 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 4769922 14541515 ~ 14551352 (-)

Expression



Co-expression Network