spra (LOC107597947)


Basic Information

Item Value
gene id spra
gene name LOC107597947
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 17927787 ~ 17932419 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237427.1
CCTGTCATCTTCCGGGGGCGTGGCGGATCGCTCGCGTCGCGTGTGTCTGGAGAGATGAGCGCCGCGTCGGGTTTCGGTAAAGCGCTGGTCATCATCACCGGAGCGTCGAAGGGCTTCGGCCGGGCTCTAGCGCTGTCCATCGCGCCGCGTCTGTCCGCGGGCTCCGTGATGATCCTCGCGGCGCGCTCCGACGACCTGCTGCGGCAGCTGAAGGCGGATCTGAGCCGCCTTCACCCCGCGCTGACGCTCCGCTGCGCCGCCGCTGATCTGAGCTGCCAGGCGGGCGTCGAGAGCGTCATCGCCGCGGTCTCTCTCAGCGTCACGGACGTCGAGCGTCTGCTGCTCTTCAATAACGCGGCGTCTCTGGGCGACGTGTCTCGGTTCTGCTCCGGGTTCACGGACGTGTCGGAGGTCAACTCGTACCTGTCTCTGAACGTGAGCTCGGCTCTGTGTCTGACGGCCGGGGTTCTGCGAGCGGTCCCGCGCCGCTCCGGTCTGACCCGGGTCGTGGTCAACATCAGCTCTCTGTGTGCGCTGAGGCCCTTCCCGTCCTGGGTTCTGTACTGCAGCGGGAAAGCGGCTCGGGACATGATGTTCCGTGTGTTATCTGAGGAAGAACCGGACCTCCGGGTCCTGAACTACGCTCCAGgtCCTCTGGACACAGACATGCAGCTGCAGGCGAGGAGCAGGTCTGCAGACGTGTCTCTCAGGAAGTCGTTCAGTGTGATGCACGCTGAGGGTCAGTTGTTGTCGTGTGAGGAGTCCATCAGTAAACTCACGCAGGTCCTGCTGGACGACACCTTCACCTCCGGAGCACACCTGGACTTCTATGACTTATAGCTGACTTCTGTTCAATACTGGAAAACCCGaagagcacaaaaccagtcataatcATCCTTTTATTCACAGATATATATTCTTGATCTGAATAAATCATCTGTCCAGTGA

Function

NR:

description
PREDICTED: sepiapterin reductase

GO:

id name namespace
GO:0006729 tetrahydrobiopterin biosynthetic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0004757 sepiapterin reductase activity molecular_function

KEGG:

id description
K00072 SPR; sepiapterin reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237427.1 True 948 mRNA 0.61 3 17927787 17932419

Neighbor

gene id symbol gene type direction distance location
smyd1a smyd1,LOC107745315,LOC107597934 coding downstream 1090 17915571 ~ 17926697 (-)
thnsl2 thnsl2,LOC107597948,LOC107578849,LOC107735618 coding downstream 15355 17903576 ~ 17912432 (-)
dqx1 dqx1,LOC107597950 coding downstream 28920 17884719 ~ 17898867 (-)
LOC122342984 LOC100150651,LOC107755845,LOC107668749,LOC107599606 coding downstream 46991 17854701 ~ 17880796 (-)
ckap2l NA coding downstream 76638 17840064 ~ 17851149 (-)
rab14l Rab14,rab14,LOC105889591,LOC107566859,LOC101069277,LOC103390174,LOC103045876,LOC107670386,LOC107674917,LOC107729136 coding upstream 31170 17963589 ~ 17969568 (-)
tbx5a tbx5,LOC107670381,LOC107729059,LOC107745406,LOC107688016 coding upstream 96079 18028498 ~ 18041948 (-)
tbx3a LOC107742157,LOC107597930,LOC107687999,LOC107728866,LOC107566860,LOC107670392 coding upstream 126906 18059325 ~ 18067165 (-)
LOC122343062 NA coding upstream 260890 18193309 ~ 18196521 (-)
mtfp1 mtfp1,LOC107565646,LOC107566856 coding upstream 266631 18199050 ~ 18202131 (-)
LOC122343170 NA non-coding downstream 97844 17828586 ~ 17829943 (-)
G29445 NA non-coding downstream 103523 17823219 ~ 17824264 (-)
G29442 LOC107599601 non-coding downstream 105317 17819360 ~ 17822470 (-)
G29440 NA non-coding downstream 109854 17817562 ~ 17817933 (-)
G29425 NA non-coding downstream 122378 17796072 ~ 17805409 (-)
G29487 NA non-coding upstream 52594 17985013 ~ 17985818 (-)
G29656 NA non-coding upstream 448571 18380990 ~ 18409895 (-)
G29662 NA non-coding upstream 503226 18435645 ~ 18465837 (-)
G29663 NA non-coding upstream 504148 18436567 ~ 18461313 (-)
G29680 LOC107747644,LOC107709964,LOC107690747,LOC107687572,LOC107562152 non-coding upstream 624081 18556500 ~ 18559281 (-)
LOC122342228 scgn,LOC107693759,LOC107757885,LOC107669120,LOC107714763,LOC107747999,LOC107663245 other downstream 183244 17734606 ~ 17744543 (-)
G29417 NA other downstream 191513 17735350 ~ 17736274 (-)
srd5a3 srd5a3,LOC107755245,LOC107683999,LOC107665336,LOC107601910 other downstream 289045 17637023 ~ 17638742 (-)
xrcc3 xrcc3,LOC107755221,LOC107683971,LOC107560377 other downstream 805658 17118343 ~ 17122129 (-)
G29135 NA other downstream 909964 17006927 ~ 17017823 (-)
G29473 NA other upstream 38186 17970605 ~ 17979922 (-)
G29653 LOC107663329,LOC107575399,LOC107749046,LOC107758217,LOC107576964,LOC107665206,LOC107571858,LOC107671223,LOC107576424 other upstream 476141 18408560 ~ 18428343 (-)
LOC122343054 NA other upstream 722825 18655244 ~ 18661653 (-)
LOC122342944 LOC107581743 other upstream 760583 18693002 ~ 18735640 (-)
LOC122343082 NA other upstream 966388 18898807 ~ 18902552 (-)

Expression


Co-expression Network